Wall clock time and date at job start Sun Mar 7 2021 13:21:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39285 * 121.03348 * 2 1 4 4 C 1.46490 * 134.20268 * 359.97438 * 3 2 1 5 5 C 1.50696 * 126.59995 * 359.97166 * 4 3 2 6 6 O 1.42898 * 109.47248 * 285.00270 * 5 4 3 7 7 Si 1.86302 * 109.46964 * 165.00410 * 5 4 3 8 8 C 1.34185 * 106.80311 * 179.97438 * 4 3 2 9 9 N 1.36954 * 109.95002 * 359.97438 * 8 4 3 10 10 C 1.37158 * 110.11133 * 0.02562 * 9 8 4 11 11 N 1.32821 * 132.95978 * 180.02562 * 10 9 8 12 12 C 1.31310 * 121.88713 * 179.71931 * 11 10 9 13 13 C 1.39753 * 121.02608 * 179.97438 * 2 1 3 14 14 C 1.47666 * 120.45473 * 0.02562 * 13 2 1 15 15 O 1.21575 * 119.99929 * 354.19290 * 14 13 2 16 16 N 1.34779 * 119.99657 * 174.19293 * 14 13 2 17 17 C 1.46499 * 119.99552 * 179.97438 * 16 14 13 18 18 C 1.52998 * 109.47107 * 180.02562 * 17 16 14 19 19 H 1.09002 * 112.85123 * 314.66594 * 18 17 16 20 20 C 1.53781 * 113.61692 * 85.85899 * 18 17 16 21 21 C 1.53957 * 87.01896 * 139.95492 * 20 18 17 22 22 H 1.08998 * 113.74432 * 220.06109 * 21 20 18 23 23 N 1.46498 * 113.53929 * 89.18831 * 21 20 18 24 24 C 1.34436 * 126.82372 * 347.50859 * 23 21 20 25 25 N 1.30825 * 108.07804 * 179.97438 * 24 23 21 26 26 C 1.33241 * 109.82973 * 0.02562 * 25 24 23 27 27 N 1.30715 * 108.94777 * 359.75322 * 26 25 24 28 28 C 1.53780 * 113.61730 * 183.47336 * 18 17 16 29 29 H 1.09001 * 109.47134 * 263.78878 * 1 2 3 30 30 H 1.09004 * 109.47132 * 23.78294 * 1 2 3 31 31 H 1.09004 * 109.47593 * 143.78494 * 1 2 3 32 32 H 1.08994 * 109.47194 * 45.00099 * 5 4 3 33 33 H 0.96706 * 114.00373 * 180.02562 * 6 5 4 34 34 H 1.48498 * 110.00052 * 298.68037 * 7 5 4 35 35 H 1.48501 * 110.00193 * 60.00205 * 7 5 4 36 36 H 1.07995 * 125.02656 * 180.02562 * 8 4 3 37 37 H 0.96995 * 124.93888 * 180.02562 * 9 8 4 38 38 H 1.08007 * 119.30929 * 180.27304 * 12 11 10 39 39 H 0.96995 * 120.00011 * 0.02562 * 16 14 13 40 40 H 1.08995 * 109.47281 * 60.00013 * 17 16 14 41 41 H 1.09003 * 109.47449 * 299.99739 * 17 16 14 42 42 H 1.08993 * 113.61495 * 254.53151 * 20 18 17 43 43 H 1.09001 * 113.61120 * 25.43871 * 20 18 17 44 44 H 1.07998 * 125.95710 * 359.97438 * 24 23 21 45 45 H 1.08003 * 125.52488 * 180.02562 * 26 25 24 46 46 H 1.09006 * 113.61060 * 334.55945 * 28 18 17 47 47 H 1.08998 * 113.61885 * 105.38418 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6100 -0.0005 5 6 0.4529 3.1705 -0.0017 6 8 -0.1179 3.0239 -1.3035 7 14 0.5072 4.9765 0.4526 8 6 2.9950 3.3125 0.0004 9 7 4.0671 2.4602 0.0019 10 6 3.6348 1.1586 0.0015 11 7 4.2720 -0.0068 0.0030 12 6 3.6265 -1.1503 0.0077 13 6 2.2273 -1.1976 0.0005 14 6 1.5223 -2.4951 0.0005 15 8 0.3116 -2.5290 0.1066 16 7 2.2209 -3.6416 -0.1170 17 6 1.5215 -4.9289 -0.1165 18 6 2.5390 -6.0622 -0.2613 19 1 3.2809 -5.8686 -1.0360 20 6 3.1486 -6.5174 1.0752 21 6 3.0419 -7.9574 0.5413 22 1 2.7231 -8.6812 1.2914 23 7 4.2251 -8.3943 -0.2040 24 6 5.2303 -7.6190 -0.6464 25 7 6.0927 -8.3852 -1.2635 26 6 5.6741 -9.6499 -1.2363 27 7 4.5370 -9.7069 -0.5940 28 6 1.8983 -7.4569 -0.3568 29 1 -0.3633 -0.1112 1.0216 30 1 -0.3633 0.9404 -0.4144 31 1 -0.3634 -0.8291 -0.6072 32 1 -0.1553 2.6313 0.7244 33 1 -1.0199 3.3644 -1.3782 34 1 1.0694 5.1402 1.8173 35 1 1.3334 5.7229 -0.5300 36 1 3.0602 4.3905 0.0007 37 1 4.9967 2.7370 0.0031 38 1 4.1868 -2.0737 0.0132 39 1 3.1868 -3.6145 -0.2013 40 1 0.8198 -4.9614 -0.9498 41 1 0.9780 -5.0467 0.8210 42 1 4.1745 -6.1809 1.2243 43 1 2.5087 -6.3223 1.9358 44 1 5.3118 -6.5501 -0.5152 45 1 6.1926 -10.4920 -1.6703 46 1 0.9160 -7.5192 0.1116 47 1 1.9151 -7.8772 -1.3624 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946164_12890568.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:21:30 Heat of formation + Delta-G solvation = 139.961234 kcal Electronic energy + Delta-G solvation = -32459.531356 eV Core-core repulsion = 28034.072604 eV Total energy + Delta-G solvation = -4425.458751 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.159 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.22816 -42.87748 -41.11084 -40.21823 -38.69182 -37.78356 -36.02442 -34.88996 -33.38628 -32.16551 -32.07148 -31.35471 -29.24511 -28.52389 -27.24650 -26.49593 -25.37717 -24.49006 -23.81763 -23.06955 -22.44481 -21.86913 -20.84945 -20.35020 -19.26937 -18.83691 -18.41458 -18.05497 -17.80652 -17.22096 -16.88792 -16.70206 -16.55894 -16.25495 -16.08563 -15.67700 -15.63471 -15.37853 -15.22029 -15.06052 -14.78389 -14.71669 -14.23727 -14.13111 -13.88823 -13.81062 -13.73907 -13.59513 -13.35427 -13.18750 -13.03667 -12.83755 -12.63938 -12.38153 -12.01617 -11.93968 -11.84998 -11.10501 -11.00918 -10.98100 -10.77699 -10.63719 -10.41610 -10.21820 -10.17800 -9.62441 -9.18570 -5.09832 -0.27046 -0.09358 0.61035 1.17589 1.19513 1.29464 1.55267 1.58996 1.86459 1.88417 1.99537 2.01196 2.81200 2.85818 3.02740 3.20427 3.28926 3.31158 3.33858 3.38538 3.49470 3.65357 3.72631 3.78644 3.80138 3.90943 4.00615 4.02080 4.08008 4.14588 4.26081 4.31330 4.37820 4.41127 4.44857 4.56514 4.61930 4.65422 4.71148 4.73652 4.89052 4.90896 5.00685 5.15064 5.27493 5.28002 5.37523 5.45006 5.51786 5.72986 5.79483 6.05170 6.37904 6.62067 6.81240 7.10542 7.17718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.087 3.913 3 C -0.148 4.148 4 C -0.132 4.132 5 C -0.041 4.041 6 O -0.544 6.544 7 Si 0.687 3.313 8 C 0.064 3.936 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.502 5.502 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.528 6.528 16 N -0.729 5.729 17 C 0.133 3.867 18 C -0.131 4.131 19 H 0.100 0.900 20 C -0.138 4.138 21 C 0.128 3.872 22 H 0.117 0.883 23 N -0.363 5.363 24 C 0.252 3.748 25 N -0.544 5.544 26 C 0.199 3.801 27 N -0.315 5.315 28 C -0.133 4.133 29 H 0.082 0.918 30 H 0.080 0.920 31 H 0.099 0.901 32 H 0.076 0.924 33 H 0.381 0.619 34 H -0.254 1.254 35 H -0.251 1.251 36 H 0.177 0.823 37 H 0.426 0.574 38 H 0.162 0.838 39 H 0.399 0.601 40 H 0.075 0.925 41 H 0.076 0.924 42 H 0.083 0.917 43 H 0.115 0.885 44 H 0.215 0.785 45 H 0.219 0.781 46 H 0.110 0.890 47 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.550 4.170 2.279 5.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.079 3.921 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.152 4.152 6 O -0.350 6.350 7 Si 0.587 3.413 8 C -0.062 4.062 9 N -0.174 5.174 10 C 0.076 3.924 11 N -0.215 5.215 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.361 3.639 15 O -0.406 6.406 16 N -0.382 5.382 17 C 0.009 3.991 18 C -0.149 4.149 19 H 0.118 0.882 20 C -0.176 4.176 21 C 0.025 3.975 22 H 0.135 0.865 23 N -0.153 5.153 24 C -0.045 4.045 25 N -0.270 5.270 26 C -0.104 4.104 27 N -0.142 5.142 28 C -0.171 4.171 29 H 0.100 0.900 30 H 0.099 0.901 31 H 0.118 0.882 32 H 0.094 0.906 33 H 0.229 0.771 34 H -0.179 1.179 35 H -0.176 1.176 36 H 0.194 0.806 37 H 0.265 0.735 38 H 0.179 0.821 39 H 0.234 0.766 40 H 0.093 0.907 41 H 0.094 0.906 42 H 0.102 0.898 43 H 0.133 0.867 44 H 0.231 0.769 45 H 0.235 0.765 46 H 0.128 0.872 47 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.466 4.174 2.472 5.068 hybrid contribution 0.549 -0.179 0.012 0.578 sum -0.917 3.995 2.483 4.792 Atomic orbital electron populations 1.21252 0.88799 1.04876 1.03803 1.19904 0.97222 0.89061 0.85957 1.19451 0.92815 0.93384 1.09825 1.19538 0.93179 0.90659 1.10586 1.24034 0.91415 1.10902 0.88813 1.86543 1.33873 1.85664 1.28929 0.94928 0.90424 0.76086 0.79839 1.21633 0.85360 0.95624 1.03579 1.41470 1.09510 1.02741 1.63721 1.18467 0.89294 0.85835 0.98803 1.66438 1.40513 0.95954 1.18642 1.22501 0.90082 0.94409 0.91824 1.20414 0.94739 0.93734 1.15329 1.17835 0.86789 0.83195 0.76095 1.90763 1.13488 1.87029 1.49297 1.45848 1.10716 1.05730 1.75880 1.21333 0.94185 0.80439 1.03094 1.22995 0.98880 0.94827 0.98240 0.88156 1.23588 1.03341 0.92332 0.98341 1.22232 0.83584 0.97386 0.94345 0.86496 1.50253 1.18062 1.05151 1.41877 1.25966 0.84993 0.99752 0.93760 1.70604 1.29979 1.02535 1.23930 1.26110 0.91573 0.95540 0.97154 1.78115 1.18268 0.97571 1.20250 1.23354 0.98230 0.94032 1.01529 0.89998 0.90096 0.88237 0.90647 0.77102 1.17886 1.17578 0.80575 0.73519 0.82060 0.76626 0.90695 0.90567 0.89823 0.86721 0.76882 0.76481 0.87166 0.89913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.29 8.46 36.00 0.30 0.02 16 2 C 0.09 0.27 5.98 -103.67 -0.62 -0.35 16 3 C -0.15 -0.50 6.16 -105.13 -0.65 -1.15 16 4 C -0.13 -0.26 5.61 -102.73 -0.58 -0.83 16 5 C -0.04 0.03 1.87 36.00 0.07 0.09 16 6 O -0.54 0.23 11.65 -35.23 -0.41 -0.18 16 7 Si 0.69 -1.62 30.80 -169.99 -5.24 -6.86 16 8 C 0.06 0.04 10.44 -16.69 -0.17 -0.13 16 9 N -0.57 -0.41 6.04 -12.12 -0.07 -0.49 16 10 C 0.31 0.97 8.42 -155.71 -1.31 -0.34 16 11 N -0.50 -1.41 10.37 -11.96 -0.12 -1.53 16 12 C 0.18 0.12 10.67 -17.11 -0.18 -0.06 16 13 C -0.23 -0.43 5.89 -104.82 -0.62 -1.05 16 14 C 0.57 0.81 7.72 -12.41 -0.10 0.71 16 15 O -0.53 -2.28 13.49 5.30 0.07 -2.21 16 16 N -0.73 1.61 5.51 -61.31 -0.34 1.27 16 17 C 0.13 -0.39 5.50 -4.04 -0.02 -0.41 16 18 C -0.13 0.61 3.34 -89.81 -0.30 0.31 16 19 H 0.10 -0.48 7.03 -51.93 -0.36 -0.85 16 20 C -0.14 0.71 6.90 -25.83 -0.18 0.53 16 21 C 0.13 -0.36 5.22 -67.02 -0.35 -0.71 16 22 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 23 N -0.36 -0.08 3.81 -55.23 -0.21 -0.29 16 24 C 0.25 -0.04 10.82 -90.65 -0.98 -1.02 16 25 N -0.54 -1.47 11.19 -15.83 -0.18 -1.65 16 26 C 0.20 0.44 13.03 -91.81 -1.20 -0.76 16 27 N -0.32 -0.94 12.70 29.29 0.37 -0.56 16 28 C -0.13 0.48 7.44 -25.92 -0.19 0.29 16 29 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 30 H 0.08 0.11 4.79 -51.93 -0.25 -0.14 16 31 H 0.10 0.34 5.94 -51.93 -0.31 0.03 16 32 H 0.08 -0.13 7.13 -51.93 -0.37 -0.50 16 33 H 0.38 -2.06 8.74 45.56 0.40 -1.66 16 34 H -0.25 -0.05 7.11 56.52 0.40 0.36 16 35 H -0.25 -0.02 7.04 56.52 0.40 0.38 16 36 H 0.18 -0.31 6.31 -52.49 -0.33 -0.64 16 37 H 0.43 -0.86 8.96 -40.82 -0.37 -1.22 16 38 H 0.16 -0.55 6.43 -52.48 -0.34 -0.88 16 39 H 0.40 -1.89 6.55 -40.82 -0.27 -2.16 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.08 -0.19 7.87 -51.93 -0.41 -0.60 16 42 H 0.08 -0.48 7.02 -51.93 -0.36 -0.84 16 43 H 0.11 -0.67 7.92 -51.93 -0.41 -1.08 16 44 H 0.21 -0.93 6.75 -52.49 -0.35 -1.28 16 45 H 0.22 -0.21 8.06 -52.48 -0.42 -0.63 16 46 H 0.11 -0.52 8.10 -51.93 -0.42 -0.94 16 47 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 LS Contribution 383.33 15.07 5.78 5.78 Total: 0.00 -13.49 383.33 -12.89 -26.38 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -5.47 Total: -14.80 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -7.07 Total: -4.86 kcal Atomic # 7 Polarization: -2.70 SS G_CDS: -0.55 Total: -3.25 kcal Atomic # 8 Polarization: -2.05 SS G_CDS: -0.34 Total: -2.39 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.24 Total: -6.86 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -13.49 -12.89 -26.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_12890568.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 166.345 kcal (2) G-P(sol) polarization free energy of solvation -13.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 152.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.384 kcal (6) G-S(sol) free energy of system = (1) + (5) 139.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds