Wall clock time and date at job start Sun Mar 7 2021 13:22:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38973 * 119.95580 * 2 1 4 4 O 1.35709 * 119.91174 * 0.03910 * 3 2 1 5 5 C 1.39021 * 120.17708 * 180.02562 * 3 2 1 6 6 C 1.50698 * 119.95272 * 179.97438 * 5 3 2 7 7 O 1.42900 * 109.47196 * 75.00309 * 6 5 3 8 8 Si 1.86304 * 109.46991 * 194.99742 * 6 5 3 9 9 C 1.37680 * 120.08722 * 0.02562 * 5 3 2 10 10 C 1.39754 * 119.90905 * 359.68218 * 9 5 3 11 11 C 1.47606 * 120.08630 * 180.31893 * 10 9 5 12 12 O 1.21583 * 119.99901 * 0.27457 * 11 10 9 13 13 N 1.34771 * 119.99905 * 180.28056 * 11 10 9 14 14 C 1.46503 * 120.00001 * 179.97438 * 13 11 10 15 15 C 1.52994 * 109.47155 * 179.97438 * 14 13 11 16 16 H 1.08991 * 112.84880 * 45.33732 * 15 14 13 17 17 C 1.53788 * 113.61165 * 176.53116 * 15 14 13 18 18 C 1.53777 * 87.07784 * 139.98608 * 17 15 14 19 19 H 1.09008 * 113.60962 * 220.01761 * 18 17 15 20 20 N 1.46501 * 113.62015 * 89.20408 * 18 17 15 21 21 C 1.34429 * 126.81757 * 274.70514 * 20 18 17 22 22 N 1.30834 * 108.07789 * 179.89339 * 21 20 18 23 23 C 1.33238 * 109.82556 * 0.37859 * 22 21 20 24 24 N 1.30715 * 108.94766 * 359.76769 * 23 22 21 25 25 C 1.53781 * 113.61730 * 274.13690 * 15 14 13 26 26 C 1.37726 * 119.95713 * 180.02562 * 2 1 3 27 27 H 1.09005 * 109.47594 * 269.98141 * 1 2 3 28 28 H 1.08999 * 109.47434 * 29.98428 * 1 2 3 29 29 H 1.09001 * 109.47343 * 149.97952 * 1 2 3 30 30 H 0.96699 * 114.00339 * 90.00441 * 4 3 2 31 31 H 1.09002 * 109.47796 * 314.99878 * 6 5 3 32 32 H 0.96704 * 114.00122 * 59.99485 * 7 6 5 33 33 H 1.48498 * 110.00164 * 180.02562 * 8 6 5 34 34 H 1.48505 * 110.00034 * 301.32282 * 8 6 5 35 35 H 1.08006 * 120.04201 * 179.97438 * 9 5 3 36 36 H 0.96997 * 120.00334 * 359.97438 * 13 11 10 37 37 H 1.08998 * 109.47328 * 299.99949 * 14 13 11 38 38 H 1.09007 * 109.47270 * 59.99589 * 14 13 11 39 39 H 1.09006 * 113.60924 * 254.52862 * 17 15 14 40 40 H 1.08996 * 113.61803 * 25.43377 * 17 15 14 41 41 H 1.08006 * 125.96437 * 0.03972 * 21 20 18 42 42 H 1.07998 * 125.52783 * 179.73090 * 23 22 21 43 43 H 1.09007 * 113.61189 * 334.56678 * 25 15 14 44 44 H 1.08994 * 113.61680 * 105.47133 * 25 15 14 45 45 H 1.08002 * 120.04103 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3778 0.0008 5 6 3.5911 1.2095 -0.0005 6 6 4.3384 2.5181 -0.0011 7 8 4.2724 3.1049 1.3002 8 14 6.1196 2.2157 -0.4563 9 6 4.2859 0.0208 -0.0016 10 6 3.5917 -1.1921 0.0046 11 6 4.3327 -2.4687 0.0106 12 8 5.5485 -2.4659 0.0152 13 7 3.6615 -3.6374 0.0108 14 6 4.3970 -4.9045 0.0162 15 6 3.4054 -6.0696 0.0159 16 1 2.5957 -5.9361 -0.7013 17 6 4.0777 -7.4505 -0.0639 18 6 3.0292 -7.9324 0.9526 19 1 3.4318 -8.6061 1.7090 20 7 1.8020 -8.4400 0.3340 21 6 0.7375 -7.7172 -0.0554 22 7 -0.1472 -8.5375 -0.5614 23 6 0.3112 -9.7873 -0.5049 24 7 1.5013 -9.7789 0.0356 25 6 2.9244 -6.4695 1.4207 26 6 2.1947 -1.1933 -0.0005 27 1 -0.3634 -0.0003 1.0277 28 1 -0.3634 0.8901 -0.5136 29 1 -0.3634 -0.8898 -0.5141 30 1 1.3227 2.7177 0.8844 31 1 3.8874 3.1939 -0.7278 32 1 4.6565 2.5572 1.9986 33 1 6.8677 3.4985 -0.4598 34 1 6.7371 1.2708 0.5087 35 1 5.3659 0.0259 -0.0024 36 1 2.6916 -3.6397 0.0074 37 1 5.0269 -4.9628 -0.8715 38 1 5.0207 -4.9588 0.9085 39 1 3.9878 -7.9239 -1.0416 40 1 5.0972 -7.4627 0.3214 41 1 0.6321 -6.6458 0.0318 42 1 -0.2154 -10.6651 -0.8493 43 1 3.6282 -6.2131 2.2127 44 1 1.9049 -6.1522 1.6400 45 1 1.6546 -2.1286 -0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946164_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:22:03 Heat of formation + Delta-G solvation = 44.414411 kcal Electronic energy + Delta-G solvation = -29505.593430 eV Core-core repulsion = 25300.150987 eV Total energy + Delta-G solvation = -4205.442443 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.27732 -41.78749 -40.84017 -40.00524 -37.98625 -37.57611 -35.94790 -34.11055 -33.43980 -32.24228 -31.94056 -29.21015 -28.14631 -27.30690 -26.91622 -25.61394 -24.26160 -23.13998 -22.55885 -22.11779 -21.62956 -20.79595 -19.67226 -18.94407 -18.15359 -18.10556 -17.65187 -17.03065 -16.82581 -16.61436 -16.49685 -16.21224 -16.07592 -15.85124 -15.76294 -15.54461 -15.15421 -14.88047 -14.70642 -14.54562 -14.18644 -14.10226 -13.92003 -13.87821 -13.44412 -13.36928 -13.10958 -13.06127 -12.82924 -12.48130 -12.43387 -12.00393 -11.93914 -11.77123 -11.70228 -11.06265 -11.02891 -10.82447 -10.67499 -10.63177 -10.31149 -10.07493 -9.72880 -4.96297 -0.45483 -0.00883 0.56232 1.12422 1.23185 1.58067 1.59358 1.89256 1.93672 1.96389 2.50511 2.79645 2.96161 3.02110 3.21576 3.25426 3.27248 3.31937 3.40915 3.48563 3.60820 3.73851 3.83627 3.87107 3.95456 4.08113 4.11293 4.23566 4.25747 4.31267 4.35099 4.43570 4.47786 4.50371 4.55506 4.57390 4.63454 4.66761 4.82905 4.93035 4.99996 5.03146 5.19375 5.20661 5.23129 5.40391 5.45870 5.74432 6.26907 6.30021 6.51192 7.04485 7.05731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.162 3.838 4 O -0.488 6.488 5 C -0.147 4.147 6 C -0.067 4.067 7 O -0.528 6.528 8 Si 0.684 3.316 9 C -0.054 4.054 10 C -0.140 4.140 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.727 5.727 14 C 0.131 3.869 15 C -0.131 4.131 16 H 0.100 0.900 17 C -0.132 4.132 18 C 0.128 3.872 19 H 0.117 0.883 20 N -0.363 5.363 21 C 0.251 3.749 22 N -0.543 5.543 23 C 0.199 3.801 24 N -0.315 5.315 25 C -0.138 4.138 26 C -0.065 4.065 27 H 0.073 0.927 28 H 0.078 0.922 29 H 0.071 0.929 30 H 0.399 0.601 31 H 0.124 0.876 32 H 0.375 0.625 33 H -0.253 1.253 34 H -0.255 1.255 35 H 0.145 0.855 36 H 0.400 0.600 37 H 0.076 0.924 38 H 0.076 0.924 39 H 0.083 0.917 40 H 0.110 0.890 41 H 0.214 0.786 42 H 0.219 0.781 43 H 0.114 0.886 44 H 0.083 0.917 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.132 -0.225 1.317 2.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.118 4.118 3 C 0.117 3.883 4 O -0.299 6.299 5 C -0.148 4.148 6 C -0.177 4.177 7 O -0.334 6.334 8 Si 0.585 3.415 9 C -0.072 4.072 10 C -0.143 4.143 11 C 0.349 3.651 12 O -0.408 6.408 13 N -0.379 5.379 14 C 0.007 3.993 15 C -0.149 4.149 16 H 0.118 0.882 17 C -0.171 4.171 18 C 0.025 3.975 19 H 0.135 0.865 20 N -0.153 5.153 21 C -0.045 4.045 22 N -0.270 5.270 23 C -0.103 4.103 24 N -0.142 5.142 25 C -0.176 4.176 26 C -0.084 4.084 27 H 0.091 0.909 28 H 0.097 0.903 29 H 0.090 0.910 30 H 0.257 0.743 31 H 0.142 0.858 32 H 0.222 0.778 33 H -0.177 1.177 34 H -0.180 1.180 35 H 0.163 0.837 36 H 0.235 0.765 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.101 0.899 40 H 0.129 0.871 41 H 0.231 0.769 42 H 0.236 0.764 43 H 0.133 0.867 44 H 0.101 0.899 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.484 -0.289 0.651 0.861 hybrid contribution -0.806 0.109 1.660 1.848 sum -1.290 -0.181 2.311 2.653 Atomic orbital electron populations 1.20742 0.89671 1.03928 1.02823 1.20219 0.97334 0.92081 1.02144 1.18317 0.88781 0.85320 0.95926 1.84664 1.75618 1.35675 1.33971 1.20576 0.93830 0.95850 1.04586 1.24903 1.10536 0.93839 0.88390 1.86617 1.82781 1.47652 1.16381 0.94682 0.74291 0.81269 0.91238 1.21160 1.00882 0.90246 0.94920 1.19781 0.93438 0.93349 1.07703 1.18139 0.87208 0.83561 0.76228 1.90827 1.13311 1.87515 1.49165 1.45856 1.10383 1.05586 1.76102 1.21369 0.93870 0.80694 1.03324 1.22992 0.99347 0.94778 0.97801 0.88150 1.23356 0.99000 0.94214 1.00568 1.22221 0.82719 0.96275 0.96325 0.86478 1.50245 1.14642 1.04857 1.45598 1.25950 0.83860 1.00134 0.94585 1.70607 1.30906 1.01192 1.24305 1.26117 0.90704 0.96287 0.97225 1.78122 1.17995 0.95680 1.22357 1.23586 1.03874 0.92324 0.97817 1.21085 0.92544 0.97782 0.97015 0.90870 0.90324 0.90992 0.74282 0.85804 0.77765 1.17741 1.17972 0.83746 0.76467 0.90561 0.90541 0.89850 0.87140 0.76942 0.76446 0.86738 0.89853 0.85095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.35 9.78 36.00 0.35 0.70 16 2 C -0.12 0.17 5.89 -104.54 -0.62 -0.44 16 3 C 0.16 -0.05 6.66 -39.02 -0.26 -0.31 16 4 O -0.49 0.30 11.84 -18.83 -0.22 0.07 16 5 C -0.15 0.01 5.27 -104.54 -0.55 -0.54 16 6 C -0.07 0.01 2.37 36.00 0.09 0.10 16 7 O -0.53 -0.18 12.88 -35.23 -0.45 -0.63 16 8 Si 0.68 -0.11 30.24 -169.99 -5.14 -5.25 16 9 C -0.05 -0.03 8.20 -39.22 -0.32 -0.35 16 10 C -0.14 0.03 5.87 -104.96 -0.62 -0.59 16 11 C 0.56 0.39 7.76 -12.44 -0.10 0.29 16 12 O -0.53 -2.44 16.34 5.29 0.09 -2.35 16 13 N -0.73 2.08 5.51 -61.33 -0.34 1.75 16 14 C 0.13 -0.44 5.50 -4.04 -0.02 -0.46 16 15 C -0.13 0.68 3.34 -89.81 -0.30 0.38 16 16 H 0.10 -0.55 7.05 -51.93 -0.37 -0.92 16 17 C -0.13 0.54 7.44 -25.92 -0.19 0.35 16 18 C 0.13 -0.42 5.21 -67.03 -0.35 -0.77 16 19 H 0.12 -0.38 8.14 -51.92 -0.42 -0.80 16 20 N -0.36 0.12 3.81 -55.23 -0.21 -0.10 16 21 C 0.25 -0.21 10.83 -90.65 -0.98 -1.19 16 22 N -0.54 -1.13 11.19 -15.83 -0.18 -1.31 16 23 C 0.20 0.33 13.03 -91.81 -1.20 -0.86 16 24 N -0.31 -0.78 12.70 29.29 0.37 -0.41 16 25 C -0.14 0.78 6.90 -25.83 -0.18 0.60 16 26 C -0.07 0.15 9.18 -39.22 -0.36 -0.21 16 27 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.08 -0.17 7.52 -51.93 -0.39 -0.56 16 29 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 30 H 0.40 -1.53 9.06 45.56 0.41 -1.12 16 31 H 0.12 -0.01 7.82 -51.93 -0.41 -0.42 16 32 H 0.37 -0.89 8.70 45.56 0.40 -0.50 16 33 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 34 H -0.25 -0.50 6.69 56.52 0.38 -0.12 16 35 H 0.15 0.15 4.43 -52.48 -0.23 -0.08 16 36 H 0.40 -2.22 6.49 -40.82 -0.27 -2.49 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.08 -0.22 7.87 -51.93 -0.41 -0.63 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.11 -0.56 8.10 -51.93 -0.42 -0.98 16 41 H 0.21 -1.09 6.76 -52.48 -0.35 -1.44 16 42 H 0.22 -0.32 8.06 -52.49 -0.42 -0.74 16 43 H 0.11 -0.72 7.92 -51.93 -0.41 -1.13 16 44 H 0.08 -0.53 7.02 -51.93 -0.36 -0.89 16 45 H 0.13 -0.69 6.39 -52.49 -0.34 -1.03 16 LS Contribution 375.41 15.07 5.66 5.66 Total: 0.00 -11.68 375.41 -10.93 -22.61 By element: Atomic # 1 Polarization: -11.82 SS G_CDS: -4.90 Total: -16.72 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -5.60 Total: -3.31 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.35 Total: -0.07 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.59 Total: -2.91 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.14 Total: -5.25 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -11.68 -10.93 -22.61 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.023 kcal (2) G-P(sol) polarization free energy of solvation -11.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.608 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds