Wall clock time and date at job start Sun Mar 7 2021 13:22:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.47232 * 2 1 4 4 C 1.50705 * 109.46380 * 240.00263 * 2 1 3 5 5 C 1.38709 * 120.02672 * 285.02049 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 C 1.53008 * 109.46802 * 179.97438 * 11 10 8 13 13 H 1.09001 * 112.85130 * 43.80375 * 12 11 10 14 14 C 1.53781 * 113.61052 * 174.99820 * 12 11 10 15 15 C 1.53776 * 87.07943 * 139.97897 * 14 12 11 16 16 H 1.09007 * 113.61587 * 219.92979 * 15 14 12 17 17 N 1.46509 * 113.61781 * 89.11464 * 15 14 12 18 18 C 1.34425 * 126.82189 * 274.71229 * 17 15 14 19 19 N 1.30831 * 108.07815 * 179.88939 * 18 17 15 20 20 C 1.33246 * 109.82479 * 0.38044 * 19 18 17 21 21 N 1.30705 * 108.94905 * 359.76232 * 20 19 18 22 22 C 1.53774 * 87.08251 * 334.56508 * 15 14 12 23 23 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 24 24 C 1.38126 * 119.94113 * 359.97438 * 23 5 4 25 25 C 1.38290 * 120.05768 * 359.97438 * 24 23 5 26 26 C 1.38164 * 120.02639 * 105.00360 * 4 2 1 27 27 H 0.96700 * 113.99711 * 59.98948 * 1 2 3 28 28 H 1.08998 * 109.47252 * 120.01022 * 2 1 3 29 29 H 1.48492 * 110.00029 * 60.00385 * 3 2 1 30 30 H 1.48505 * 109.99635 * 181.32058 * 3 2 1 31 31 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 32 32 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 33 33 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 34 34 H 1.09000 * 109.47300 * 299.99482 * 11 10 8 35 35 H 1.08994 * 109.47756 * 59.99856 * 11 10 8 36 36 H 1.08998 * 113.61450 * 254.52444 * 14 12 11 37 37 H 1.08996 * 113.61851 * 25.34887 * 14 12 11 38 38 H 1.08001 * 125.95914 * 0.03577 * 18 17 15 39 39 H 1.08001 * 125.52089 * 179.80082 * 20 19 18 40 40 H 1.09004 * 113.61583 * 270.88297 * 22 15 14 41 41 H 1.09009 * 113.61813 * 139.98203 * 22 15 14 42 42 H 1.07998 * 120.02758 * 179.97438 * 23 5 4 43 43 H 1.07995 * 119.97120 * 179.97438 * 24 23 5 44 44 H 1.07995 * 119.94278 * 180.27458 * 25 24 23 45 45 H 1.08005 * 119.97654 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2306 5 6 1.8691 -2.0940 -1.3073 6 8 1.3561 -2.8107 -0.2729 7 6 1.3240 -4.2316 -0.4210 8 6 0.7276 -4.8523 0.8161 9 8 0.3663 -4.1472 1.7343 10 7 0.5969 -6.1909 0.9023 11 6 0.0167 -6.7941 2.1047 12 6 -0.0176 -8.3156 1.9461 13 1 0.9049 -8.7185 1.5282 14 6 -0.4981 -9.0555 3.2057 15 6 -1.2734 -9.9920 2.2642 16 1 -2.2622 -10.2629 2.6347 17 7 -0.4960 -11.1510 1.8182 18 6 0.3505 -11.2002 0.7751 19 7 0.8461 -12.4093 0.7111 20 6 0.3356 -13.1592 1.6871 21 7 -0.4916 -12.4329 2.3919 22 6 -1.2884 -8.8341 1.2525 23 6 2.3318 -2.7451 -2.4419 24 6 2.8524 -2.0143 -3.4920 25 6 2.9123 -0.6349 -3.4135 26 6 2.4536 0.0159 -2.2834 27 1 -0.3933 0.4418 -0.7650 28 1 1.7924 -0.5140 0.8899 29 1 1.5617 2.4678 1.2085 30 1 3.5347 1.7701 -0.0322 31 1 0.7169 -4.4929 -1.2878 32 1 2.3382 -4.6053 -0.5618 33 1 0.8863 -6.7548 0.1680 34 1 0.6235 -6.5325 2.9715 35 1 -0.9977 -6.4209 2.2453 36 1 0.3033 -9.5520 3.7528 37 1 -1.1390 -8.4523 3.8487 38 1 0.5830 -10.3833 0.1080 39 1 0.5682 -14.1984 1.8670 40 1 -2.1466 -8.1707 1.3608 41 1 -1.1251 -9.1518 0.2226 42 1 2.2848 -3.8223 -2.5038 43 1 3.2130 -2.5206 -4.3752 44 1 3.3156 -0.0651 -4.2375 45 1 2.5016 1.0933 -2.2245 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946164_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:22:56 Heat of formation + Delta-G solvation = 58.086182 kcal Electronic energy + Delta-G solvation = -28950.384223 eV Core-core repulsion = 24745.534633 eV Total energy + Delta-G solvation = -4204.849590 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.28561 -41.65437 -40.94183 -40.10135 -38.48567 -37.38897 -35.88156 -33.43520 -32.76652 -32.17908 -31.45687 -30.32005 -28.33846 -27.30771 -26.63326 -25.24170 -23.57032 -23.13591 -22.63889 -22.52739 -21.77257 -20.81408 -19.50716 -18.60305 -18.09261 -17.93648 -17.59507 -17.29457 -16.96485 -16.81983 -16.54978 -16.35512 -16.17454 -15.80653 -15.66894 -15.47041 -15.30356 -15.01350 -14.89550 -14.68242 -14.20571 -14.09077 -13.88323 -13.78285 -13.60940 -13.30052 -13.07629 -13.05077 -12.47603 -12.41456 -12.24588 -12.01059 -11.98672 -11.93969 -11.69970 -11.03614 -10.96663 -10.83049 -10.67788 -10.31771 -10.26829 -10.03727 -9.25739 -4.98601 0.16773 0.35598 0.55693 1.11874 1.36311 1.37630 1.42946 1.70783 1.95720 2.06106 2.45132 2.63622 2.80537 2.95215 3.19953 3.24769 3.31192 3.43098 3.56536 3.71556 3.73327 3.74218 3.80986 3.83504 3.84809 3.94724 3.98318 4.08480 4.21241 4.25435 4.29504 4.30651 4.34898 4.46625 4.49322 4.58114 4.64472 4.64910 4.81849 4.92105 5.14615 5.20793 5.22512 5.27172 5.39832 5.43107 5.63490 5.73887 6.13858 6.30510 6.75061 7.01136 7.05096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.057 4.057 3 Si 0.682 3.318 4 C -0.149 4.149 5 C 0.150 3.850 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.515 3.485 9 O -0.506 6.506 10 N -0.729 5.729 11 C 0.133 3.867 12 C -0.130 4.130 13 H 0.101 0.899 14 C -0.133 4.133 15 C 0.128 3.872 16 H 0.118 0.882 17 N -0.363 5.363 18 C 0.251 3.749 19 N -0.544 5.544 20 C 0.199 3.801 21 N -0.315 5.315 22 C -0.137 4.137 23 C -0.212 4.212 24 C -0.073 4.073 25 C -0.151 4.151 26 C -0.075 4.075 27 H 0.373 0.627 28 H 0.113 0.887 29 H -0.254 1.254 30 H -0.257 1.257 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.402 0.598 34 H 0.075 0.925 35 H 0.077 0.923 36 H 0.082 0.918 37 H 0.111 0.889 38 H 0.215 0.785 39 H 0.219 0.781 40 H 0.115 0.885 41 H 0.083 0.917 42 H 0.129 0.871 43 H 0.129 0.871 44 H 0.130 0.870 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.025 0.305 -6.197 6.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.168 4.168 3 Si 0.584 3.416 4 C -0.150 4.150 5 C 0.105 3.895 6 O -0.190 6.190 7 C -0.040 4.040 8 C 0.299 3.701 9 O -0.380 6.380 10 N -0.384 5.384 11 C 0.010 3.990 12 C -0.149 4.149 13 H 0.119 0.881 14 C -0.172 4.172 15 C 0.025 3.975 16 H 0.136 0.864 17 N -0.154 5.154 18 C -0.045 4.045 19 N -0.271 5.271 20 C -0.103 4.103 21 N -0.141 5.141 22 C -0.176 4.176 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.169 4.169 26 C -0.092 4.092 27 H 0.219 0.781 28 H 0.131 0.869 29 H -0.179 1.179 30 H -0.182 1.182 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.236 0.764 34 H 0.093 0.907 35 H 0.095 0.905 36 H 0.101 0.899 37 H 0.129 0.871 38 H 0.231 0.769 39 H 0.236 0.764 40 H 0.133 0.867 41 H 0.102 0.898 42 H 0.147 0.853 43 H 0.147 0.853 44 H 0.148 0.852 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.041 0.860 -3.905 3.999 hybrid contribution 0.400 -1.076 -0.527 1.263 sum 0.440 -0.216 -4.432 4.459 Atomic orbital electron populations 1.86603 1.16942 1.81475 1.48595 1.24934 0.85371 1.09256 0.97210 0.95234 0.81051 0.77855 0.87494 1.19736 1.05628 0.91084 0.98569 1.18796 0.93182 0.90844 0.86724 1.86236 1.77450 1.16786 1.38534 1.22464 1.02473 0.81504 0.97540 1.20025 0.79302 0.82387 0.88369 1.90817 1.47089 1.61004 1.39042 1.45773 1.65355 1.06314 1.20928 1.21365 0.99669 0.90490 0.87511 1.22992 0.98794 0.94710 0.98359 0.88120 1.23363 1.00884 0.96701 0.96255 1.22184 0.95592 0.82072 0.97686 0.86435 1.50253 1.33476 1.08964 1.22670 1.25950 0.89970 0.97262 0.91354 1.70608 1.28769 1.02320 1.25353 1.26118 0.92907 1.01200 0.90108 1.78122 1.24131 0.89497 1.22378 1.23560 0.99430 0.95750 0.98817 1.21294 1.06483 1.00429 0.94877 1.21028 0.96274 0.94106 0.97689 1.21084 1.02669 0.94589 0.98577 1.20868 0.96692 0.99134 0.92531 0.78055 0.86914 1.17879 1.18186 0.88750 0.88912 0.76407 0.90673 0.90480 0.89883 0.87116 0.76918 0.76438 0.86684 0.89817 0.85289 0.85319 0.85157 0.84672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.48 12.88 -35.23 -0.45 -1.94 16 2 C -0.06 -0.12 2.38 36.01 0.09 -0.03 16 3 Si 0.68 0.09 29.92 -169.99 -5.09 -4.99 16 4 C -0.15 -0.21 5.27 -104.47 -0.55 -0.76 16 5 C 0.15 0.27 6.66 -39.21 -0.26 0.01 16 6 O -0.28 -0.84 9.00 -39.32 -0.35 -1.20 16 7 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 8 C 0.51 0.37 7.91 -10.99 -0.09 0.28 16 9 O -0.51 -3.13 16.50 -14.35 -0.24 -3.37 16 10 N -0.73 2.38 5.56 -60.29 -0.33 2.04 16 11 C 0.13 -0.42 5.51 -4.04 -0.02 -0.44 16 12 C -0.13 0.66 3.35 -89.80 -0.30 0.36 16 13 H 0.10 -0.55 7.05 -51.93 -0.37 -0.92 16 14 C -0.13 0.51 7.44 -25.92 -0.19 0.32 16 15 C 0.13 -0.40 5.21 -67.12 -0.35 -0.75 16 16 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 17 N -0.36 0.07 3.81 -55.32 -0.21 -0.14 16 18 C 0.25 -0.19 10.82 -90.66 -0.98 -1.17 16 19 N -0.54 -1.19 11.19 -15.83 -0.18 -1.36 16 20 C 0.20 0.36 13.03 -91.82 -1.20 -0.84 16 21 N -0.31 -0.83 12.70 29.29 0.37 -0.45 16 22 C -0.14 0.77 6.89 -25.92 -0.18 0.59 16 23 C -0.21 0.12 9.04 -39.43 -0.36 -0.24 16 24 C -0.07 0.09 10.04 -39.60 -0.40 -0.31 16 25 C -0.15 0.18 10.04 -39.56 -0.40 -0.22 16 26 C -0.07 0.05 8.66 -39.61 -0.34 -0.30 16 27 H 0.37 -0.66 8.70 45.56 0.40 -0.26 16 28 H 0.11 0.47 7.83 -51.93 -0.41 0.06 16 29 H -0.25 -0.90 7.11 56.52 0.40 -0.50 16 30 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 31 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 32 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 33 H 0.40 -2.65 8.47 -40.82 -0.35 -2.99 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.08 -0.19 7.84 -51.93 -0.41 -0.59 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.11 -0.53 8.10 -51.93 -0.42 -0.95 16 38 H 0.21 -1.08 6.76 -52.49 -0.35 -1.44 16 39 H 0.22 -0.30 8.06 -52.49 -0.42 -0.72 16 40 H 0.11 -0.70 7.90 -51.93 -0.41 -1.11 16 41 H 0.08 -0.53 7.02 -51.92 -0.36 -0.89 16 42 H 0.13 -0.41 6.30 -52.49 -0.33 -0.74 16 43 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 44 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 45 H 0.14 -0.41 5.13 -52.48 -0.27 -0.68 16 LS Contribution 378.25 15.07 5.70 5.70 Total: 0.00 -14.19 378.25 -11.93 -26.12 By element: Atomic # 1 Polarization: -11.24 SS G_CDS: -5.81 Total: -17.05 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -5.34 Total: -3.36 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.35 Total: 0.08 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -1.04 Total: -6.50 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: -5.09 Total: -4.99 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -14.19 -11.93 -26.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.208 kcal (2) G-P(sol) polarization free energy of solvation -14.191 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.122 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds