Wall clock time and date at job start Sun Mar 7 2021 13:24:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46906 * 110.99544 * 2 1 4 4 C 1.50691 * 109.47319 * 293.94980 * 3 2 1 5 5 O 1.21289 * 120.00145 * 0.02562 * 4 3 2 6 6 N 1.34780 * 120.00290 * 179.97438 * 4 3 2 7 7 C 1.46500 * 119.99961 * 179.97438 * 6 4 3 8 8 C 1.53004 * 109.46717 * 180.02562 * 7 6 4 9 9 H 1.08997 * 112.85231 * 316.19743 * 8 7 6 10 10 C 1.53776 * 113.69017 * 87.46976 * 8 7 6 11 11 C 1.53781 * 87.08215 * 139.98810 * 10 8 7 12 12 H 1.08994 * 113.69273 * 220.00476 * 11 10 8 13 13 N 1.46504 * 113.61113 * 89.11399 * 11 10 8 14 14 C 1.34423 * 126.82470 * 347.48660 * 13 11 10 15 15 N 1.30834 * 108.07591 * 180.02562 * 14 13 11 16 16 C 1.33241 * 109.83169 * 0.02562 * 15 14 13 17 17 N 1.30715 * 108.94302 * 359.97438 * 16 15 14 18 18 C 1.53780 * 87.08132 * 334.56690 * 11 10 8 19 19 C 1.39677 * 111.00069 * 123.94811 * 2 1 3 20 20 C 1.38888 * 120.07055 * 116.04931 * 19 2 1 21 21 C 1.50702 * 120.04110 * 0.02562 * 20 19 2 22 22 O 1.42900 * 109.46929 * 284.99922 * 21 20 19 23 23 Si 1.86298 * 109.47492 * 164.99963 * 21 20 19 24 24 C 1.38124 * 119.92553 * 179.97438 * 20 19 2 25 25 C 1.38271 * 120.07197 * 0.02562 * 24 20 19 26 26 C 1.50699 * 119.92307 * 179.97438 * 25 24 20 27 27 F 1.39908 * 109.47133 * 90.00123 * 26 25 24 28 28 F 1.39898 * 109.47211 * 210.00041 * 26 25 24 29 29 F 1.39907 * 109.47174 * 330.00324 * 26 25 24 30 30 C 1.38304 * 120.14869 * 359.97438 * 25 24 20 31 31 C 1.38080 * 120.07396 * 359.73863 * 30 25 24 32 32 H 1.09003 * 109.47367 * 60.00642 * 1 2 3 33 33 H 1.09000 * 109.47009 * 179.97438 * 1 2 3 34 34 H 1.08999 * 109.47842 * 300.00028 * 1 2 3 35 35 H 1.09005 * 109.47089 * 173.94833 * 3 2 1 36 36 H 1.09000 * 109.46903 * 53.95165 * 3 2 1 37 37 H 0.96999 * 119.99492 * 0.02562 * 6 4 3 38 38 H 1.09002 * 109.46794 * 60.00915 * 7 6 4 39 39 H 1.08995 * 109.47779 * 300.00824 * 7 6 4 40 40 H 1.08998 * 113.61881 * 25.44136 * 10 8 7 41 41 H 1.09003 * 113.61332 * 254.53770 * 10 8 7 42 42 H 1.07999 * 125.96399 * 0.07261 * 14 13 11 43 43 H 1.08002 * 125.52530 * 180.02562 * 16 15 14 44 44 H 1.09003 * 113.61281 * 139.97697 * 18 11 10 45 45 H 1.08998 * 113.61843 * 270.79999 * 18 11 10 46 46 H 1.08997 * 109.46907 * 44.99759 * 21 20 19 47 47 H 0.96703 * 113.99878 * 59.99977 * 22 21 20 48 48 H 1.48498 * 109.99884 * 300.00180 * 23 21 20 49 49 H 1.48502 * 110.00095 * 61.31685 * 23 21 20 50 50 H 1.08000 * 119.96446 * 180.02562 * 24 20 19 51 51 H 1.08006 * 119.95980 * 180.02562 * 30 25 24 52 52 H 1.08001 * 120.03466 * 180.27669 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6369 2.0472 -1.2984 5 8 1.0047 1.4456 -2.1408 6 7 2.0179 3.3203 -1.5233 7 6 1.6698 3.9769 -2.7858 8 6 2.2180 5.4054 -2.7857 9 1 2.0507 5.9228 -1.8411 10 6 3.6634 5.5125 -3.2993 11 6 3.2286 6.7995 -4.0201 12 1 3.6547 6.9083 -5.0174 13 7 3.3752 8.0073 -3.2039 14 6 3.6090 8.0625 -1.8814 15 7 3.6726 9.3219 -1.5326 16 6 3.4846 10.0966 -2.6001 17 7 3.2985 9.3375 -3.6479 18 6 1.8023 6.2247 -4.0189 19 6 1.9695 -0.7282 1.0817 20 6 2.7117 -1.8812 0.8607 21 6 2.9787 -2.3483 -0.5470 22 8 1.7920 -2.9320 -1.0883 23 14 4.3435 -3.6163 -0.5323 24 6 3.2057 -2.5987 1.9326 25 6 2.9617 -2.1705 3.2245 26 6 3.5018 -2.9563 4.3915 27 9 4.7753 -2.4817 4.7239 28 9 2.6475 -2.8074 5.4893 29 9 3.5841 -4.3092 4.0447 30 6 2.2230 -1.0229 3.4481 31 6 1.7312 -0.2977 2.3809 32 1 -0.3634 0.5137 -0.8901 33 1 -0.3633 -1.0277 -0.0005 34 1 -0.3635 0.5138 0.8899 35 1 3.0796 1.3446 0.1083 36 1 1.5609 1.9274 0.8309 37 1 2.5231 3.8015 -0.8494 38 1 0.5856 4.0034 -2.8947 39 1 2.1049 3.4212 -3.6164 40 1 3.9470 4.7072 -3.9769 41 1 4.3960 5.6804 -2.5098 42 1 3.7250 7.2151 -1.2219 43 1 3.4866 11.1767 -2.5999 44 1 1.0323 6.9675 -3.8103 45 1 1.5764 5.6152 -4.8939 46 1 3.2785 -1.4989 -1.1609 47 1 1.0383 -2.3273 -1.1264 48 1 5.5833 -3.0216 0.0285 49 1 3.9345 -4.7934 0.2754 50 1 3.7833 -3.4951 1.7615 51 1 2.0345 -0.6910 4.4584 52 1 1.1583 0.6009 2.5561 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946164_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:24:12 Heat of formation + Delta-G solvation = -38.646615 kcal Electronic energy + Delta-G solvation = -41310.733923 eV Core-core repulsion = 35479.971181 eV Total energy + Delta-G solvation = -5830.762742 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.167 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -51.37186 -48.89928 -48.83344 -43.21162 -41.83393 -40.79889 -39.95563 -37.75642 -37.57954 -35.65945 -33.31673 -33.09878 -32.26593 -32.12765 -30.27973 -28.30055 -27.63888 -26.98080 -26.92520 -25.38908 -24.74348 -23.47787 -23.05749 -22.37846 -22.11273 -21.49814 -20.54423 -19.72470 -19.67235 -19.56042 -18.48640 -18.17449 -17.98741 -17.78445 -17.13514 -16.96320 -16.71573 -16.65345 -16.29084 -16.15499 -15.83059 -15.82527 -15.75050 -15.60656 -15.50792 -15.30135 -15.23984 -15.04562 -14.99657 -14.99301 -14.93976 -14.76400 -14.46238 -14.18247 -13.97047 -13.88043 -13.66076 -13.47219 -13.33869 -13.28717 -13.02489 -12.94937 -12.77373 -12.59884 -12.29799 -12.09558 -11.71274 -11.60285 -11.43409 -11.06348 -11.04597 -10.87429 -10.85209 -10.56145 -10.35336 -10.18579 -10.04474 -9.67333 -4.88305 -0.47987 -0.11048 0.62354 1.29327 1.31949 1.43313 1.57201 1.66284 1.89110 1.93394 1.95396 2.07381 2.48848 2.68747 2.78492 3.12937 3.18815 3.30664 3.41900 3.44060 3.47373 3.53920 3.67703 3.74496 3.82375 3.89769 3.97083 3.98655 4.06171 4.12901 4.15775 4.21741 4.28312 4.36149 4.40781 4.43482 4.47979 4.55848 4.57560 4.70355 4.70885 4.79364 4.82077 4.86346 4.93509 4.95190 4.98422 5.07526 5.17843 5.27978 5.32193 5.41652 5.50511 5.56692 5.91632 6.03064 6.59010 6.61987 7.07776 7.31190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.502 5.502 3 C 0.036 3.964 4 C 0.514 3.486 5 O -0.560 6.560 6 N -0.717 5.717 7 C 0.137 3.863 8 C -0.113 4.113 9 H 0.109 0.891 10 C -0.121 4.121 11 C 0.114 3.886 12 H 0.112 0.888 13 N -0.363 5.363 14 C 0.258 3.742 15 N -0.579 5.579 16 C 0.189 3.811 17 N -0.353 5.353 18 C -0.133 4.133 19 C 0.137 3.863 20 C -0.098 4.098 21 C -0.069 4.069 22 O -0.545 6.545 23 Si 0.786 3.214 24 C -0.084 4.084 25 C -0.187 4.187 26 C 0.506 3.494 27 F -0.179 7.179 28 F -0.174 7.174 29 F -0.186 7.186 30 C -0.053 4.053 31 C -0.134 4.134 32 H 0.086 0.914 33 H 0.070 0.930 34 H 0.047 0.953 35 H 0.123 0.877 36 H 0.100 0.900 37 H 0.417 0.583 38 H 0.057 0.943 39 H 0.070 0.930 40 H 0.125 0.875 41 H 0.098 0.902 42 H 0.255 0.745 43 H 0.235 0.765 44 H 0.062 0.938 45 H 0.119 0.881 46 H 0.093 0.907 47 H 0.373 0.627 48 H -0.261 1.261 49 H -0.290 1.290 50 H 0.125 0.875 51 H 0.160 0.840 52 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.555 3.481 -0.659 3.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.223 5.223 3 C -0.093 4.093 4 C 0.300 3.700 5 O -0.438 6.438 6 N -0.371 5.371 7 C 0.013 3.987 8 C -0.132 4.132 9 H 0.127 0.873 10 C -0.159 4.159 11 C 0.011 3.989 12 H 0.130 0.870 13 N -0.153 5.153 14 C -0.038 4.038 15 N -0.307 5.307 16 C -0.113 4.113 17 N -0.181 5.181 18 C -0.172 4.172 19 C 0.043 3.957 20 C -0.100 4.100 21 C -0.178 4.178 22 O -0.352 6.352 23 Si 0.689 3.311 24 C -0.102 4.102 25 C -0.189 4.189 26 C 0.452 3.548 27 F -0.160 7.160 28 F -0.155 7.155 29 F -0.167 7.167 30 C -0.071 4.071 31 C -0.154 4.154 32 H 0.104 0.896 33 H 0.089 0.911 34 H 0.066 0.934 35 H 0.141 0.859 36 H 0.118 0.882 37 H 0.253 0.747 38 H 0.076 0.924 39 H 0.088 0.912 40 H 0.143 0.857 41 H 0.116 0.884 42 H 0.270 0.730 43 H 0.251 0.749 44 H 0.081 0.919 45 H 0.137 0.863 46 H 0.111 0.889 47 H 0.222 0.778 48 H -0.186 1.186 49 H -0.218 1.218 50 H 0.142 0.858 51 H 0.177 0.823 52 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.118 2.206 -1.722 3.013 hybrid contribution -0.976 1.319 2.037 2.616 sum 0.142 3.525 0.316 3.542 Atomic orbital electron populations 1.22655 0.83818 1.03254 1.02667 1.59174 1.09934 1.13514 1.39711 1.22189 1.03562 0.87801 0.95704 1.20617 0.78823 0.81775 0.88739 1.90726 1.40551 1.64913 1.47571 1.45812 1.57815 1.13116 1.20341 1.21231 0.99886 0.91310 0.86232 1.22854 0.96188 0.94631 0.99523 0.87332 1.23535 0.96826 0.94331 1.01194 1.22475 0.99879 0.80686 0.95830 0.86970 1.50393 1.51966 1.05198 1.07738 1.26686 0.94743 0.97478 0.84919 1.70594 1.26234 1.01943 1.31923 1.26524 0.97225 1.02445 0.85134 1.78036 1.27003 0.88313 1.24762 1.23370 0.94911 0.98924 0.99977 1.18811 0.94606 0.92756 0.89556 1.20325 0.98415 0.95194 0.96035 1.25176 0.95871 1.07056 0.89723 1.86680 1.21661 1.42108 1.84708 0.92411 0.74152 0.76296 0.88281 1.20793 0.98751 0.99059 0.91630 1.19975 1.06810 1.00179 0.91924 1.18422 0.75783 0.77546 0.83021 1.93235 1.41283 1.88089 1.93391 1.93204 1.70297 1.95403 1.56598 1.93197 1.96171 1.35302 1.92054 1.21130 0.92915 0.91306 1.01760 1.21962 1.00469 1.01576 0.91357 0.89577 0.91136 0.93436 0.85887 0.88239 0.74654 0.92446 0.91178 0.85668 0.88362 0.72954 0.74916 0.91938 0.86292 0.88932 0.77824 1.18596 1.21780 0.85757 0.82287 0.81591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 8.63 127.69 1.10 1.00 16 2 N -0.50 2.42 3.22 -724.44 -2.33 0.09 16 3 C 0.04 -0.36 5.03 85.55 0.43 0.07 16 4 C 0.51 -2.97 7.55 87.65 0.66 -2.31 16 5 O -0.56 -1.94 14.31 -3.06 -0.04 -1.99 16 6 N -0.72 8.46 5.56 -463.06 -2.57 5.88 16 7 C 0.14 -1.41 5.52 86.38 0.48 -0.93 16 8 C -0.11 1.54 3.34 -10.27 -0.03 1.50 16 9 H 0.11 -1.62 7.02 -2.39 -0.02 -1.64 16 10 C -0.12 1.75 6.89 31.12 0.21 1.97 16 11 C 0.11 -0.89 5.21 45.52 0.24 -0.66 16 12 H 0.11 -0.77 8.14 -2.39 -0.02 -0.79 16 13 N -0.36 0.56 3.81 -328.94 -1.25 -0.70 16 14 C 0.26 -0.88 10.82 180.36 1.95 1.08 16 15 N -0.58 -2.08 11.19 -204.00 -2.28 -4.36 16 16 C 0.19 0.70 13.03 180.76 2.36 3.06 16 17 N -0.35 -1.89 12.70 -61.24 -0.78 -2.66 16 18 C -0.13 1.25 7.44 31.12 0.23 1.48 16 19 C 0.14 -0.45 4.61 38.21 0.18 -0.28 16 20 C -0.10 -0.11 5.28 -19.74 -0.10 -0.22 16 21 C -0.07 -0.08 2.30 71.24 0.16 0.08 16 22 O -0.54 -2.16 12.65 -148.98 -1.89 -4.05 16 23 Si 0.79 0.82 30.40 68.60 2.09 2.91 16 24 C -0.08 -0.31 8.01 22.25 0.18 -0.13 16 25 C -0.19 -0.37 5.46 -19.84 -0.11 -0.48 16 26 C 0.51 2.25 3.36 71.24 0.24 2.49 16 27 F -0.18 -0.97 17.30 44.97 0.78 -0.19 16 28 F -0.17 -0.69 16.46 44.97 0.74 0.05 16 29 F -0.19 -1.42 16.46 44.97 0.74 -0.68 16 30 C -0.05 0.18 9.39 22.25 0.21 0.39 16 31 C -0.13 0.85 8.70 22.40 0.19 1.04 16 32 H 0.09 -0.07 5.88 -2.39 -0.01 -0.08 16 33 H 0.07 -0.25 7.53 -2.39 -0.02 -0.27 16 34 H 0.05 -0.36 7.49 -2.39 -0.02 -0.38 16 35 H 0.12 -1.53 8.06 -2.38 -0.02 -1.55 16 36 H 0.10 -1.48 7.46 -2.39 -0.02 -1.49 16 37 H 0.42 -7.54 8.47 -92.71 -0.79 -8.33 16 38 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 39 H 0.07 -0.59 7.85 -2.39 -0.02 -0.61 16 40 H 0.13 -1.99 7.90 -2.39 -0.02 -2.01 16 41 H 0.10 -1.65 7.03 -2.39 -0.02 -1.67 16 42 H 0.25 -3.50 6.75 -2.91 -0.02 -3.52 16 43 H 0.23 -0.52 8.06 -2.91 -0.02 -0.54 16 44 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 45 H 0.12 -1.33 8.10 -2.39 -0.02 -1.35 16 46 H 0.09 -0.07 7.78 -2.39 -0.02 -0.09 16 47 H 0.37 0.49 7.59 -74.06 -0.56 -0.07 16 48 H -0.26 -0.79 7.11 99.48 0.71 -0.08 16 49 H -0.29 -2.24 6.81 99.48 0.68 -1.56 16 50 H 0.13 0.71 4.48 -2.91 -0.01 0.70 16 51 H 0.16 -1.13 7.60 -2.91 -0.02 -1.16 16 52 H 0.17 -2.03 7.17 -2.91 -0.02 -2.05 16 Total: 0.00 -27.23 435.18 1.45 -25.78 By element: Atomic # 1 Polarization: -28.91 SS G_CDS: -0.32 Total: -29.23 kcal Atomic # 6 Polarization: 0.58 SS G_CDS: 8.57 Total: 9.16 kcal Atomic # 7 Polarization: 7.47 SS G_CDS: -9.22 Total: -1.75 kcal Atomic # 8 Polarization: -4.11 SS G_CDS: -1.93 Total: -6.04 kcal Atomic # 9 Polarization: -3.08 SS G_CDS: 2.26 Total: -0.82 kcal Atomic # 14 Polarization: 0.82 SS G_CDS: 2.09 Total: 2.91 kcal Total: -27.23 1.45 -25.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.869 kcal (2) G-P(sol) polarization free energy of solvation -27.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds