Wall clock time and date at job start Sun Mar 7 2021 13:24:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.47031 * 2 1 4 4 C 1.50693 * 109.47394 * 240.00166 * 2 1 3 5 5 C 1.34236 * 126.50378 * 104.97331 * 4 2 1 6 6 N 1.36834 * 109.94223 * 180.02562 * 5 4 2 7 7 C 1.46499 * 125.06666 * 179.97438 * 6 5 4 8 8 C 1.50701 * 109.46992 * 265.02269 * 7 6 5 9 9 O 1.21280 * 119.99781 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99795 * 179.97438 * 8 7 6 11 11 C 1.46497 * 119.99566 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.46983 * 180.02562 * 11 10 8 13 13 H 1.09006 * 112.85174 * 45.33110 * 12 11 10 14 14 C 1.53783 * 113.61575 * 176.53209 * 12 11 10 15 15 C 1.53779 * 87.08157 * 139.98132 * 14 12 11 16 16 H 1.09003 * 113.61501 * 219.93573 * 15 14 12 17 17 N 1.46503 * 113.61727 * 89.11321 * 15 14 12 18 18 C 1.34427 * 126.82622 * 274.71185 * 17 15 14 19 19 N 1.30835 * 108.07843 * 179.89041 * 18 17 15 20 20 C 1.33241 * 109.82492 * 0.38192 * 19 18 17 21 21 N 1.30710 * 108.95082 * 359.76041 * 20 19 18 22 22 C 1.53780 * 113.61687 * 274.13701 * 12 11 10 23 23 C 1.37693 * 109.87059 * 0.22580 * 6 5 4 24 24 C 1.39090 * 133.50746 * 180.39482 * 23 6 5 25 25 C 1.37784 * 119.77782 * 179.65306 * 24 23 6 26 26 C 1.38795 * 120.66510 * 359.75532 * 25 24 23 27 27 C 1.36658 * 120.52877 * 0.02562 * 26 25 24 28 28 C 1.39587 * 119.76584 * 359.97438 * 27 26 25 29 29 H 0.96693 * 113.99669 * 60.00549 * 1 2 3 30 30 H 1.08997 * 109.46852 * 119.99582 * 2 1 3 31 31 H 1.48500 * 109.99723 * 298.68177 * 3 2 1 32 32 H 1.48504 * 109.99831 * 59.99594 * 3 2 1 33 33 H 1.08001 * 125.03056 * 0.02562 * 5 4 2 34 34 H 1.09002 * 109.47391 * 145.02259 * 7 6 5 35 35 H 1.09001 * 109.46813 * 25.02316 * 7 6 5 36 36 H 0.96995 * 120.00011 * 0.02562 * 10 8 7 37 37 H 1.09001 * 109.47487 * 300.00114 * 11 10 8 38 38 H 1.09002 * 109.47182 * 60.00342 * 11 10 8 39 39 H 1.09002 * 113.61077 * 254.52509 * 14 12 11 40 40 H 1.08997 * 113.61453 * 25.34778 * 14 12 11 41 41 H 1.08002 * 125.95543 * 0.03833 * 18 17 15 42 42 H 1.08008 * 125.52075 * 179.79844 * 20 19 18 43 43 H 1.09005 * 113.61289 * 334.57270 * 22 12 11 44 44 H 1.09001 * 113.61411 * 105.46640 * 22 12 11 45 45 H 1.07998 * 120.11132 * 359.40870 * 24 23 6 46 46 H 1.08002 * 119.67091 * 179.78095 * 25 24 23 47 47 H 1.08001 * 119.73328 * 179.97438 * 26 25 24 48 48 H 1.08000 * 120.11850 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.4605 -0.1375 -2.3231 6 7 2.8022 -1.0988 -3.2349 7 6 3.4060 -0.8402 -4.5444 8 6 2.3254 -0.7837 -5.5934 9 8 1.1653 -0.9432 -5.2781 10 7 2.6484 -0.5548 -6.8818 11 6 1.5979 -0.4993 -7.9014 12 6 2.2284 -0.2293 -9.2690 13 1 3.1103 -0.8419 -9.4569 14 6 1.2158 -0.2357 -10.4263 15 6 1.9878 0.9621 -11.0044 16 1 1.3444 1.7308 -11.4324 17 7 3.0855 0.5780 -11.8955 18 6 4.3395 0.2538 -11.5357 19 7 5.0130 -0.0291 -12.6212 20 6 4.2285 0.1107 -13.6890 21 7 3.0383 0.4812 -13.2958 22 6 2.4418 1.2646 -9.5649 23 6 2.4888 -2.3452 -2.7407 24 6 2.6281 -3.6360 -3.2397 25 6 2.2143 -4.7106 -2.4831 26 6 1.6634 -4.5192 -1.2236 27 6 1.5215 -3.2600 -0.7120 28 6 1.9340 -2.1570 -1.4614 29 1 -0.3932 0.4416 -0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4585 -1.2242 32 1 1.5614 2.4679 1.2085 33 1 2.5963 0.9249 -2.4620 34 1 4.1057 -1.6402 -4.7863 35 1 3.9370 0.1114 -4.5180 36 1 3.5762 -0.4268 -7.1338 37 1 1.0667 -1.4507 -7.9280 38 1 0.8983 0.3007 -7.6591 39 1 1.2683 -1.1299 -11.0474 40 1 0.1988 0.0064 -10.1179 41 1 4.7233 0.2287 -10.5265 42 1 4.5275 -0.0558 -14.7135 43 1 1.7609 1.9191 -9.0207 44 1 3.4826 1.5800 -9.4914 45 1 3.0555 -3.7952 -4.2187 46 1 2.3199 -5.7119 -2.8738 47 1 1.3437 -5.3723 -0.6435 48 1 1.0916 -3.1187 0.2687 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946164_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:24:39 Heat of formation + Delta-G solvation = 131.561267 kcal Electronic energy + Delta-G solvation = -32094.213260 eV Core-core repulsion = 27733.816170 eV Total energy + Delta-G solvation = -4360.397090 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -43.22136 -42.51605 -40.88571 -39.94533 -38.14912 -37.70983 -35.81073 -34.11414 -33.29958 -32.17015 -31.51955 -30.23867 -29.78231 -28.21687 -26.96807 -25.86137 -24.89363 -23.71488 -23.09179 -22.70444 -22.37281 -21.71143 -20.74354 -20.55608 -18.75016 -18.41062 -17.89211 -17.79493 -17.43005 -16.94685 -16.75219 -16.48056 -16.36249 -16.22426 -16.06618 -15.79502 -15.57391 -15.31776 -15.14241 -14.91454 -14.74891 -14.65347 -14.36647 -14.08176 -14.00444 -13.61935 -13.51120 -13.34071 -13.05242 -12.98416 -12.72529 -12.56043 -12.37432 -12.15609 -11.99820 -11.76162 -11.72872 -11.66620 -11.12875 -11.05286 -10.86988 -10.60078 -10.52855 -10.44383 -10.17755 -9.14860 -8.62042 -4.87800 0.15151 0.61679 0.64804 1.27781 1.36205 1.44099 1.48740 1.62579 1.72419 1.94886 2.01650 2.22115 2.95452 3.08895 3.26299 3.43760 3.49055 3.52154 3.62751 3.67268 3.70814 3.79635 3.87329 3.88288 4.06272 4.11061 4.14637 4.19968 4.23157 4.31426 4.37378 4.50110 4.51571 4.59719 4.66075 4.67331 4.72890 4.73313 4.80208 4.88096 4.89936 4.91069 5.12582 5.14805 5.30204 5.35956 5.41260 5.51611 5.67307 5.74432 5.76330 5.90705 6.20665 6.24667 6.49519 6.55748 7.07122 7.16471 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.058 4.058 3 Si 0.788 3.212 4 C -0.217 4.217 5 C 0.077 3.923 6 N -0.465 5.465 7 C 0.086 3.914 8 C 0.489 3.511 9 O -0.577 6.577 10 N -0.708 5.708 11 C 0.135 3.865 12 C -0.112 4.112 13 H 0.112 0.888 14 C -0.135 4.135 15 C 0.116 3.884 16 H 0.112 0.888 17 N -0.364 5.364 18 C 0.258 3.742 19 N -0.578 5.578 20 C 0.190 3.810 21 N -0.355 5.355 22 C -0.119 4.119 23 C 0.092 3.908 24 C -0.133 4.133 25 C -0.109 4.109 26 C -0.155 4.155 27 C -0.089 4.089 28 C -0.116 4.116 29 H 0.381 0.619 30 H 0.108 0.892 31 H -0.270 1.270 32 H -0.306 1.306 33 H 0.199 0.801 34 H 0.145 0.855 35 H 0.168 0.832 36 H 0.422 0.578 37 H 0.051 0.949 38 H 0.068 0.932 39 H 0.062 0.938 40 H 0.116 0.884 41 H 0.257 0.743 42 H 0.235 0.765 43 H 0.124 0.876 44 H 0.104 0.896 45 H 0.133 0.867 46 H 0.144 0.856 47 H 0.135 0.865 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.249 3.345 -1.563 8.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.165 4.165 3 Si 0.691 3.309 4 C -0.225 4.225 5 C -0.049 4.049 6 N -0.148 5.148 7 C -0.038 4.038 8 C 0.274 3.726 9 O -0.455 6.455 10 N -0.362 5.362 11 C 0.011 3.989 12 C -0.131 4.131 13 H 0.130 0.870 14 C -0.174 4.174 15 C 0.013 3.987 16 H 0.130 0.870 17 N -0.154 5.154 18 C -0.037 4.037 19 N -0.306 5.306 20 C -0.113 4.113 21 N -0.183 5.183 22 C -0.157 4.157 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.128 4.128 26 C -0.174 4.174 27 C -0.107 4.107 28 C -0.120 4.120 29 H 0.230 0.770 30 H 0.126 0.874 31 H -0.196 1.196 32 H -0.234 1.234 33 H 0.216 0.784 34 H 0.162 0.838 35 H 0.185 0.815 36 H 0.260 0.740 37 H 0.070 0.930 38 H 0.086 0.914 39 H 0.081 0.919 40 H 0.134 0.866 41 H 0.273 0.727 42 H 0.251 0.749 43 H 0.142 0.858 44 H 0.122 0.878 45 H 0.151 0.849 46 H 0.162 0.838 47 H 0.153 0.847 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 6.121 3.878 -1.577 7.416 hybrid contribution -1.358 -0.517 -0.632 1.585 sum 4.763 3.361 -2.209 6.234 Atomic orbital electron populations 1.86556 1.19602 1.80607 1.49662 1.24738 0.82498 1.12193 0.97121 0.94179 0.89540 0.70322 0.76809 1.20704 1.11083 0.91834 0.98837 1.22024 0.99348 0.95125 0.88392 1.43442 1.53165 1.03705 1.14462 1.22037 0.93781 1.09401 0.78586 1.21483 0.90405 0.76069 0.84598 1.90816 1.22605 1.50270 1.81823 1.45752 1.12073 1.72426 1.05953 1.21237 0.90202 1.01552 0.85864 1.22858 0.99841 0.97785 0.92614 0.86990 1.23370 1.00105 0.97586 0.96388 1.22478 0.87422 0.99091 0.89720 0.87018 1.50383 1.10804 1.49997 1.04230 1.26735 0.81832 0.93698 1.01466 1.70600 1.35076 1.26541 0.98400 1.26526 0.86769 0.96925 1.01057 1.78039 1.23651 1.26347 0.90223 1.23555 1.05232 0.96450 0.90443 1.18386 1.01705 0.87061 0.94210 1.20241 1.04991 0.89115 1.01035 1.21127 0.98272 0.99061 0.94320 1.20910 1.02385 0.97041 0.97024 1.20446 0.98976 0.91745 0.99563 1.19350 1.03863 0.93842 0.94979 0.77029 0.87406 1.19650 1.23435 0.78431 0.83762 0.81459 0.73960 0.93042 0.91384 0.91944 0.86617 0.72708 0.74926 0.85800 0.87802 0.84868 0.83818 0.84740 0.86442 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.36 12.88 -148.98 -1.92 -6.28 16 2 C -0.06 -0.19 3.06 71.23 0.22 0.03 16 3 Si 0.79 -1.75 30.82 68.60 2.11 0.36 16 4 C -0.22 -0.98 5.57 -18.63 -0.10 -1.09 16 5 C 0.08 -0.04 9.89 83.00 0.82 0.79 16 6 N -0.47 0.15 2.27 -519.98 -1.18 -1.03 16 7 C 0.09 -0.87 6.48 85.63 0.56 -0.32 16 8 C 0.49 -2.10 7.90 87.66 0.69 -1.40 16 9 O -0.58 -4.90 16.42 -3.03 -0.05 -4.95 16 10 N -0.71 8.33 5.56 -463.06 -2.57 5.76 16 11 C 0.14 -1.23 5.50 86.38 0.47 -0.76 16 12 C -0.11 1.50 3.34 -10.27 -0.03 1.47 16 13 H 0.11 -1.69 7.05 -2.38 -0.02 -1.71 16 14 C -0.14 1.18 7.44 31.12 0.23 1.41 16 15 C 0.12 -0.91 5.22 45.57 0.24 -0.67 16 16 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 17 N -0.36 0.63 3.81 -328.65 -1.25 -0.63 16 18 C 0.26 -1.02 10.82 180.36 1.95 0.94 16 19 N -0.58 -1.86 11.19 -203.99 -2.28 -4.15 16 20 C 0.19 0.68 13.03 180.77 2.36 3.03 16 21 N -0.36 -1.89 12.70 -61.24 -0.78 -2.67 16 22 C -0.12 1.78 6.90 31.18 0.22 2.00 16 23 C 0.09 0.54 6.80 39.03 0.27 0.81 16 24 C -0.13 -0.56 10.00 22.37 0.22 -0.33 16 25 C -0.11 -0.47 10.01 22.30 0.22 -0.25 16 26 C -0.15 -0.96 9.97 22.03 0.22 -0.74 16 27 C -0.09 -0.80 10.05 22.23 0.22 -0.58 16 28 C -0.12 -1.03 6.35 -20.20 -0.13 -1.16 16 29 H 0.38 1.03 8.70 -74.06 -0.64 0.38 16 30 H 0.11 0.34 7.96 -2.39 -0.02 0.32 16 31 H -0.27 0.19 7.00 99.48 0.70 0.89 16 32 H -0.31 -1.84 7.11 99.48 0.71 -1.13 16 33 H 0.20 -1.50 6.27 -2.91 -0.02 -1.52 16 34 H 0.14 -2.17 8.14 -2.39 -0.02 -2.19 16 35 H 0.17 -3.17 8.12 -2.39 -0.02 -3.19 16 36 H 0.42 -8.35 8.47 -92.71 -0.79 -9.13 16 37 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.07 -0.48 7.88 -2.39 -0.02 -0.50 16 39 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 40 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 41 H 0.26 -3.80 6.75 -2.91 -0.02 -3.81 16 42 H 0.23 -0.54 8.06 -2.91 -0.02 -0.56 16 43 H 0.12 -2.01 7.92 -2.38 -0.02 -2.02 16 44 H 0.10 -1.89 7.01 -2.39 -0.02 -1.90 16 45 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 46 H 0.14 -0.09 8.06 -2.91 -0.02 -0.12 16 47 H 0.13 0.32 8.06 -2.91 -0.02 0.29 16 48 H 0.12 0.96 8.06 -2.91 -0.02 0.94 16 Total: 0.00 -38.27 405.17 0.33 -37.94 By element: Atomic # 1 Polarization: -27.13 SS G_CDS: -0.39 Total: -27.52 kcal Atomic # 6 Polarization: -5.47 SS G_CDS: 8.64 Total: 3.17 kcal Atomic # 7 Polarization: 5.35 SS G_CDS: -8.07 Total: -2.72 kcal Atomic # 8 Polarization: -9.27 SS G_CDS: -1.97 Total: -11.23 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: 2.11 Total: 0.36 kcal Total: -38.27 0.33 -37.94 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.500 kcal (2) G-P(sol) polarization free energy of solvation -38.271 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.939 kcal (6) G-S(sol) free energy of system = (1) + (5) 131.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds