Wall clock time and date at job start Sun Mar 7 2021 13:25:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86308 * 109.46937 * 2 1 4 4 C 1.50698 * 109.47285 * 120.00259 * 2 1 3 5 5 C 1.37813 * 119.94377 * 14.97812 * 4 2 1 6 6 C 1.39664 * 119.88355 * 180.02562 * 5 4 2 7 7 C 1.47725 * 120.12185 * 180.02562 * 6 5 4 8 8 O 1.21567 * 119.99724 * 359.97438 * 7 6 5 9 9 N 1.34771 * 120.00094 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99904 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47071 * 179.97438 * 10 9 7 12 12 H 1.08995 * 112.84689 * 45.33431 * 11 10 9 13 13 C 1.53780 * 113.61283 * 176.52797 * 11 10 9 14 14 C 1.53785 * 87.08023 * 139.98372 * 13 11 10 15 15 H 1.08999 * 113.61422 * 219.94099 * 14 13 11 16 16 N 1.46494 * 113.61284 * 89.11710 * 14 13 11 17 17 C 1.35312 * 125.86777 * 274.70869 * 16 14 13 18 18 C 1.35346 * 106.17760 * 179.90513 * 17 16 14 19 19 N 1.33775 * 106.49698 * 0.36077 * 18 17 16 20 20 N 1.28641 * 108.88395 * 359.76936 * 19 18 17 21 21 C 1.53781 * 113.61264 * 274.13672 * 11 10 9 22 22 C 1.39634 * 119.76307 * 359.97438 * 6 5 4 23 23 C 1.37861 * 119.87613 * 0.03072 * 22 6 5 24 24 C 1.38628 * 120.11975 * 359.96969 * 23 22 6 25 25 F 1.35100 * 119.87710 * 180.27862 * 24 23 22 26 26 H 0.96700 * 114.00667 * 59.99669 * 1 2 3 27 27 H 1.09003 * 109.47099 * 240.00066 * 2 1 3 28 28 H 1.48493 * 109.99819 * 60.00293 * 3 2 1 29 29 H 1.48500 * 109.99798 * 181.32156 * 3 2 1 30 30 H 1.08000 * 120.05620 * 0.02562 * 5 4 2 31 31 H 0.97003 * 120.00544 * 359.97438 * 9 7 6 32 32 H 1.08996 * 109.47235 * 299.99442 * 10 9 7 33 33 H 1.09006 * 109.47046 * 59.99766 * 10 9 7 34 34 H 1.08997 * 113.61547 * 254.53253 * 13 11 10 35 35 H 1.09000 * 113.61304 * 25.43593 * 13 11 10 36 36 H 1.08001 * 126.91325 * 0.02562 * 17 16 14 37 37 H 1.07998 * 126.75596 * 180.12649 * 18 17 16 38 38 H 1.08995 * 113.61443 * 334.56820 * 21 11 10 39 39 H 1.08997 * 113.61487 * 105.47428 * 21 11 10 40 40 H 1.08003 * 120.06129 * 179.97438 * 22 6 5 41 41 H 1.08000 * 119.93433 * 179.97438 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0730 -1.4943 1.9707 6 6 1.5398 -2.1517 3.1111 7 6 0.6245 -2.9938 3.9083 8 8 -0.5375 -3.1150 3.5723 9 7 1.0774 -3.6267 5.0086 10 6 0.1695 -4.4613 5.7994 11 6 0.9294 -5.0601 6.9847 12 1 1.5535 -4.3298 7.4999 13 6 0.0431 -5.8887 7.9296 14 6 1.2130 -6.8820 8.0284 15 1 0.9004 -7.9262 8.0279 16 7 2.1572 -6.5712 9.1044 17 6 3.2010 -5.7143 9.0204 18 6 3.7996 -5.7289 10.2342 19 7 3.1067 -6.5888 10.9891 20 7 2.1400 -7.0709 10.2906 21 6 1.6630 -6.3691 6.6482 22 6 2.8751 -2.0112 3.4945 23 6 3.7251 -1.2245 2.7468 24 6 3.2565 -0.5742 1.6157 25 9 4.0951 0.1910 0.8833 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5345 1.7704 -0.0322 30 1 0.0413 -1.6000 1.6696 31 1 2.0045 -3.5296 5.2770 32 1 -0.6563 -3.8523 6.1672 33 1 -0.2215 -5.2650 5.1755 34 1 -0.1829 -5.3853 8.8696 35 1 -0.8419 -6.3030 7.4466 36 1 3.4959 -5.1338 8.1587 37 1 4.6682 -5.1611 10.5333 38 1 1.2217 -6.9150 5.8144 39 1 2.7428 -6.2531 6.5554 40 1 3.2411 -2.5171 4.3758 41 1 4.7580 -1.1148 3.0427 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:25:58 Heat of formation + Delta-G solvation = 59.688256 kcal Electronic energy + Delta-G solvation = -27482.404357 eV Core-core repulsion = 23282.390073 eV Total energy + Delta-G solvation = -4200.014284 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.56804 -44.31913 -41.51364 -40.43708 -39.52530 -37.67560 -36.00351 -34.01791 -33.00097 -32.13320 -31.99328 -29.32605 -27.07680 -26.98476 -25.70603 -24.35891 -23.57825 -23.29458 -22.58680 -21.57116 -20.72285 -19.30114 -18.95296 -18.46002 -18.04385 -17.71969 -17.40316 -17.24736 -16.81694 -16.55130 -16.23276 -16.15529 -15.84654 -15.58038 -15.45532 -15.19053 -14.96573 -14.86774 -14.72993 -14.32088 -13.90751 -13.76601 -13.59306 -13.36096 -13.16325 -12.81456 -12.73737 -12.26945 -12.17762 -11.99017 -11.76493 -11.75240 -11.70716 -11.21608 -10.96860 -10.93491 -10.36467 -10.32943 -10.07358 -9.70983 -4.98151 -0.61241 -0.04593 0.62613 1.20695 1.37660 1.55746 1.59949 1.62367 1.92855 1.96012 2.51257 2.83537 3.01560 3.05613 3.21484 3.38393 3.44215 3.56617 3.61551 3.68486 3.72055 3.95454 4.08301 4.12037 4.14592 4.27300 4.30558 4.31531 4.41481 4.50760 4.60450 4.65575 4.71293 4.73324 4.77550 4.80788 4.86384 4.94430 4.97972 5.01379 5.13008 5.25459 5.30719 5.51723 5.71541 6.38453 6.80006 7.06247 7.50936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.077 4.077 3 Si 0.764 3.236 4 C -0.136 4.136 5 C -0.027 4.027 6 C -0.153 4.153 7 C 0.559 3.441 8 O -0.577 6.577 9 N -0.705 5.705 10 C 0.131 3.869 11 C -0.116 4.116 12 H 0.114 0.886 13 C -0.129 4.129 14 C 0.096 3.904 15 H 0.127 0.873 16 N -0.268 5.268 17 C -0.033 4.033 18 C -0.068 4.068 19 N -0.319 5.319 20 N -0.131 5.131 21 C -0.119 4.119 22 C -0.044 4.044 23 C -0.146 4.146 24 C 0.088 3.912 25 F -0.126 7.126 26 H 0.408 0.592 27 H 0.102 0.898 28 H -0.314 1.314 29 H -0.258 1.258 30 H 0.136 0.864 31 H 0.417 0.583 32 H 0.060 0.940 33 H 0.076 0.924 34 H 0.066 0.934 35 H 0.126 0.874 36 H 0.235 0.765 37 H 0.213 0.787 38 H 0.128 0.872 39 H 0.104 0.896 40 H 0.184 0.816 41 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.874 1.689 -6.191 7.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.186 4.186 3 Si 0.668 3.332 4 C -0.137 4.137 5 C -0.046 4.046 6 C -0.157 4.157 7 C 0.347 3.653 8 O -0.457 6.457 9 N -0.358 5.358 10 C 0.008 3.992 11 C -0.134 4.134 12 H 0.132 0.868 13 C -0.168 4.168 14 C -0.005 4.005 15 H 0.145 0.855 16 N -0.062 5.062 17 C -0.185 4.185 18 C -0.226 4.226 19 N -0.184 5.184 20 N -0.109 5.109 21 C -0.157 4.157 22 C -0.063 4.063 23 C -0.164 4.164 24 C 0.069 3.931 25 F -0.104 7.104 26 H 0.260 0.740 27 H 0.120 0.880 28 H -0.242 1.242 29 H -0.184 1.184 30 H 0.154 0.846 31 H 0.256 0.744 32 H 0.079 0.921 33 H 0.094 0.906 34 H 0.085 0.915 35 H 0.144 0.856 36 H 0.251 0.749 37 H 0.230 0.770 38 H 0.146 0.854 39 H 0.122 0.878 40 H 0.201 0.799 41 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 2.895 0.879 -4.493 5.416 hybrid contribution 0.742 0.415 -0.324 0.910 sum 3.637 1.294 -4.817 6.173 Atomic orbital electron populations 1.86369 1.16700 1.82473 1.51684 1.24697 0.86473 1.10699 0.96714 0.94969 0.77875 0.73843 0.86482 1.19664 0.92537 1.01351 1.00147 1.20899 1.00233 0.91624 0.91884 1.20098 0.95427 1.02250 0.97880 1.18258 0.86702 0.79352 0.80982 1.90814 1.19702 1.64324 1.70881 1.45689 1.15313 1.48782 1.26025 1.21385 0.92290 0.94094 0.91422 1.22913 0.98195 0.96996 0.95343 0.86835 1.23362 0.97295 0.95891 1.00284 1.22879 0.89966 1.02441 0.85257 0.85520 1.47461 1.20956 1.27597 1.10177 1.24263 0.91478 0.99728 1.03012 1.24263 1.04373 1.02178 0.91815 1.75109 1.03767 1.12025 1.27512 1.78312 1.19308 1.21739 0.91566 1.23583 1.03419 0.95206 0.93539 1.21561 0.90207 0.95165 0.99338 1.21448 1.03252 0.98152 0.93545 1.18074 0.87327 0.94770 0.92970 1.91482 1.70812 1.72064 1.76065 0.73978 0.88037 1.24204 1.18436 0.84600 0.74389 0.92134 0.90614 0.91499 0.85606 0.74912 0.77032 0.85414 0.87798 0.79923 0.80645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.13 11.48 -148.98 -1.71 -1.84 16 2 C -0.08 0.00 2.95 71.24 0.21 0.21 16 3 Si 0.76 -0.53 30.73 68.60 2.11 1.58 16 4 C -0.14 -0.51 5.15 -19.86 -0.10 -0.62 16 5 C -0.03 -0.15 8.90 22.51 0.20 0.05 16 6 C -0.15 -0.08 5.87 -20.09 -0.12 -0.20 16 7 C 0.56 1.15 7.77 86.75 0.67 1.83 16 8 O -0.58 -6.86 16.34 -3.93 -0.06 -6.93 16 9 N -0.71 5.24 5.51 -466.08 -2.57 2.68 16 10 C 0.13 -1.02 5.50 86.38 0.47 -0.55 16 11 C -0.12 1.47 3.33 -10.27 -0.03 1.44 16 12 H 0.11 -1.64 7.00 -2.39 -0.02 -1.66 16 13 C -0.13 1.18 7.44 31.12 0.23 1.41 16 14 C 0.10 -0.76 5.11 45.58 0.23 -0.52 16 15 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 16 N -0.27 0.26 3.52 -324.38 -1.14 -0.88 16 17 C -0.03 0.19 9.68 83.49 0.81 0.99 16 18 C -0.07 -0.04 12.05 83.73 1.01 0.97 16 19 N -0.32 -3.31 12.41 -58.26 -0.72 -4.03 16 20 N -0.13 -1.18 13.17 37.02 0.49 -0.69 16 21 C -0.12 1.72 6.89 31.18 0.21 1.94 16 22 C -0.04 0.31 9.54 22.52 0.21 0.52 16 23 C -0.15 0.66 10.01 22.27 0.22 0.88 16 24 C 0.09 0.16 6.66 22.47 0.15 0.31 16 25 F -0.13 -0.48 12.87 44.97 0.58 0.10 16 26 H 0.41 -4.20 8.74 -74.06 -0.65 -4.85 16 27 H 0.10 -0.39 7.96 -2.39 -0.02 -0.41 16 28 H -0.31 -2.68 7.11 99.48 0.71 -1.97 16 29 H -0.26 -0.96 5.40 99.48 0.54 -0.42 16 30 H 0.14 1.29 6.72 -2.91 -0.02 1.27 16 31 H 0.42 -6.32 6.50 -92.71 -0.60 -6.92 16 32 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.08 -0.50 7.87 -2.38 -0.02 -0.52 16 34 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 35 H 0.13 -1.43 8.10 -2.39 -0.02 -1.45 16 36 H 0.23 -3.84 6.74 -2.91 -0.02 -3.86 16 37 H 0.21 -1.27 8.06 -2.91 -0.02 -1.29 16 38 H 0.13 -2.02 7.92 -2.39 -0.02 -2.04 16 39 H 0.10 -1.78 6.96 -2.39 -0.02 -1.80 16 40 H 0.18 -3.07 6.40 -2.91 -0.02 -3.09 16 41 H 0.18 -1.81 8.06 -2.91 -0.02 -1.83 16 Total: 0.00 -34.88 346.87 1.08 -33.79 By element: Atomic # 1 Polarization: -32.15 SS G_CDS: -0.28 Total: -32.42 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 4.39 Total: 8.65 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -3.94 Total: -2.93 kcal Atomic # 8 Polarization: -7.00 SS G_CDS: -1.77 Total: -8.77 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.58 Total: 0.10 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: 2.11 Total: 1.58 kcal Total: -34.88 1.08 -33.79 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.483 kcal (2) G-P(sol) polarization free energy of solvation -34.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.795 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds