Wall clock time and date at job start Sun Mar 7 2021 13:27:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.46985 * 2 1 4 4 C 1.50696 * 109.47127 * 119.99507 * 2 1 3 5 5 C 1.38267 * 119.93875 * 65.00699 * 4 2 1 6 6 C 1.38152 * 120.05444 * 179.97438 * 5 4 2 7 7 C 1.38739 * 119.94049 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05094 * 180.02562 * 7 6 5 9 9 C 1.42898 * 116.99538 * 180.02562 * 8 7 6 10 10 C 1.52995 * 109.46860 * 179.97438 * 9 8 7 11 11 C 1.50706 * 109.47133 * 179.97438 * 10 9 8 12 12 O 1.21279 * 119.99655 * 0.02562 * 11 10 9 13 13 N 1.34781 * 119.99939 * 180.02562 * 11 10 9 14 14 C 1.46494 * 119.99588 * 180.02562 * 13 11 10 15 15 C 1.53010 * 109.47013 * 180.02562 * 14 13 11 16 16 H 1.09001 * 112.84086 * 316.19617 * 15 14 13 17 17 C 1.54052 * 113.62097 * 87.50180 * 15 14 13 18 18 C 1.53780 * 86.98283 * 139.97933 * 17 15 14 19 19 H 1.08998 * 113.61483 * 219.98091 * 18 17 15 20 20 N 1.46501 * 113.61201 * 89.16447 * 18 17 15 21 21 C 1.35316 * 125.86780 * 345.85703 * 20 18 17 22 22 C 1.35355 * 106.17300 * 179.97438 * 21 20 18 23 23 N 1.33768 * 106.49655 * 0.02562 * 22 21 20 24 24 N 1.28635 * 108.88723 * 359.97438 * 23 22 21 25 25 C 1.53774 * 87.17516 * 334.57374 * 18 17 15 26 26 C 1.38728 * 119.88767 * 0.27973 * 7 6 5 27 27 C 1.38142 * 119.94653 * 359.46835 * 26 7 6 28 28 H 0.96705 * 114.00380 * 300.00171 * 1 2 3 29 29 H 1.09001 * 109.47136 * 240.00074 * 2 1 3 30 30 H 1.48502 * 110.00117 * 178.68338 * 3 2 1 31 31 H 1.48512 * 109.99897 * 300.00063 * 3 2 1 32 32 H 1.08001 * 119.97782 * 0.02562 * 5 4 2 33 33 H 1.07995 * 120.02802 * 180.02562 * 6 5 4 34 34 H 1.08998 * 109.47471 * 59.99993 * 9 8 7 35 35 H 1.08998 * 109.46977 * 299.99503 * 9 8 7 36 36 H 1.09008 * 109.47408 * 59.99853 * 10 9 8 37 37 H 1.08999 * 109.47786 * 299.99972 * 10 9 8 38 38 H 0.96998 * 119.99992 * 359.97438 * 13 11 10 39 39 H 1.08998 * 109.47414 * 60.00115 * 14 13 11 40 40 H 1.09003 * 109.47559 * 299.99597 * 14 13 11 41 41 H 1.09002 * 113.61142 * 25.47698 * 17 15 14 42 42 H 1.08996 * 113.69522 * 254.50039 * 17 15 14 43 43 H 1.07996 * 126.91291 * 0.25267 * 21 20 18 44 44 H 1.08002 * 126.74695 * 179.97438 * 22 21 20 45 45 H 1.09001 * 113.61743 * 140.02266 * 25 18 17 46 46 H 1.09003 * 113.61480 * 270.92259 * 25 18 17 47 47 H 1.08004 * 120.02457 * 179.72585 * 26 7 6 48 48 H 1.08001 * 119.97578 * 180.28113 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6841 -2.0604 1.3972 6 6 2.1439 -2.7141 2.5241 7 6 2.8548 -2.0147 3.4886 8 8 3.3087 -2.6555 4.5977 9 6 4.0325 -1.8723 5.5489 10 6 4.4587 -2.7589 6.7207 11 6 5.2226 -1.9331 7.7235 12 8 5.4075 -0.7517 7.5210 13 7 5.7003 -2.5075 8.8453 14 6 6.4425 -1.7046 9.8203 15 6 6.8699 -2.5915 10.9916 16 1 6.0762 -3.2579 11.3294 17 6 8.2198 -3.2996 10.7692 18 6 8.5262 -3.0035 12.2468 19 1 9.5587 -2.7043 12.4272 20 7 8.0695 -4.0521 13.1623 21 6 7.2100 -5.0516 12.8574 22 6 7.0679 -5.7843 13.9865 23 7 7.8369 -5.2044 14.9149 24 7 8.4171 -4.1809 14.3949 25 6 7.5526 -1.8187 12.1324 26 6 3.0969 -0.6589 3.3214 27 6 2.6395 -0.0111 2.1903 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2086 32 1 1.1317 -2.6047 0.6455 33 1 1.9509 -3.7687 2.6536 34 1 3.3964 -1.0669 5.9157 35 1 4.9169 -1.4488 5.0729 36 1 5.0948 -3.5647 6.3542 37 1 3.5742 -3.1822 7.1966 38 1 5.5521 -3.4523 9.0074 39 1 5.8063 -0.8992 10.1873 40 1 7.3268 -1.2809 9.3443 41 1 8.8773 -2.7776 10.0739 42 1 8.1256 -4.3625 10.5472 43 1 6.7365 -5.2315 11.9036 44 1 6.4537 -6.6636 14.1133 45 1 6.9201 -1.6869 13.0103 46 1 8.0280 -0.8926 11.8091 47 1 3.6463 -0.1114 4.0730 48 1 2.8317 1.0434 2.0575 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:27:47 Heat of formation + Delta-G solvation = 51.465698 kcal Electronic energy + Delta-G solvation = -29909.193138 eV Core-core repulsion = 25548.518843 eV Total energy + Delta-G solvation = -4360.674295 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -44.31670 -41.39856 -40.94831 -40.09795 -39.12549 -37.17100 -35.86058 -33.95835 -33.31781 -32.05460 -31.99156 -31.45901 -29.30700 -26.97966 -26.59218 -25.76462 -24.78623 -23.58566 -23.42132 -22.53399 -22.19651 -21.50256 -20.68671 -19.50428 -18.33491 -18.15877 -17.70958 -17.49511 -17.48597 -17.14762 -16.86371 -16.44507 -16.40617 -16.12452 -15.91040 -15.62111 -15.56358 -15.24285 -15.00177 -14.68810 -14.60949 -14.41758 -14.27518 -14.10784 -13.72273 -13.58716 -13.56108 -13.22517 -12.83864 -12.80727 -12.72113 -12.21165 -12.18123 -12.03755 -11.98486 -11.76412 -11.73780 -11.71147 -11.67122 -11.07048 -10.91082 -10.41362 -10.36110 -10.12195 -10.04135 -9.21285 -5.01429 0.28491 0.30671 0.62742 1.32047 1.38006 1.56394 1.60244 1.62114 1.73206 1.94993 2.50082 2.66110 3.04957 3.23055 3.47557 3.55819 3.59863 3.61135 3.69872 3.73771 3.84100 3.91570 3.93281 4.05510 4.10040 4.16410 4.26738 4.28737 4.31791 4.35602 4.43403 4.46651 4.50564 4.61017 4.66400 4.66880 4.71741 4.75364 4.78989 4.80350 4.89564 4.95672 4.97853 5.15908 5.18200 5.26072 5.28768 5.41945 5.49909 5.71902 5.72198 6.33033 6.49088 6.78419 7.19364 7.51230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.768 3.232 4 C -0.163 4.163 5 C -0.061 4.061 6 C -0.159 4.159 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.071 3.929 10 C -0.133 4.133 11 C 0.519 3.481 12 O -0.585 6.585 13 N -0.713 5.713 14 C 0.132 3.868 15 C -0.115 4.115 16 H 0.113 0.887 17 C -0.119 4.119 18 C 0.095 3.905 19 H 0.126 0.874 20 N -0.268 5.268 21 C -0.034 4.034 22 C -0.068 4.068 23 N -0.319 5.319 24 N -0.131 5.131 25 C -0.130 4.130 26 C -0.209 4.209 27 C -0.078 4.078 28 H 0.395 0.605 29 H 0.106 0.894 30 H -0.289 1.289 31 H -0.299 1.299 32 H 0.138 0.862 33 H 0.142 0.858 34 H 0.066 0.934 35 H 0.064 0.936 36 H 0.127 0.873 37 H 0.127 0.873 38 H 0.420 0.580 39 H 0.059 0.941 40 H 0.072 0.928 41 H 0.127 0.873 42 H 0.100 0.900 43 H 0.234 0.766 44 H 0.213 0.787 45 H 0.066 0.934 46 H 0.125 0.875 47 H 0.142 0.858 48 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.207 -1.780 -1.517 2.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.674 3.326 4 C -0.163 4.163 5 C -0.079 4.079 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.005 4.005 10 C -0.173 4.173 11 C 0.306 3.694 12 O -0.466 6.466 13 N -0.366 5.366 14 C 0.008 3.992 15 C -0.133 4.133 16 H 0.131 0.869 17 C -0.157 4.157 18 C -0.007 4.007 19 H 0.144 0.856 20 N -0.062 5.062 21 C -0.185 4.185 22 C -0.226 4.226 23 N -0.184 5.184 24 N -0.109 5.109 25 C -0.169 4.169 26 C -0.228 4.228 27 C -0.096 4.096 28 H 0.245 0.755 29 H 0.124 0.876 30 H -0.216 1.216 31 H -0.227 1.227 32 H 0.156 0.844 33 H 0.160 0.840 34 H 0.085 0.915 35 H 0.083 0.917 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.257 0.743 39 H 0.077 0.923 40 H 0.090 0.910 41 H 0.145 0.855 42 H 0.119 0.881 43 H 0.250 0.750 44 H 0.230 0.770 45 H 0.085 0.915 46 H 0.144 0.856 47 H 0.159 0.841 48 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.363 -0.270 -1.357 1.430 hybrid contribution -0.371 -1.082 -0.710 1.347 sum -0.008 -1.352 -2.067 2.470 Atomic orbital electron populations 1.86462 1.17309 1.82152 1.50488 1.25040 0.85186 1.10321 0.97070 0.93827 0.77847 0.75938 0.84938 1.20320 1.02750 0.95292 0.97974 1.20982 0.96691 0.93759 0.96456 1.20669 1.01811 1.01363 0.93895 1.19171 0.94519 0.91341 0.87143 1.85959 1.69226 1.38841 1.29454 1.22484 0.95771 0.93781 0.88447 1.21441 1.03086 0.99151 0.93578 1.20600 0.78728 0.87442 0.82654 1.90753 1.59924 1.18179 1.77695 1.45801 1.56054 1.14425 1.20311 1.21308 0.96230 0.93583 0.88057 1.22954 0.97798 0.98088 0.94488 0.86916 1.23590 0.96784 1.03896 0.91480 1.22853 1.00983 0.86988 0.89864 0.85631 1.47462 1.29175 1.20699 1.08846 1.24259 0.98897 0.91356 1.03988 1.24268 1.03683 1.04510 0.90141 1.75103 1.10594 1.04171 1.28532 1.78306 1.22431 1.16596 0.93571 1.23367 0.97197 0.97549 0.98759 1.21427 1.06424 0.93903 1.01008 1.20990 0.96003 0.99874 0.92719 0.75548 0.87616 1.21609 1.22670 0.84399 0.84045 0.91533 0.91740 0.85449 0.85516 0.74270 0.92262 0.90978 0.85467 0.88114 0.75011 0.77010 0.91526 0.85638 0.84072 0.83734 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.32 12.83 -148.98 -1.91 -2.23 16 2 C -0.07 0.00 2.80 71.23 0.20 0.20 16 3 Si 0.77 -1.01 29.80 68.60 2.04 1.03 16 4 C -0.16 -0.13 5.35 -19.85 -0.11 -0.24 16 5 C -0.06 -0.09 9.68 22.26 0.22 0.13 16 6 C -0.16 -0.28 9.99 22.37 0.22 -0.06 16 7 C 0.12 0.31 6.69 22.51 0.15 0.46 16 8 O -0.32 -0.32 10.14 -92.46 -0.94 -1.26 16 9 C 0.07 -0.15 4.03 71.98 0.29 0.14 16 10 C -0.13 1.10 6.07 29.85 0.18 1.28 16 11 C 0.52 -2.22 7.83 87.66 0.69 -1.53 16 12 O -0.59 -3.20 15.98 -3.03 -0.05 -3.24 16 13 N -0.71 7.71 5.56 -463.05 -2.57 5.14 16 14 C 0.13 -1.29 5.51 86.38 0.48 -0.82 16 15 C -0.11 1.56 3.33 -10.17 -0.03 1.53 16 16 H 0.11 -1.71 6.88 -2.39 -0.02 -1.73 16 17 C -0.12 1.76 6.90 31.21 0.22 1.97 16 18 C 0.09 -0.77 5.10 45.51 0.23 -0.54 16 19 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 20 N -0.27 0.29 3.52 -324.68 -1.14 -0.85 16 21 C -0.03 0.19 9.67 83.49 0.81 0.99 16 22 C -0.07 -0.04 12.05 83.73 1.01 0.97 16 23 N -0.32 -3.27 12.41 -58.25 -0.72 -3.99 16 24 N -0.13 -1.15 13.16 37.02 0.49 -0.67 16 25 C -0.13 1.27 7.44 31.12 0.23 1.50 16 26 C -0.21 -0.24 9.04 22.36 0.20 -0.04 16 27 C -0.08 0.01 8.66 22.25 0.19 0.20 16 28 H 0.39 -2.88 8.70 -74.05 -0.64 -3.53 16 29 H 0.11 0.11 7.96 -2.39 -0.02 0.09 16 30 H -0.29 -1.09 7.11 99.48 0.71 -0.39 16 31 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 32 H 0.14 -0.04 8.06 -2.91 -0.02 -0.06 16 33 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 34 H 0.07 -0.06 7.61 -2.39 -0.02 -0.08 16 35 H 0.06 -0.04 7.63 -2.39 -0.02 -0.06 16 36 H 0.13 -1.54 8.14 -2.38 -0.02 -1.56 16 37 H 0.13 -1.50 8.14 -2.39 -0.02 -1.52 16 38 H 0.42 -7.34 8.47 -92.71 -0.79 -8.13 16 39 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 40 H 0.07 -0.60 7.85 -2.39 -0.02 -0.62 16 41 H 0.13 -2.07 7.90 -2.39 -0.02 -2.09 16 42 H 0.10 -1.69 7.06 -2.39 -0.02 -1.71 16 43 H 0.23 -3.75 6.70 -2.91 -0.02 -3.77 16 44 H 0.21 -1.27 8.06 -2.91 -0.02 -1.30 16 45 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 46 H 0.13 -1.52 8.10 -2.39 -0.02 -1.54 16 47 H 0.14 -0.13 6.30 -2.91 -0.02 -0.14 16 48 H 0.15 -0.62 4.90 -2.91 -0.01 -0.64 16 Total: 0.00 -31.65 398.70 -0.01 -31.66 By element: Atomic # 1 Polarization: -31.38 SS G_CDS: -0.38 Total: -31.76 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: 5.17 Total: 6.16 kcal Atomic # 7 Polarization: 3.58 SS G_CDS: -3.95 Total: -0.37 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -2.90 Total: -6.73 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: 2.04 Total: 1.03 kcal Total: -31.65 -0.01 -31.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.129 kcal (2) G-P(sol) polarization free energy of solvation -31.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.664 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds