Wall clock time and date at job start Sun Mar 7 2021 13:28:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47074 * 2 1 4 4 C 1.50704 * 109.47208 * 240.00212 * 2 1 3 5 5 C 1.38240 * 119.94496 * 120.02048 * 4 2 1 6 6 C 1.38162 * 120.05835 * 179.97438 * 5 4 2 7 7 C 1.38707 * 119.94273 * 359.97438 * 6 5 4 8 8 O 1.35905 * 120.05953 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99302 * 0.02562 * 8 7 6 10 10 C 1.50704 * 109.46961 * 180.02562 * 9 8 7 11 11 O 1.21283 * 119.99966 * 359.97438 * 10 9 8 12 12 N 1.34779 * 120.00455 * 179.97438 * 10 9 8 13 13 C 1.46490 * 120.00169 * 179.97438 * 12 10 9 14 14 C 1.53005 * 109.47330 * 180.02562 * 13 12 10 15 15 H 1.09005 * 112.84607 * 43.80145 * 14 13 12 16 16 C 1.53775 * 113.61595 * 175.00312 * 14 13 12 17 17 C 1.53783 * 87.08122 * 139.98403 * 16 14 13 18 18 H 1.09001 * 113.60709 * 219.93433 * 17 16 14 19 19 N 1.46494 * 113.61640 * 89.11360 * 17 16 14 20 20 C 1.35305 * 125.87037 * 274.71044 * 19 17 16 21 21 C 1.35346 * 106.18117 * 179.90741 * 20 19 17 22 22 N 1.33778 * 106.49371 * 0.35487 * 21 20 19 23 23 N 1.28635 * 108.88263 * 359.77607 * 22 21 20 24 24 C 1.53776 * 113.61198 * 272.50228 * 14 13 12 25 25 C 1.38757 * 119.88748 * 359.74690 * 7 6 5 26 26 N 1.48002 * 120.02612 * 180.25761 * 25 7 6 27 27 O 1.21803 * 119.99866 * 180.25403 * 26 25 7 28 28 O 1.21803 * 120.00311 * 0.24820 * 26 25 7 29 29 C 1.38119 * 119.94418 * 0.51088 * 25 7 6 30 30 H 0.96697 * 113.99797 * 60.00149 * 1 2 3 31 31 H 1.08998 * 109.47308 * 120.00201 * 2 1 3 32 32 H 1.48498 * 109.99873 * 298.68422 * 3 2 1 33 33 H 1.48501 * 109.99510 * 60.00214 * 3 2 1 34 34 H 1.08005 * 119.97259 * 359.95209 * 5 4 2 35 35 H 1.07998 * 120.03035 * 179.97438 * 6 5 4 36 36 H 1.08997 * 109.47534 * 299.99573 * 9 8 7 37 37 H 1.08996 * 109.47957 * 60.00276 * 9 8 7 38 38 H 0.97002 * 119.99069 * 359.97438 * 12 10 9 39 39 H 1.08999 * 109.47575 * 299.99960 * 13 12 10 40 40 H 1.09006 * 109.47157 * 60.00257 * 13 12 10 41 41 H 1.09009 * 113.60989 * 254.52595 * 16 14 13 42 42 H 1.09003 * 113.61653 * 25.34647 * 16 14 13 43 43 H 1.08004 * 126.91246 * 0.02562 * 20 19 17 44 44 H 1.08001 * 126.75978 * 180.12640 * 21 20 19 45 45 H 1.08997 * 113.61665 * 334.56016 * 24 14 13 46 46 H 1.09005 * 113.61929 * 105.47130 * 24 14 13 47 47 H 1.08002 * 119.97592 * 179.77150 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7264 -0.0375 -2.1395 6 6 3.1887 -0.6867 -3.2681 7 6 2.8549 -2.0148 -3.4885 8 8 3.3079 -2.6555 -4.5982 9 6 4.1242 -1.9002 -5.4954 10 6 4.5287 -2.7687 -6.6586 11 8 4.1551 -3.9213 -6.7136 12 7 5.3057 -2.2649 -7.6379 13 6 5.6993 -3.1094 -8.7683 14 6 6.5733 -2.3007 -9.7291 15 1 7.3226 -1.6988 -9.2149 16 6 7.1419 -3.1311 -10.8918 17 6 6.8599 -1.9174 -11.7930 18 1 6.4700 -2.1843 -12.7753 19 7 7.9720 -0.9663 -11.8615 20 6 8.2120 0.0373 -10.9863 21 6 9.3310 0.6600 -11.4241 22 7 9.7115 0.0203 -12.5358 23 7 8.8855 -0.9381 -12.7679 24 6 5.7705 -1.5198 -10.7829 25 6 2.0615 -2.6896 -2.5717 26 7 1.7081 -4.1085 -2.8009 27 8 1.0078 -4.6990 -1.9982 28 8 2.1175 -4.6856 -3.7924 29 6 1.5975 -2.0346 -1.4477 30 1 -0.3933 0.4417 -0.7650 31 1 1.7924 -0.5138 0.8899 32 1 1.5878 2.4586 -1.2242 33 1 1.5615 2.4678 1.2086 34 1 2.9862 0.9966 -1.9674 35 1 3.8095 -0.1605 -3.9781 36 1 3.5625 -1.0411 -5.8621 37 1 5.0159 -1.5547 -4.9722 38 1 5.6042 -1.3429 -7.5940 39 1 6.2615 -3.9682 -8.4018 40 1 4.8076 -3.4552 -9.2913 41 1 8.2025 -3.3600 -10.7870 42 1 6.5418 -4.0075 -11.1368 43 1 7.6290 0.2894 -10.1128 44 1 9.8187 1.5090 -10.9682 45 1 4.7948 -1.9549 -10.9993 46 1 5.7239 -0.4479 -10.5905 47 1 0.9769 -2.5583 -0.7356 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:28:22 Heat of formation + Delta-G solvation = 64.714843 kcal Electronic energy + Delta-G solvation = -35004.516459 eV Core-core repulsion = 29968.937874 eV Total energy + Delta-G solvation = -5035.578585 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -44.29145 -43.27897 -41.75648 -40.92772 -40.15893 -39.32339 -37.61387 -37.46737 -35.87258 -33.92343 -33.46263 -32.25853 -31.97352 -30.72247 -28.49000 -27.80995 -26.96083 -26.54449 -25.15959 -23.97945 -23.55128 -22.83537 -22.53897 -21.77479 -20.73885 -20.49788 -19.76212 -19.19754 -18.62494 -18.60003 -18.24517 -17.98087 -17.58709 -17.36894 -17.20823 -16.86472 -16.37020 -16.32637 -16.08060 -16.02456 -15.66782 -15.48882 -15.33899 -14.91115 -14.88098 -14.69272 -14.03689 -13.96792 -13.71723 -13.66228 -13.56398 -13.21607 -13.19298 -12.69981 -12.69596 -12.37889 -12.33773 -12.26326 -12.20573 -12.17814 -11.96033 -11.80807 -11.72456 -11.64900 -11.04212 -10.88712 -10.82121 -10.74455 -10.33286 -10.16182 -9.77818 -4.90812 -1.30095 -0.22414 0.17170 0.37033 0.66012 1.23930 1.28326 1.40228 1.50459 1.61487 1.63369 2.03736 2.06793 2.34975 3.04829 3.13045 3.22789 3.28439 3.36684 3.46678 3.48489 3.62156 3.70088 3.73186 3.74289 3.78726 3.97789 4.05660 4.12487 4.17094 4.30206 4.31473 4.34109 4.41051 4.45350 4.57140 4.62408 4.65744 4.68553 4.76155 4.80450 4.86069 4.90432 4.97473 5.09271 5.16485 5.20930 5.28960 5.37855 5.74540 5.78653 6.42496 6.45799 6.48995 7.20313 7.54251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.791 3.209 4 C -0.148 4.148 5 C -0.004 4.004 6 C -0.187 4.187 7 C 0.195 3.805 8 O -0.293 6.293 9 C 0.023 3.977 10 C 0.506 3.494 11 O -0.569 6.569 12 N -0.704 5.704 13 C 0.133 3.867 14 C -0.111 4.111 15 H 0.118 0.882 16 C -0.133 4.133 17 C 0.095 3.905 18 H 0.123 0.877 19 N -0.268 5.268 20 C -0.031 4.031 21 C -0.069 4.069 22 N -0.321 5.321 23 N -0.133 5.133 24 C -0.118 4.118 25 C -0.105 4.105 26 N 0.034 4.966 27 O -0.208 6.208 28 O -0.171 6.171 29 C -0.005 4.005 30 H 0.389 0.611 31 H 0.126 0.874 32 H -0.259 1.259 33 H -0.311 1.311 34 H 0.189 0.811 35 H 0.209 0.791 36 H 0.146 0.854 37 H 0.146 0.854 38 H 0.424 0.576 39 H 0.056 0.944 40 H 0.069 0.931 41 H 0.065 0.935 42 H 0.122 0.878 43 H 0.238 0.762 44 H 0.214 0.786 45 H 0.125 0.875 46 H 0.106 0.894 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.708 13.892 2.421 14.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.199 4.199 3 Si 0.693 3.307 4 C -0.149 4.149 5 C -0.022 4.022 6 C -0.205 4.205 7 C 0.145 3.855 8 O -0.203 6.203 9 C -0.054 4.054 10 C 0.292 3.708 11 O -0.446 6.446 12 N -0.360 5.360 13 C 0.009 3.991 14 C -0.130 4.130 15 H 0.136 0.864 16 C -0.172 4.172 17 C -0.007 4.007 18 H 0.141 0.859 19 N -0.062 5.062 20 C -0.183 4.183 21 C -0.227 4.227 22 N -0.185 5.185 23 N -0.112 5.112 24 C -0.156 4.156 25 C -0.191 4.191 26 N 0.544 4.456 27 O -0.414 6.414 28 O -0.385 6.385 29 C -0.024 4.024 30 H 0.239 0.761 31 H 0.144 0.856 32 H -0.185 1.185 33 H -0.240 1.240 34 H 0.206 0.794 35 H 0.226 0.774 36 H 0.163 0.837 37 H 0.164 0.836 38 H 0.263 0.737 39 H 0.074 0.926 40 H 0.088 0.912 41 H 0.084 0.916 42 H 0.140 0.860 43 H 0.254 0.746 44 H 0.231 0.769 45 H 0.143 0.857 46 H 0.125 0.875 47 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.975 13.299 1.622 13.724 hybrid contribution -1.612 -0.621 0.371 1.767 sum 1.363 12.677 1.993 12.905 Atomic orbital electron populations 1.86635 1.18559 1.80464 1.50340 1.25536 0.83580 1.13166 0.97605 0.94187 0.89214 0.69834 0.77446 1.20372 1.02177 0.92554 0.99844 1.21727 0.89324 1.01312 0.89802 1.21825 1.06037 0.90363 1.02299 1.18962 0.89580 0.92054 0.84910 1.86474 1.63675 1.39848 1.30295 1.23165 0.98228 0.94538 0.89464 1.20510 0.78681 0.87591 0.84057 1.90868 1.55191 1.20371 1.78219 1.45550 1.51600 1.16929 1.21887 1.21300 0.98349 0.93276 0.86136 1.22891 0.98115 0.97750 0.94204 0.86359 1.23378 1.02718 0.97011 0.94102 1.22830 0.84958 0.89649 1.03219 0.85866 1.47453 1.19699 1.22221 1.16836 1.24295 1.01252 0.92115 1.00616 1.24290 0.98220 1.04656 0.95537 1.75111 1.21466 1.04618 1.17334 1.78324 0.99018 1.18780 1.15064 1.23540 0.97138 1.03413 0.91484 1.20872 1.13644 0.81318 1.03221 1.43921 0.98193 1.04074 0.99420 1.94511 1.36264 1.68511 1.42128 1.94671 1.55981 1.69376 1.18514 1.20833 0.94155 0.94817 0.92568 0.76149 0.85647 1.18460 1.23988 0.79392 0.77380 0.83684 0.83638 0.73731 0.92551 0.91238 0.91569 0.86006 0.74583 0.76941 0.85668 0.87519 0.83420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.34 12.77 -148.98 -1.90 -0.56 16 2 C -0.09 0.70 2.82 71.24 0.20 0.90 16 3 Si 0.79 -9.05 29.78 68.60 2.04 -7.01 16 4 C -0.15 1.10 5.39 -19.85 -0.11 0.99 16 5 C 0.00 0.06 8.66 22.25 0.19 0.25 16 6 C -0.19 2.56 9.04 22.36 0.20 2.76 16 7 C 0.19 -0.40 6.67 22.51 0.15 -0.25 16 8 O -0.29 -0.41 7.68 -63.46 -0.49 -0.89 16 9 C 0.02 -0.26 5.22 71.24 0.37 0.11 16 10 C 0.51 -1.92 7.91 87.66 0.69 -1.22 16 11 O -0.57 -6.27 16.50 16.00 0.26 -6.01 16 12 N -0.70 9.05 5.56 -463.06 -2.57 6.48 16 13 C 0.13 -1.34 5.51 86.38 0.48 -0.87 16 14 C -0.11 1.66 3.34 -10.27 -0.03 1.63 16 15 H 0.12 -2.08 7.00 -2.38 -0.02 -2.10 16 16 C -0.13 1.34 7.44 31.12 0.23 1.57 16 17 C 0.10 -0.86 5.11 45.52 0.23 -0.63 16 18 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 19 N -0.27 0.65 3.52 -324.67 -1.14 -0.49 16 20 C -0.03 0.24 9.68 83.49 0.81 1.05 16 21 C -0.07 0.08 12.05 83.73 1.01 1.09 16 22 N -0.32 -2.91 12.41 -58.25 -0.72 -3.64 16 23 N -0.13 -1.06 13.16 37.02 0.49 -0.57 16 24 C -0.12 1.92 6.88 31.12 0.21 2.13 16 25 C -0.11 -0.54 6.87 36.47 0.25 -0.29 16 26 N 0.03 0.52 4.45 -46.24 -0.21 0.32 16 27 O -0.21 -3.69 18.45 18.88 0.35 -3.34 16 28 O -0.17 -3.41 17.24 25.60 0.44 -2.97 16 29 C 0.00 0.00 9.12 22.25 0.20 0.20 16 30 H 0.39 -3.46 8.70 -74.06 -0.64 -4.10 16 31 H 0.13 -0.99 7.96 -2.39 -0.02 -1.01 16 32 H -0.26 2.74 7.11 99.48 0.71 3.45 16 33 H -0.31 0.31 7.11 99.48 0.71 1.01 16 34 H 0.19 -4.07 4.87 -2.91 -0.01 -4.08 16 35 H 0.21 -5.10 6.30 -2.91 -0.02 -5.11 16 36 H 0.15 -2.99 7.66 -2.39 -0.02 -3.01 16 37 H 0.15 -2.98 7.66 -2.39 -0.02 -3.00 16 38 H 0.42 -9.43 8.47 -92.71 -0.79 -10.22 16 39 H 0.06 -0.29 8.14 -2.39 -0.02 -0.30 16 40 H 0.07 -0.53 7.85 -2.38 -0.02 -0.55 16 41 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 42 H 0.12 -1.40 8.10 -2.39 -0.02 -1.42 16 43 H 0.24 -4.56 6.75 -2.91 -0.02 -4.58 16 44 H 0.21 -1.70 8.06 -2.91 -0.02 -1.72 16 45 H 0.13 -2.16 7.90 -2.39 -0.02 -2.18 16 46 H 0.11 -2.10 6.97 -2.38 -0.02 -2.11 16 47 H 0.15 0.41 7.61 -2.91 -0.02 0.39 16 Total: 0.00 -52.66 403.73 1.33 -51.33 By element: Atomic # 1 Polarization: -41.76 SS G_CDS: -0.32 Total: -42.08 kcal Atomic # 6 Polarization: 4.34 SS G_CDS: 5.09 Total: 9.43 kcal Atomic # 7 Polarization: 6.25 SS G_CDS: -4.16 Total: 2.10 kcal Atomic # 8 Polarization: -12.44 SS G_CDS: -1.34 Total: -13.77 kcal Atomic # 14 Polarization: -9.05 SS G_CDS: 2.04 Total: -7.01 kcal Total: -52.66 1.33 -51.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.048 kcal (2) G-P(sol) polarization free energy of solvation -52.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.333 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.715 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds