Wall clock time and date at job start Sun Mar 7 2021 13:28:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35893 * 116.99742 * 2 1 4 4 C 1.38624 * 120.02625 * 180.22776 * 3 2 1 5 5 C 1.38653 * 119.88982 * 180.27410 * 4 3 2 6 6 O 1.35897 * 120.02761 * 179.77026 * 5 4 3 7 7 C 1.42905 * 116.99744 * 359.72163 * 6 5 4 8 8 C 1.50703 * 109.46915 * 180.02562 * 7 6 5 9 9 O 1.21279 * 119.99926 * 359.97438 * 8 7 6 10 10 N 1.34775 * 119.99773 * 180.02562 * 8 7 6 11 11 C 1.46504 * 119.99531 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.46883 * 179.97438 * 11 10 8 13 13 H 1.09001 * 112.85085 * 316.19877 * 12 11 10 14 14 C 1.53780 * 113.60990 * 87.50549 * 12 11 10 15 15 C 1.53779 * 87.07832 * 139.98388 * 14 12 11 16 16 H 1.09008 * 113.61352 * 220.01898 * 15 14 12 17 17 N 1.46500 * 113.61853 * 89.11789 * 15 14 12 18 18 C 1.35309 * 125.86416 * 347.21436 * 17 15 14 19 19 C 1.35351 * 106.17707 * 179.90919 * 18 17 15 20 20 N 1.33782 * 106.49439 * 0.35093 * 19 18 17 21 21 N 1.28631 * 108.88134 * 359.77607 * 20 19 18 22 22 C 1.53779 * 113.61334 * 185.00127 * 12 11 10 23 23 C 1.38752 * 119.94663 * 359.49442 * 5 4 3 24 24 C 1.50699 * 119.97578 * 180.27365 * 23 5 4 25 25 O 1.42899 * 109.47015 * 285.00452 * 24 23 5 26 26 Si 1.86295 * 109.47148 * 164.99797 * 24 23 5 27 27 C 1.38197 * 120.05290 * 0.25251 * 23 5 4 28 28 C 1.38157 * 120.11053 * 0.02562 * 27 23 5 29 29 H 1.09000 * 109.46914 * 60.00380 * 1 2 3 30 30 H 1.09006 * 109.47182 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47941 * 300.00055 * 1 2 3 32 32 H 1.08001 * 120.05097 * 0.02562 * 4 3 2 33 33 H 1.08998 * 109.46619 * 60.00395 * 7 6 5 34 34 H 1.08993 * 109.47057 * 299.99825 * 7 6 5 35 35 H 0.96992 * 120.00503 * 359.97438 * 10 8 7 36 36 H 1.09001 * 109.46891 * 60.00097 * 11 10 8 37 37 H 1.08993 * 109.47378 * 299.99469 * 11 10 8 38 38 H 1.09008 * 113.61183 * 254.53053 * 14 12 11 39 39 H 1.08990 * 113.61811 * 25.43244 * 14 12 11 40 40 H 1.07995 * 126.91607 * 0.02562 * 18 17 15 41 41 H 1.07996 * 126.75859 * 180.12321 * 19 18 17 42 42 H 1.08997 * 113.61320 * 334.57072 * 22 12 11 43 43 H 1.09003 * 113.61175 * 105.38912 * 22 12 11 44 44 H 1.09006 * 109.47005 * 45.00046 * 24 23 5 45 45 H 0.96703 * 113.99902 * 299.98944 * 25 24 23 46 46 H 1.48505 * 110.00067 * 179.97438 * 26 24 23 47 47 H 1.48497 * 110.00164 * 301.32221 * 26 24 23 48 48 H 1.08004 * 119.94443 * 179.97438 * 27 23 5 49 49 H 1.08003 * 119.97359 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0458 1.2108 0.0000 4 6 3.4301 1.2841 -0.0048 5 6 4.0566 2.5210 0.0010 6 8 5.4135 2.5960 0.0011 7 6 6.1316 1.3605 0.0012 8 6 7.6124 1.6401 0.0019 9 8 8.0134 2.7847 0.0017 10 7 8.4911 0.6182 0.0016 11 6 9.9307 0.8902 0.0017 12 6 10.6996 -0.4327 0.0020 13 1 10.2854 -1.1629 0.6973 14 6 10.9562 -0.9962 -1.4057 15 6 12.3553 -1.3932 -0.9061 16 1 13.1444 -1.2262 -1.6393 17 7 12.4074 -2.7289 -0.3066 18 6 11.3398 -3.4812 0.0472 19 6 11.8407 -4.6317 0.5546 20 7 13.1730 -4.5251 0.4943 21 7 13.4765 -3.3862 -0.0208 22 6 12.2227 -0.2599 0.1249 23 6 3.2970 3.6821 0.0009 24 6 3.9773 5.0269 0.0009 25 8 4.5034 5.2945 1.3023 26 14 2.7438 6.3468 -0.4538 27 6 1.9172 3.6065 0.0004 28 6 1.2905 2.3752 0.0004 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3635 0.5138 0.8899 32 1 4.0196 0.3791 -0.0089 33 1 5.8699 0.7882 -0.8888 34 1 5.8698 0.7883 0.8912 35 1 8.1705 -0.2972 0.0013 36 1 10.1923 1.4622 0.8919 37 1 10.1924 1.4626 -0.8881 38 1 10.3242 -1.8482 -1.6568 39 1 10.9707 -0.2345 -2.1850 40 1 10.2977 -3.2176 -0.0563 41 1 11.2762 -5.4694 0.9366 42 1 12.5833 0.7032 -0.2360 43 1 12.6130 -0.5160 1.1099 44 1 4.7898 5.0230 -0.7257 45 1 3.8348 5.3130 2.0007 46 1 3.4021 7.6779 -0.4568 47 1 2.1658 6.0625 -1.7918 48 1 1.3276 4.5114 0.0007 49 1 0.2120 2.3187 -0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:28:44 Heat of formation + Delta-G solvation = 25.271798 kcal Electronic energy + Delta-G solvation = -33285.958088 eV Core-core repulsion = 28605.465749 eV Total energy + Delta-G solvation = -4680.492340 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -44.32971 -41.82939 -41.05607 -40.30224 -39.69741 -38.28400 -36.91492 -35.92708 -33.95482 -32.28211 -32.01370 -31.56288 -30.35773 -28.48315 -28.18985 -26.99787 -26.10479 -25.21134 -23.61065 -23.58619 -22.58531 -22.48058 -21.76606 -20.75161 -19.92648 -18.72979 -18.17363 -17.97598 -17.83449 -17.58544 -17.42058 -17.15369 -16.85072 -16.69103 -16.50719 -16.28300 -16.07006 -15.80394 -15.63981 -15.46996 -15.13887 -15.00000 -14.84964 -14.54212 -14.45621 -13.91258 -13.85585 -13.61409 -13.48673 -13.30883 -13.23480 -13.14650 -12.74546 -12.46484 -12.26729 -12.23241 -12.01383 -12.00269 -11.86280 -11.76837 -11.69155 -11.61443 -11.08760 -10.93144 -10.37173 -10.35143 -10.23303 -9.68702 -9.08957 -5.03250 0.21898 0.31404 0.61677 1.32205 1.36242 1.41712 1.44232 1.59284 1.64758 1.98775 2.26092 2.56018 2.59172 3.01393 3.19725 3.41514 3.56047 3.60974 3.62020 3.68295 3.75007 3.84553 3.95483 4.02999 4.08061 4.09444 4.12291 4.17944 4.26480 4.29917 4.35762 4.39956 4.41261 4.44704 4.48159 4.58274 4.62250 4.63811 4.70307 4.75924 4.81112 4.85249 4.92899 5.03038 5.11122 5.24749 5.24856 5.29011 5.31229 5.48985 5.70345 6.13348 6.36550 6.43616 6.86529 7.09992 7.50165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.163 3.837 4 C -0.253 4.253 5 C 0.174 3.826 6 O -0.306 6.306 7 C 0.033 3.967 8 C 0.513 3.487 9 O -0.571 6.571 10 N -0.706 5.706 11 C 0.133 3.867 12 C -0.114 4.114 13 H 0.115 0.885 14 C -0.119 4.119 15 C 0.097 3.903 16 H 0.127 0.873 17 N -0.268 5.268 18 C -0.033 4.033 19 C -0.068 4.068 20 N -0.319 5.319 21 N -0.130 5.130 22 C -0.130 4.130 23 C -0.203 4.203 24 C -0.067 4.067 25 O -0.558 6.558 26 Si 0.792 3.208 27 C -0.032 4.032 28 C -0.238 4.238 29 H 0.068 0.932 30 H 0.115 0.885 31 H 0.070 0.930 32 H 0.154 0.846 33 H 0.123 0.877 34 H 0.121 0.879 35 H 0.422 0.578 36 H 0.058 0.942 37 H 0.072 0.928 38 H 0.103 0.897 39 H 0.127 0.873 40 H 0.234 0.766 41 H 0.214 0.786 42 H 0.124 0.876 43 H 0.067 0.933 44 H 0.081 0.919 45 H 0.391 0.609 46 H -0.305 1.305 47 H -0.280 1.280 48 H 0.165 0.835 49 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.456 -3.025 -0.603 11.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.117 3.883 4 C -0.272 4.272 5 C 0.128 3.872 6 O -0.218 6.218 7 C -0.045 4.045 8 C 0.298 3.702 9 O -0.449 6.449 10 N -0.361 5.361 11 C 0.010 3.990 12 C -0.133 4.133 13 H 0.133 0.867 14 C -0.157 4.157 15 C -0.005 4.005 16 H 0.145 0.855 17 N -0.062 5.062 18 C -0.185 4.185 19 C -0.226 4.226 20 N -0.184 5.184 21 N -0.109 5.109 22 C -0.169 4.169 23 C -0.205 4.205 24 C -0.175 4.175 25 O -0.365 6.365 26 Si 0.696 3.304 27 C -0.049 4.049 28 C -0.257 4.257 29 H 0.086 0.914 30 H 0.134 0.866 31 H 0.089 0.911 32 H 0.172 0.828 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.260 0.740 36 H 0.076 0.924 37 H 0.090 0.910 38 H 0.122 0.878 39 H 0.145 0.855 40 H 0.250 0.750 41 H 0.230 0.770 42 H 0.142 0.858 43 H 0.086 0.914 44 H 0.099 0.901 45 H 0.240 0.760 46 H -0.233 1.233 47 H -0.207 1.207 48 H 0.182 0.818 49 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -9.018 -1.600 -1.523 9.285 hybrid contribution -0.379 -0.863 -0.129 0.951 sum -9.397 -2.463 -1.651 9.854 Atomic orbital electron populations 1.23403 0.75990 1.05685 1.02741 1.86051 1.23760 1.26577 1.87934 1.18887 0.91664 0.85039 0.92723 1.20550 0.93455 0.97358 1.15821 1.18607 0.81726 0.93265 0.93638 1.86224 1.15590 1.31830 1.88170 1.22764 0.88584 0.86458 1.06650 1.20443 0.88533 0.85198 0.75987 1.90792 1.80777 1.23424 1.49939 1.45606 1.06090 1.09522 1.74889 1.21336 0.78446 0.96841 1.02370 1.22909 0.94898 0.96828 0.98632 0.86680 1.23544 0.91804 1.02989 0.97403 1.22822 1.03584 0.76579 0.97504 0.85529 1.47451 1.04627 1.15098 1.39037 1.24260 0.97081 0.92674 1.04464 1.24272 0.90705 1.01459 1.06156 1.75109 1.16318 1.10583 1.16341 1.78308 1.12707 1.01891 1.17987 1.23369 0.95735 0.98708 0.99124 1.19739 0.93817 0.94044 1.12872 1.25102 1.04311 0.99636 0.88471 1.86541 1.39277 1.93722 1.16973 0.94123 0.80452 0.73151 0.82627 1.20860 0.91564 0.98598 0.93918 1.21446 1.01778 0.91218 1.11243 0.91372 0.86639 0.91099 0.82840 0.85908 0.86112 0.74028 0.92385 0.91005 0.87845 0.85531 0.74979 0.76971 0.85765 0.91433 0.90099 0.76020 1.23307 1.20671 0.81766 0.82234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.13 9.81 113.37 1.11 0.99 16 2 O -0.33 0.31 10.49 -92.35 -0.97 -0.66 16 3 C 0.16 0.00 6.68 22.49 0.15 0.15 16 4 C -0.25 -0.14 8.97 22.46 0.20 0.06 16 5 C 0.17 0.75 6.66 22.49 0.15 0.90 16 6 O -0.31 -2.18 8.99 -73.35 -0.66 -2.84 16 7 C 0.03 -0.09 5.22 71.24 0.37 0.29 16 8 C 0.51 0.86 7.91 87.66 0.69 1.55 16 9 O -0.57 -8.11 16.50 16.01 0.26 -7.85 16 10 N -0.71 5.41 5.56 -463.05 -2.57 2.84 16 11 C 0.13 -0.92 5.51 86.38 0.48 -0.44 16 12 C -0.11 1.36 3.33 -10.27 -0.03 1.33 16 13 H 0.12 -1.60 6.96 -2.39 -0.02 -1.61 16 14 C -0.12 1.61 6.88 31.12 0.21 1.83 16 15 C 0.10 -0.69 5.11 45.52 0.23 -0.45 16 16 H 0.13 -0.89 8.14 -2.38 -0.02 -0.91 16 17 N -0.27 0.09 3.52 -324.67 -1.14 -1.05 16 18 C -0.03 0.16 9.68 83.49 0.81 0.97 16 19 C -0.07 -0.07 12.05 83.73 1.01 0.94 16 20 N -0.32 -3.43 12.41 -58.25 -0.72 -4.16 16 21 N -0.13 -1.24 13.16 37.02 0.49 -0.75 16 22 C -0.13 1.07 7.44 31.12 0.23 1.31 16 23 C -0.20 -0.63 5.27 -19.75 -0.10 -0.73 16 24 C -0.07 -0.35 2.37 71.24 0.17 -0.18 16 25 O -0.56 -3.81 12.88 -148.98 -1.92 -5.73 16 26 Si 0.79 -0.04 29.91 68.60 2.05 2.02 16 27 C -0.03 0.08 8.65 22.24 0.19 0.27 16 28 C -0.24 0.71 9.04 22.38 0.20 0.91 16 29 H 0.07 -0.66 7.66 -2.39 -0.02 -0.68 16 30 H 0.12 -1.24 8.14 -2.38 -0.02 -1.26 16 31 H 0.07 -0.71 7.66 -2.39 -0.02 -0.73 16 32 H 0.15 -0.65 6.30 -2.91 -0.02 -0.67 16 33 H 0.12 -1.08 7.65 -2.39 -0.02 -1.10 16 34 H 0.12 -0.98 7.67 -2.39 -0.02 -0.99 16 35 H 0.42 -6.64 8.47 -92.71 -0.79 -7.42 16 36 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.07 -0.37 7.84 -2.39 -0.02 -0.39 16 38 H 0.10 -1.67 6.99 -2.38 -0.02 -1.69 16 39 H 0.13 -1.87 7.90 -2.39 -0.02 -1.89 16 40 H 0.23 -3.63 6.73 -2.91 -0.02 -3.65 16 41 H 0.21 -1.19 8.06 -2.91 -0.02 -1.21 16 42 H 0.12 -1.27 8.10 -2.39 -0.02 -1.29 16 43 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 44 H 0.08 0.87 7.82 -2.38 -0.02 0.85 16 45 H 0.39 -1.20 8.70 -74.06 -0.64 -1.84 16 46 H -0.30 -2.50 7.11 99.48 0.71 -1.80 16 47 H -0.28 -1.02 7.11 99.48 0.71 -0.31 16 48 H 0.17 -1.43 5.12 -2.91 -0.01 -1.45 16 49 H 0.16 -1.35 6.29 -2.91 -0.02 -1.36 16 Total: 0.00 -40.88 406.74 0.52 -40.35 By element: Atomic # 1 Polarization: -31.48 SS G_CDS: -0.37 Total: -31.85 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 6.08 Total: 9.68 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -3.95 Total: -3.13 kcal Atomic # 8 Polarization: -13.79 SS G_CDS: -3.28 Total: -17.07 kcal Atomic # 14 Polarization: -0.04 SS G_CDS: 2.05 Total: 2.02 kcal Total: -40.88 0.52 -40.35 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.624 kcal (2) G-P(sol) polarization free energy of solvation -40.875 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.523 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.352 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds