Wall clock time and date at job start Sun Mar 7 2021 13:28:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37643 * 125.67456 * 2 1 4 4 C 1.46671 * 126.22641 * 0.03210 * 3 2 1 5 5 O 1.21693 * 119.99796 * 4.46682 * 4 3 2 6 6 N 1.34778 * 119.99879 * 184.46974 * 4 3 2 7 7 C 1.46505 * 119.99473 * 174.66455 * 6 4 3 8 8 C 1.52999 * 109.46741 * 179.97438 * 7 6 4 9 9 H 1.09001 * 112.84959 * 314.66732 * 8 7 6 10 10 C 1.53783 * 113.61446 * 85.86240 * 8 7 6 11 11 C 1.53953 * 87.02308 * 139.95322 * 10 8 7 12 12 H 1.08998 * 113.66606 * 220.06984 * 11 10 8 13 13 N 1.46493 * 113.61658 * 89.19966 * 11 10 8 14 14 C 1.35321 * 125.86889 * 347.18059 * 13 11 10 15 15 C 1.35350 * 106.17602 * 179.90813 * 14 13 11 16 16 N 1.33776 * 106.49675 * 0.35202 * 15 14 13 17 17 N 1.28642 * 108.88537 * 359.77799 * 16 15 14 18 18 C 1.53783 * 113.61418 * 183.46408 * 8 7 6 19 19 C 1.37893 * 107.54837 * 179.76250 * 3 2 1 20 20 C 1.39871 * 107.09255 * 0.24550 * 19 3 2 21 21 Br 1.89101 * 126.07459 * 179.97438 * 20 19 3 22 22 C 1.35513 * 107.85346 * 0.02562 * 20 19 3 23 23 C 1.50704 * 125.56932 * 179.97438 * 22 20 19 24 24 O 1.42894 * 109.46804 * 209.97314 * 23 22 20 25 25 Si 1.86304 * 109.46978 * 329.97059 * 23 22 20 26 26 H 1.08993 * 109.47663 * 92.97738 * 1 2 3 27 27 H 1.09005 * 109.46495 * 212.97770 * 1 2 3 28 28 H 1.08997 * 109.47219 * 332.97128 * 1 2 3 29 29 H 0.97000 * 120.00343 * 354.65399 * 6 4 3 30 30 H 1.08997 * 109.46647 * 299.99333 * 7 6 4 31 31 H 1.08996 * 109.47459 * 60.00073 * 7 6 4 32 32 H 1.09004 * 113.61395 * 254.52855 * 10 8 7 33 33 H 1.09001 * 113.61396 * 25.42955 * 10 8 7 34 34 H 1.08003 * 126.90725 * 0.02562 * 14 13 11 35 35 H 1.07992 * 126.74967 * 180.13112 * 15 14 13 36 36 H 1.08994 * 113.61814 * 334.57444 * 18 8 7 37 37 H 1.09007 * 113.61038 * 105.38687 * 18 8 7 38 38 H 1.07995 * 126.45027 * 180.27778 * 19 3 2 39 39 H 1.08996 * 109.46941 * 89.97181 * 23 22 20 40 40 H 0.96701 * 114.00516 * 179.97438 * 24 23 22 41 41 H 1.48507 * 109.99576 * 178.68407 * 25 23 22 42 42 H 1.48492 * 110.00117 * 300.00208 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5123 0.0007 5 8 0.6243 2.7641 0.0834 6 7 2.7087 3.5143 -0.0904 7 6 2.2488 4.9004 -0.2076 8 6 3.4583 5.8334 -0.2936 9 1 4.2287 5.5965 0.4402 10 6 4.0009 6.0084 -1.7218 11 6 4.2020 7.4953 -1.3771 12 1 3.9407 8.1722 -2.1905 13 7 5.5116 7.7899 -0.7905 14 6 6.3952 6.8769 -0.3248 15 6 7.4627 7.5790 0.1220 16 7 7.1803 8.8706 -0.0823 17 7 6.0172 8.9618 -0.6243 18 6 3.0843 7.3245 -0.3348 19 6 3.5782 0.6891 0.0054 20 6 3.5529 -0.7093 0.0030 21 35 5.0610 -1.8502 0.0075 22 6 2.2558 -1.1015 -0.0043 23 6 1.7714 -2.5285 -0.0097 24 8 0.5166 -2.6030 -0.6892 25 14 3.0163 -3.6035 -0.8847 26 1 -0.3634 -0.0534 -1.0262 27 1 -0.3632 -0.8622 0.5594 28 1 -0.3633 0.9154 0.4670 29 1 3.6585 3.3179 -0.0782 30 1 1.6424 5.0071 -1.1070 31 1 1.6515 5.1601 0.6664 32 1 4.9320 5.4717 -1.9040 33 1 3.2538 5.8370 -2.4968 34 1 6.2739 5.8038 -0.3137 35 1 8.3634 7.1760 0.5607 36 1 2.0862 7.5136 -0.7297 37 1 3.2751 7.8485 0.6019 38 1 4.4582 1.3151 0.0111 39 1 1.6500 -2.8748 1.0166 40 1 0.1444 -3.4945 -0.7315 41 1 2.5654 -5.0184 -0.8691 42 1 3.1909 -3.1416 -2.2851 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:28:49 Heat of formation + Delta-G solvation = 114.640430 kcal Electronic energy + Delta-G solvation = -28204.208722 eV Core-core repulsion = 24043.475927 eV Total energy + Delta-G solvation = -4160.732795 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.058 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -44.28231 -42.84664 -40.80971 -39.85534 -37.92785 -36.03471 -34.57808 -33.92269 -32.53688 -31.96283 -31.29579 -29.43690 -27.37286 -26.98384 -26.80448 -25.00148 -23.54422 -23.17289 -22.55580 -21.55994 -20.86023 -20.36870 -18.94623 -18.59260 -18.03600 -17.40098 -17.38797 -17.03535 -16.88983 -16.41798 -16.12886 -15.79407 -15.61193 -15.41768 -15.00722 -14.83043 -14.65094 -14.57726 -14.26797 -14.00703 -13.89744 -13.76028 -13.56036 -13.23960 -13.14946 -12.94157 -12.76939 -12.70368 -12.17949 -12.01351 -11.95648 -11.72617 -11.65436 -11.56492 -11.17271 -10.92332 -10.81284 -10.32723 -10.22975 -9.85609 -9.28272 -4.68431 0.17749 0.36333 0.66098 0.90791 1.26503 1.41061 1.42668 1.58694 1.63575 1.95129 2.16694 2.28439 2.93817 3.05498 3.25058 3.45635 3.48312 3.61024 3.66155 3.72591 3.81607 4.12671 4.16543 4.17544 4.21632 4.31166 4.31467 4.34622 4.41150 4.44883 4.62578 4.64954 4.66539 4.68755 4.76014 4.80769 4.90656 4.97955 5.16537 5.26634 5.29307 5.36703 5.63410 5.75087 5.80099 6.40925 6.43180 7.06814 7.54365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.392 5.392 3 C -0.062 4.062 4 C 0.590 3.410 5 O -0.580 6.580 6 N -0.699 5.699 7 C 0.136 3.864 8 C -0.115 4.115 9 H 0.115 0.885 10 C -0.121 4.121 11 C 0.096 3.904 12 H 0.126 0.874 13 N -0.268 5.268 14 C -0.033 4.033 15 C -0.068 4.068 16 N -0.320 5.320 17 N -0.131 5.131 18 C -0.128 4.128 19 C -0.087 4.087 20 C -0.195 4.195 21 Br 0.093 6.907 22 C 0.093 3.907 23 C -0.044 4.044 24 O -0.557 6.557 25 Si 0.621 3.379 26 H 0.074 0.926 27 H 0.100 0.900 28 H 0.095 0.905 29 H 0.419 0.581 30 H 0.075 0.925 31 H 0.063 0.937 32 H 0.102 0.898 33 H 0.127 0.873 34 H 0.235 0.765 35 H 0.213 0.787 36 H 0.126 0.874 37 H 0.067 0.933 38 H 0.195 0.805 39 H 0.110 0.890 40 H 0.402 0.598 41 H -0.255 1.255 42 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.195 -5.474 1.065 5.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.064 5.064 3 C -0.175 4.175 4 C 0.378 3.622 5 O -0.461 6.461 6 N -0.351 5.351 7 C 0.013 3.987 8 C -0.134 4.134 9 H 0.133 0.867 10 C -0.159 4.159 11 C -0.006 4.006 12 H 0.144 0.856 13 N -0.062 5.062 14 C -0.184 4.184 15 C -0.226 4.226 16 N -0.184 5.184 17 N -0.110 5.110 18 C -0.167 4.167 19 C -0.113 4.113 20 C -0.280 4.280 21 Br 0.177 6.823 22 C -0.030 4.030 23 C -0.154 4.154 24 O -0.368 6.368 25 Si 0.523 3.477 26 H 0.092 0.908 27 H 0.119 0.881 28 H 0.113 0.887 29 H 0.257 0.743 30 H 0.094 0.906 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.145 0.855 34 H 0.251 0.749 35 H 0.230 0.770 36 H 0.144 0.856 37 H 0.086 0.914 38 H 0.212 0.788 39 H 0.127 0.873 40 H 0.254 0.746 41 H -0.180 1.180 42 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges 0.509 -3.994 0.182 4.031 hybrid contribution -1.264 -1.256 -0.138 1.787 sum -0.755 -5.251 0.044 5.305 Atomic orbital electron populations 1.22321 0.74497 1.05330 1.04208 1.43925 1.07797 1.04114 1.50524 1.20238 0.90410 0.87830 1.19057 1.16941 0.85442 0.83780 0.76033 1.90808 1.17880 1.85119 1.52323 1.45438 1.10217 1.05718 1.73683 1.21375 0.96297 0.78510 1.02547 1.22911 0.97815 0.94013 0.98635 0.86743 1.23583 1.04353 0.90266 0.97652 1.22870 0.77986 1.01693 0.98028 0.85623 1.47455 1.15456 1.04652 1.38635 1.24276 0.90560 1.00152 1.03428 1.24264 1.02772 0.89076 1.06487 1.75106 1.06870 1.21484 1.14966 1.78307 1.06188 1.07034 1.19454 1.23357 0.99073 0.95487 0.98825 1.21526 0.95629 0.92245 1.01914 1.20638 0.90220 0.95255 1.21936 1.96306 1.32375 1.56360 1.97276 1.20035 0.89500 0.88437 1.05018 1.24313 0.93609 0.94776 1.02734 1.86448 1.34672 1.36380 1.79270 0.92930 0.93541 0.77878 0.83360 0.90775 0.88117 0.88659 0.74253 0.90642 0.91825 0.87907 0.85508 0.74916 0.77015 0.85611 0.91428 0.78765 0.87259 0.74622 1.18032 1.22187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.20 9.39 127.77 1.20 1.40 16 2 N -0.39 -1.33 3.16 -519.61 -1.64 -2.97 16 3 C -0.06 -0.05 6.89 40.35 0.28 0.23 16 4 C 0.59 0.54 7.77 86.44 0.67 1.21 16 5 O -0.58 -4.98 14.59 -4.33 -0.06 -5.04 16 6 N -0.70 5.50 5.54 -467.09 -2.59 2.91 16 7 C 0.14 -1.19 5.50 86.38 0.48 -0.72 16 8 C -0.12 1.51 3.33 -10.27 -0.03 1.47 16 9 H 0.11 -1.69 6.97 -2.39 -0.02 -1.70 16 10 C -0.12 1.72 6.89 31.18 0.21 1.94 16 11 C 0.10 -0.76 5.11 45.58 0.23 -0.53 16 12 H 0.13 -0.98 8.14 -2.39 -0.02 -1.00 16 13 N -0.27 0.26 3.52 -324.39 -1.14 -0.88 16 14 C -0.03 0.18 9.69 83.49 0.81 0.99 16 15 C -0.07 -0.04 12.05 83.73 1.01 0.97 16 16 N -0.32 -3.30 12.41 -58.26 -0.72 -4.02 16 17 N -0.13 -1.18 13.17 37.02 0.49 -0.69 16 18 C -0.13 1.23 7.44 31.12 0.23 1.46 16 19 C -0.09 0.35 10.34 22.58 0.23 0.59 16 20 C -0.20 0.19 6.16 22.03 0.14 0.32 16 21 Br 0.09 -0.37 28.25 -20.37 -0.58 -0.95 16 22 C 0.09 0.18 6.18 41.35 0.26 0.44 16 23 C -0.04 0.03 2.88 71.24 0.21 0.23 16 24 O -0.56 0.13 10.45 -148.98 -1.56 -1.43 16 25 Si 0.62 0.86 27.11 68.60 1.86 2.72 16 26 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 27 H 0.10 0.00 7.02 -2.38 -0.02 -0.01 16 28 H 0.09 0.45 6.07 -2.39 -0.01 0.43 16 29 H 0.42 -6.08 7.37 -92.71 -0.68 -6.76 16 30 H 0.08 -0.59 7.88 -2.39 -0.02 -0.60 16 31 H 0.06 -0.33 8.14 -2.39 -0.02 -0.34 16 32 H 0.10 -1.71 7.00 -2.39 -0.02 -1.72 16 33 H 0.13 -2.00 7.92 -2.39 -0.02 -2.01 16 34 H 0.23 -3.76 6.73 -2.91 -0.02 -3.78 16 35 H 0.21 -1.26 8.06 -2.91 -0.02 -1.28 16 36 H 0.13 -1.51 8.10 -2.39 -0.02 -1.52 16 37 H 0.07 -0.35 8.14 -2.38 -0.02 -0.37 16 38 H 0.20 -2.48 7.45 -2.91 -0.02 -2.50 16 39 H 0.11 -0.54 7.96 -2.39 -0.02 -0.56 16 40 H 0.40 -3.13 8.74 -74.06 -0.65 -3.78 16 41 H -0.26 -1.10 7.11 99.48 0.71 -0.39 16 42 H -0.30 -2.93 7.11 99.48 0.71 -2.22 16 Total: 0.00 -30.01 361.86 -0.23 -30.24 By element: Atomic # 1 Polarization: -29.70 SS G_CDS: -0.20 Total: -29.90 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 5.92 Total: 10.00 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -5.61 Total: -5.65 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -1.62 Total: -6.47 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: 1.86 Total: 2.72 kcal Atomic # 35 Polarization: -0.37 SS G_CDS: -0.58 Total: -0.95 kcal Total: -30.01 -0.23 -30.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.881 kcal (2) G-P(sol) polarization free energy of solvation -30.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.241 kcal (6) G-S(sol) free energy of system = (1) + (5) 114.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds