Wall clock time and date at job start Sun Mar 7 2021 13:29:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46899 * 110.99780 * 2 1 4 4 C 1.50703 * 109.47107 * 293.95166 * 3 2 1 5 5 O 1.21278 * 119.99985 * 0.02562 * 4 3 2 6 6 N 1.34779 * 119.99944 * 180.02562 * 4 3 2 7 7 C 1.46499 * 119.99872 * 180.02562 * 6 4 3 8 8 C 1.53000 * 109.46840 * 180.02562 * 7 6 4 9 9 H 1.09000 * 112.85142 * 314.66202 * 8 7 6 10 10 C 1.53778 * 113.61854 * 85.86223 * 8 7 6 11 11 C 1.53950 * 87.02008 * 139.94859 * 10 8 7 12 12 H 1.09002 * 113.66869 * 220.06708 * 11 10 8 13 13 N 1.46498 * 113.61192 * 89.20153 * 11 10 8 14 14 C 1.35317 * 125.86925 * 347.18267 * 13 11 10 15 15 C 1.35349 * 106.17351 * 179.90755 * 14 13 11 16 16 N 1.33767 * 106.49852 * 0.34590 * 15 14 13 17 17 N 1.28635 * 108.88916 * 359.77914 * 16 15 14 18 18 C 1.53777 * 87.11423 * 334.63767 * 11 10 8 19 19 C 1.39674 * 111.00057 * 123.95337 * 2 1 3 20 20 C 1.38887 * 120.07469 * 115.76984 * 19 2 1 21 21 C 1.50701 * 120.03922 * 0.02562 * 20 19 2 22 22 O 1.42899 * 109.47302 * 285.00139 * 21 20 19 23 23 Si 1.86298 * 109.46884 * 164.99962 * 21 20 19 24 24 C 1.38126 * 119.92301 * 179.74819 * 20 19 2 25 25 C 1.38263 * 120.07513 * 0.52788 * 24 20 19 26 26 C 1.50701 * 119.92814 * 179.76481 * 25 24 20 27 27 F 1.39894 * 109.47328 * 179.97438 * 26 25 24 28 28 F 1.39898 * 109.47283 * 299.98252 * 26 25 24 29 29 F 1.39901 * 109.46805 * 59.98259 * 26 25 24 30 30 C 1.38311 * 120.15127 * 359.75203 * 25 24 20 31 31 C 1.38086 * 120.07115 * 359.96674 * 30 25 24 32 32 H 1.09007 * 109.47292 * 60.00400 * 1 2 3 33 33 H 1.09009 * 109.47279 * 180.02562 * 1 2 3 34 34 H 1.08995 * 109.47430 * 300.00124 * 1 2 3 35 35 H 1.09002 * 109.47043 * 173.95187 * 3 2 1 36 36 H 1.09001 * 109.47354 * 53.95125 * 3 2 1 37 37 H 0.97000 * 119.99708 * 359.97438 * 6 4 3 38 38 H 1.09002 * 109.47391 * 59.99686 * 7 6 4 39 39 H 1.09001 * 109.46813 * 299.99742 * 7 6 4 40 40 H 1.09003 * 113.61363 * 254.53223 * 10 8 7 41 41 H 1.09005 * 113.61131 * 25.42909 * 10 8 7 42 42 H 1.07998 * 126.91003 * 0.02562 * 14 13 11 43 43 H 1.07999 * 126.75118 * 180.12687 * 15 14 13 44 44 H 1.09001 * 113.61353 * 270.81253 * 18 11 10 45 45 H 1.08998 * 113.69291 * 139.91770 * 18 11 10 46 46 H 1.09004 * 109.46542 * 44.99936 * 21 20 19 47 47 H 0.96698 * 113.99683 * 300.00310 * 22 21 20 48 48 H 1.48491 * 110.00328 * 58.68563 * 23 21 20 49 49 H 1.48508 * 109.99767 * 180.02562 * 23 21 20 50 50 H 1.07998 * 119.96559 * 180.27996 * 24 20 19 51 51 H 1.07993 * 119.96469 * 179.97438 * 30 25 24 52 52 H 1.08002 * 120.03348 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 -1.2985 5 8 1.0047 1.4456 -2.1407 6 7 2.0188 3.3199 -1.5238 7 6 1.6698 3.9769 -2.7858 8 6 2.2193 5.4048 -2.7863 9 1 2.0302 5.9314 -1.8509 10 6 3.6773 5.5037 -3.2651 11 6 3.2610 6.7846 -4.0109 12 1 3.7107 6.8813 -4.9991 13 7 3.3912 8.0012 -3.2053 14 6 3.5903 8.0489 -1.8677 15 6 3.6521 9.3612 -1.5423 16 7 3.4821 10.0433 -2.6804 17 7 3.3302 9.2086 -3.6473 18 6 1.8338 6.2127 -4.0368 19 6 1.9695 -0.7283 1.0816 20 6 2.7068 -1.8844 0.8608 21 6 2.9685 -2.3549 -0.5468 22 8 1.7783 -2.9350 -1.0842 23 14 4.3285 -3.6280 -0.5332 24 6 3.2047 -2.5994 1.9326 25 6 2.9607 -2.1713 3.2244 26 6 3.5011 -2.9568 4.3915 27 9 3.1280 -2.3326 5.5866 28 9 2.9806 -4.2550 4.3610 29 9 4.8967 -3.0119 4.3103 30 6 2.2220 -1.0236 3.4481 31 6 1.7262 -0.3009 2.3810 32 1 -0.3634 0.5138 -0.8901 33 1 -0.3634 -1.0277 0.0005 34 1 -0.3634 0.5138 0.8899 35 1 3.0796 1.3444 0.1083 36 1 1.5610 1.9274 0.8309 37 1 2.5241 3.8011 -0.8499 38 1 0.5855 4.0043 -2.8935 39 1 2.1035 3.4208 -3.6169 40 1 4.3905 5.6785 -2.4595 41 1 3.9756 4.6905 -3.9269 42 1 3.6834 7.2088 -1.1954 43 1 3.8046 9.7762 -0.5569 44 1 1.6273 5.5937 -4.9100 45 1 1.0599 6.9580 -3.8537 46 1 3.2699 -1.5077 -1.1629 47 1 1.4517 -3.6961 -0.5850 48 1 3.9430 -4.7739 0.3289 49 1 4.5966 -4.0996 -1.9157 50 1 3.7819 -3.4960 1.7615 51 1 2.0329 -0.6922 4.4584 52 1 1.1490 0.5950 2.5564 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:29:00 Heat of formation + Delta-G solvation = -29.001259 kcal Electronic energy + Delta-G solvation = -41298.804996 eV Core-core repulsion = 35468.460509 eV Total energy + Delta-G solvation = -5830.344488 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.167 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -51.20250 -48.72974 -48.66607 -44.29750 -41.69758 -40.82183 -40.01150 -37.83658 -37.58818 -35.72482 -33.87868 -33.00324 -32.11766 -31.97948 -30.33038 -28.35703 -27.52110 -26.98340 -26.95097 -25.38788 -24.71007 -23.55849 -23.26763 -22.52248 -22.07411 -21.46705 -20.65364 -19.64678 -19.52505 -19.41843 -18.44519 -18.13232 -17.82984 -17.69762 -17.27651 -16.99413 -16.89124 -16.62061 -16.23215 -16.14387 -16.01735 -15.61808 -15.57329 -15.54849 -15.46226 -15.24030 -15.11012 -15.10313 -15.00612 -14.82817 -14.82626 -14.59460 -14.50674 -14.22546 -13.95205 -13.78395 -13.59271 -13.56256 -13.30075 -13.22544 -12.88234 -12.72979 -12.69587 -12.58272 -12.21150 -12.16222 -11.95913 -11.78765 -11.70581 -11.62963 -10.98616 -10.79617 -10.55735 -10.34349 -10.19899 -10.08690 -10.02696 -9.50768 -4.98411 -0.31203 0.03830 0.64760 1.26858 1.39760 1.52144 1.60398 1.62010 1.69785 1.92582 2.00692 2.20842 2.65065 2.80032 2.94918 3.06457 3.25744 3.35454 3.44828 3.49727 3.62945 3.64663 3.69402 3.72016 3.81948 4.07421 4.08886 4.12235 4.16677 4.18656 4.25277 4.30894 4.33821 4.37625 4.45664 4.47501 4.50659 4.58317 4.63226 4.67897 4.69117 4.77617 4.80707 4.91918 4.93605 4.98032 5.01081 5.05862 5.18788 5.21621 5.27915 5.43629 5.51750 5.70313 5.73845 6.20374 6.55170 6.63177 7.35568 7.53006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.500 5.500 3 C 0.037 3.963 4 C 0.511 3.489 5 O -0.565 6.565 6 N -0.716 5.716 7 C 0.136 3.864 8 C -0.113 4.113 9 H 0.113 0.887 10 C -0.118 4.118 11 C 0.095 3.905 12 H 0.125 0.875 13 N -0.268 5.268 14 C -0.032 4.032 15 C -0.069 4.069 16 N -0.320 5.320 17 N -0.132 5.132 18 C -0.131 4.131 19 C 0.145 3.855 20 C -0.097 4.097 21 C -0.054 4.054 22 O -0.534 6.534 23 Si 0.746 3.254 24 C -0.069 4.069 25 C -0.186 4.186 26 C 0.507 3.493 27 F -0.177 7.177 28 F -0.185 7.185 29 F -0.177 7.177 30 C -0.052 4.052 31 C -0.142 4.142 32 H 0.074 0.926 33 H 0.060 0.940 34 H 0.045 0.955 35 H 0.130 0.870 36 H 0.098 0.902 37 H 0.418 0.582 38 H 0.055 0.945 39 H 0.067 0.933 40 H 0.103 0.897 41 H 0.126 0.874 42 H 0.235 0.765 43 H 0.213 0.787 44 H 0.123 0.877 45 H 0.065 0.935 46 H 0.121 0.879 47 H 0.379 0.621 48 H -0.279 1.279 49 H -0.301 1.301 50 H 0.142 0.858 51 H 0.156 0.844 52 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.710 0.117 5.361 6.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 N -0.221 5.221 3 C -0.092 4.092 4 C 0.298 3.702 5 O -0.443 6.443 6 N -0.370 5.370 7 C 0.012 3.988 8 C -0.131 4.131 9 H 0.131 0.869 10 C -0.156 4.156 11 C -0.007 4.007 12 H 0.143 0.857 13 N -0.062 5.062 14 C -0.183 4.183 15 C -0.227 4.227 16 N -0.184 5.184 17 N -0.110 5.110 18 C -0.170 4.170 19 C 0.050 3.950 20 C -0.098 4.098 21 C -0.164 4.164 22 O -0.341 6.341 23 Si 0.652 3.348 24 C -0.088 4.088 25 C -0.187 4.187 26 C 0.453 3.547 27 F -0.158 7.158 28 F -0.167 7.167 29 F -0.159 7.159 30 C -0.071 4.071 31 C -0.161 4.161 32 H 0.093 0.907 33 H 0.079 0.921 34 H 0.063 0.937 35 H 0.148 0.852 36 H 0.116 0.884 37 H 0.255 0.745 38 H 0.073 0.927 39 H 0.086 0.914 40 H 0.121 0.879 41 H 0.144 0.856 42 H 0.251 0.749 43 H 0.230 0.770 44 H 0.141 0.859 45 H 0.084 0.916 46 H 0.139 0.861 47 H 0.228 0.772 48 H -0.206 1.206 49 H -0.229 1.229 50 H 0.160 0.840 51 H 0.174 0.826 52 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.530 0.027 2.421 3.502 hybrid contribution -1.135 -0.757 1.863 2.309 sum 1.394 -0.730 4.284 4.564 Atomic orbital electron populations 1.22460 0.84589 1.02467 1.01735 1.59083 1.09443 1.13134 1.40444 1.22210 1.03885 0.87988 0.95162 1.20781 0.78716 0.81762 0.88956 1.90740 1.40698 1.65018 1.47837 1.45781 1.57856 1.13082 1.20284 1.21215 0.99766 0.91409 0.86389 1.22880 0.96112 0.94583 0.99554 0.86910 1.23553 0.96897 0.93996 1.01125 1.22884 1.01023 0.80491 0.96254 0.85747 1.47460 1.44134 1.06984 1.07593 1.24265 1.07088 1.01411 0.85584 1.24268 1.07112 0.91491 0.99804 1.75102 1.17440 1.27071 0.98832 1.78314 1.21957 0.87666 1.23078 1.23362 0.94219 0.99137 1.00303 1.18838 0.94100 0.93029 0.88986 1.20107 0.98922 0.95352 0.95412 1.24889 0.94276 1.04955 0.92275 1.86699 1.42031 1.49527 1.55877 0.94574 0.83485 0.78643 0.78085 1.20870 0.97716 0.99461 0.90722 1.19913 1.06844 0.99781 0.92210 1.18416 0.75772 0.77658 0.82873 1.93174 1.91226 1.82195 1.49251 1.93221 1.86667 1.40141 1.96642 1.93232 1.29960 1.96335 1.96336 1.21139 0.92931 0.91588 1.01395 1.21911 1.00907 1.01772 0.91546 0.90698 0.92122 0.93686 0.85183 0.88428 0.74496 0.92689 0.91422 0.87868 0.85594 0.74892 0.77007 0.85889 0.91624 0.86095 0.77237 1.20613 1.22925 0.84025 0.82622 0.82448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 8.94 127.69 1.14 1.11 16 2 N -0.50 1.42 3.71 -724.42 -2.69 -1.27 16 3 C 0.04 -0.33 5.03 85.56 0.43 0.10 16 4 C 0.51 -2.12 7.56 87.66 0.66 -1.45 16 5 O -0.56 -3.80 14.31 -3.02 -0.04 -3.85 16 6 N -0.72 8.00 5.56 -463.05 -2.57 5.43 16 7 C 0.14 -1.29 5.50 86.38 0.48 -0.82 16 8 C -0.11 1.54 3.33 -10.27 -0.03 1.50 16 9 H 0.11 -1.74 6.97 -2.39 -0.02 -1.75 16 10 C -0.12 1.75 6.89 31.18 0.21 1.97 16 11 C 0.10 -0.77 5.11 45.57 0.23 -0.54 16 12 H 0.12 -0.97 8.14 -2.39 -0.02 -0.99 16 13 N -0.27 0.34 3.52 -324.40 -1.14 -0.80 16 14 C -0.03 0.19 9.69 83.49 0.81 1.00 16 15 C -0.07 -0.01 12.05 83.73 1.01 1.00 16 16 N -0.32 -3.20 12.41 -58.26 -0.72 -3.93 16 17 N -0.13 -1.15 13.17 37.02 0.49 -0.66 16 18 C -0.13 1.24 7.44 31.12 0.23 1.47 16 19 C 0.14 -0.62 4.65 38.21 0.18 -0.44 16 20 C -0.10 0.28 5.28 -19.73 -0.10 0.17 16 21 C -0.05 0.05 2.34 71.24 0.17 0.22 16 22 O -0.53 -1.72 12.88 -148.98 -1.92 -3.63 16 23 Si 0.75 -1.37 30.24 68.60 2.07 0.71 16 24 C -0.07 0.20 8.20 22.25 0.18 0.38 16 25 C -0.19 0.51 5.37 -19.84 -0.11 0.40 16 26 C 0.51 0.04 3.31 71.24 0.24 0.27 16 27 F -0.18 -0.05 15.96 44.97 0.72 0.66 16 28 F -0.19 -0.56 17.24 44.97 0.78 0.22 16 29 F -0.18 -0.20 17.23 44.97 0.78 0.57 16 30 C -0.05 0.32 9.42 22.25 0.21 0.53 16 31 C -0.14 1.09 8.70 22.40 0.19 1.28 16 32 H 0.07 0.30 5.88 -2.38 -0.01 0.29 16 33 H 0.06 0.11 8.13 -2.38 -0.02 0.09 16 34 H 0.04 -0.23 7.47 -2.39 -0.02 -0.25 16 35 H 0.13 -1.71 8.06 -2.39 -0.02 -1.73 16 36 H 0.10 -1.40 7.48 -2.39 -0.02 -1.42 16 37 H 0.42 -7.65 8.47 -92.71 -0.79 -8.43 16 38 H 0.05 -0.28 8.14 -2.39 -0.02 -0.30 16 39 H 0.07 -0.49 7.87 -2.39 -0.02 -0.51 16 40 H 0.10 -1.81 7.00 -2.39 -0.02 -1.82 16 41 H 0.13 -2.03 7.92 -2.38 -0.02 -2.05 16 42 H 0.23 -3.94 6.73 -2.91 -0.02 -3.96 16 43 H 0.21 -1.37 8.06 -2.91 -0.02 -1.40 16 44 H 0.12 -1.39 8.10 -2.39 -0.02 -1.41 16 45 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 46 H 0.12 -0.03 7.78 -2.38 -0.02 -0.05 16 47 H 0.38 -0.96 8.70 -74.06 -0.64 -1.60 16 48 H -0.28 -0.42 6.69 99.48 0.67 0.24 16 49 H -0.30 -1.93 7.11 99.48 0.71 -1.22 16 50 H 0.14 -0.50 4.86 -2.91 -0.01 -0.51 16 51 H 0.16 -1.39 7.15 -2.91 -0.02 -1.41 16 52 H 0.16 -1.93 7.16 -2.91 -0.02 -1.95 16 Total: 0.00 -32.33 437.05 1.46 -30.87 By element: Atomic # 1 Polarization: -32.08 SS G_CDS: -0.41 Total: -32.49 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: 6.13 Total: 8.16 kcal Atomic # 7 Polarization: 5.41 SS G_CDS: -6.64 Total: -1.23 kcal Atomic # 8 Polarization: -5.52 SS G_CDS: -1.96 Total: -7.48 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 2.27 Total: 1.46 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: 2.07 Total: 0.71 kcal Total: -32.33 1.46 -30.87 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.870 kcal (2) G-P(sol) polarization free energy of solvation -32.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.458 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds