Wall clock time and date at job start Sun Mar 7 2021 13:29:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35968 * 116.99526 * 2 1 4 4 C 1.39447 * 120.11980 * 180.02562 * 3 2 1 5 5 O 1.34784 * 133.24414 * 359.97438 * 4 3 2 6 6 C 1.34921 * 110.84504 * 180.02562 * 5 4 3 7 7 C 1.46990 * 125.14138 * 180.02562 * 6 5 4 8 8 O 1.21656 * 120.00096 * 179.97438 * 7 6 5 9 9 N 1.34777 * 120.00095 * 359.97438 * 7 6 5 10 10 C 1.46499 * 120.00329 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.47258 * 180.02562 * 10 9 7 12 12 H 1.09003 * 112.84383 * 316.19621 * 11 10 9 13 13 C 1.53780 * 113.61581 * 87.50562 * 11 10 9 14 14 C 1.53779 * 87.08127 * 139.97778 * 13 11 10 15 15 H 1.08990 * 113.61581 * 220.01761 * 14 13 11 16 16 N 1.46502 * 113.68504 * 89.12726 * 14 13 11 17 17 C 1.35315 * 125.87202 * 347.46253 * 16 14 13 18 18 C 1.35348 * 106.17556 * 179.97438 * 17 16 14 19 19 N 1.33767 * 106.49918 * 0.02562 * 18 17 16 20 20 N 1.28641 * 108.88459 * 359.73332 * 19 18 17 21 21 C 1.53774 * 113.61136 * 185.00250 * 11 10 9 22 22 C 1.35812 * 109.72061 * 0.02562 * 6 5 4 23 23 C 1.40608 * 119.14151 * 179.97438 * 4 3 2 24 24 C 1.39784 * 120.11380 * 359.97438 * 23 4 3 25 25 C 1.50700 * 120.08995 * 179.97438 * 24 23 4 26 26 O 1.42903 * 109.46837 * 75.00366 * 25 24 23 27 27 Si 1.86300 * 109.46849 * 194.99912 * 25 24 23 28 28 C 1.36629 * 119.81342 * 0.25522 * 24 23 4 29 29 C 1.38261 * 120.12343 * 359.97438 * 3 2 1 30 30 H 1.09002 * 109.46890 * 299.99273 * 1 2 3 31 31 H 1.09000 * 109.47609 * 59.99755 * 1 2 3 32 32 H 1.09001 * 109.46633 * 180.02562 * 1 2 3 33 33 H 0.97005 * 119.99898 * 0.02562 * 9 7 6 34 34 H 1.09005 * 109.47135 * 300.00666 * 10 9 7 35 35 H 1.08997 * 109.46575 * 60.00322 * 10 9 7 36 36 H 1.08996 * 113.61202 * 254.53474 * 13 11 10 37 37 H 1.09004 * 113.61196 * 25.42949 * 13 11 10 38 38 H 1.08000 * 126.91220 * 0.02562 * 17 16 14 39 39 H 1.08003 * 126.74982 * 180.02562 * 18 17 16 40 40 H 1.09003 * 113.61942 * 334.56733 * 21 11 10 41 41 H 1.09000 * 113.61609 * 105.38811 * 21 11 10 42 42 H 1.07997 * 126.96020 * 180.02562 * 22 6 5 43 43 H 1.08997 * 109.47760 * 315.00180 * 25 24 23 44 44 H 0.96700 * 114.00022 * 60.00263 * 26 25 24 45 45 H 1.48506 * 110.00048 * 58.68772 * 27 25 24 46 46 H 1.48502 * 109.99996 * 180.02562 * 27 25 24 47 47 H 1.07998 * 119.75064 * 179.72064 * 28 24 23 48 48 H 1.07997 * 119.66028 * 0.02562 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2875 -0.0005 5 8 4.4141 0.3575 -0.0007 6 6 5.6317 0.9389 -0.0007 7 6 6.9131 0.2187 -0.0014 8 8 7.9595 0.8392 -0.0018 9 7 6.9287 -1.1289 -0.0015 10 6 8.2059 -1.8467 -0.0028 11 6 7.9437 -3.3541 -0.0033 12 1 7.1574 -3.6471 0.6924 13 6 7.7768 -3.9499 -1.4111 14 6 8.5933 -5.1540 -0.9129 15 1 9.3043 -5.5331 -1.6468 16 7 7.7760 -6.2117 -0.3134 17 6 6.4736 -6.1045 0.0378 18 6 6.1203 -7.3075 0.5477 19 7 7.2096 -8.0814 0.4849 20 7 8.1720 -7.4044 -0.0349 21 6 9.2212 -4.2014 0.1183 22 6 5.4944 2.2900 0.0000 23 6 4.0553 2.5511 -0.0011 24 6 3.2763 3.7118 -0.0016 25 6 3.9379 5.0658 -0.0016 26 8 4.4608 5.3404 -1.3029 27 14 2.6859 6.3686 0.4522 28 6 1.9135 3.6152 0.0037 29 6 1.2956 2.3726 -0.0005 30 1 -0.3633 0.5137 0.8901 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3632 -1.0277 0.0005 33 1 6.0943 -1.6237 -0.0015 34 1 8.7736 -1.5766 -0.8932 35 1 8.7750 -1.5769 0.8867 36 1 6.7448 -4.1955 -1.6617 37 1 8.2773 -3.3753 -2.1906 38 1 5.8426 -5.2344 -0.0683 39 1 5.1498 -7.5875 0.9300 40 1 10.1167 -3.6958 -0.2430 41 1 9.3561 -4.6492 1.1028 42 1 6.2872 3.0233 -0.0003 43 1 4.7500 5.0735 0.7253 44 1 3.7922 5.3495 -2.0015 45 1 2.1114 6.0767 1.7902 46 1 3.3257 7.7087 0.4552 47 1 1.3126 4.5125 0.0078 48 1 0.2173 2.3120 -0.0005 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946166_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:29:09 Heat of formation + Delta-G solvation = 73.874082 kcal Electronic energy + Delta-G solvation = -34689.824549 eV Core-core repulsion = 29910.525101 eV Total energy + Delta-G solvation = -4779.299448 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.152 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -44.31816 -43.73160 -41.22081 -40.72670 -40.06797 -39.13871 -37.05977 -36.08391 -33.96620 -33.62822 -32.03388 -31.98635 -31.22512 -29.64176 -28.60407 -27.33009 -26.42970 -25.78979 -24.35613 -24.00993 -23.56769 -22.72903 -22.05933 -21.72909 -20.99654 -19.81884 -19.04690 -18.71346 -18.29213 -17.89443 -17.76648 -17.49178 -17.21966 -16.99645 -16.80338 -16.47351 -16.24907 -16.23567 -15.93011 -15.81452 -15.63420 -15.16177 -14.99254 -14.73788 -14.67335 -14.43263 -14.14375 -14.05866 -13.93699 -13.64507 -13.53424 -13.44061 -13.38160 -12.72173 -12.61705 -12.47273 -12.43220 -12.18511 -12.13653 -12.03652 -11.94729 -11.79733 -11.48192 -11.01451 -11.00731 -10.50835 -10.40783 -10.34910 -9.83688 -9.05166 -5.12342 -0.65720 0.05561 0.59348 0.64220 1.16790 1.21804 1.23375 1.57773 1.65922 1.82100 1.91767 1.97819 1.98346 2.34640 2.72826 2.90074 3.10185 3.21494 3.28064 3.37230 3.47428 3.51483 3.57070 3.76771 3.79442 3.80753 3.89045 3.94986 4.02446 4.03778 4.07329 4.11717 4.13610 4.21514 4.25467 4.33381 4.38784 4.40029 4.40456 4.43954 4.49557 4.57419 4.75181 4.76861 4.81206 4.82078 5.00137 5.05751 5.16810 5.20059 5.25613 5.55179 5.59918 6.06853 6.21391 6.51599 6.82056 7.56807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.026 4.026 7 C 0.602 3.398 8 O -0.508 6.508 9 N -0.718 5.718 10 C 0.129 3.871 11 C -0.131 4.131 12 H 0.104 0.896 13 C -0.136 4.136 14 C 0.111 3.889 15 H 0.128 0.872 16 N -0.274 5.274 17 C -0.052 4.052 18 C -0.049 4.049 19 N -0.270 5.270 20 N -0.081 5.081 21 C -0.129 4.129 22 C -0.103 4.103 23 C -0.083 4.083 24 C -0.098 4.098 25 C -0.066 4.066 26 O -0.535 6.535 27 Si 0.686 3.314 28 C -0.087 4.087 29 C -0.177 4.177 30 H 0.061 0.939 31 H 0.061 0.939 32 H 0.105 0.895 33 H 0.408 0.592 34 H 0.081 0.919 35 H 0.079 0.921 36 H 0.086 0.914 37 H 0.117 0.883 38 H 0.188 0.812 39 H 0.191 0.809 40 H 0.115 0.885 41 H 0.085 0.915 42 H 0.174 0.826 43 H 0.114 0.886 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.252 1.252 47 H 0.141 0.859 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.548 3.524 -2.600 8.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.076 4.076 7 C 0.388 3.612 8 O -0.384 6.384 9 N -0.369 5.369 10 C 0.006 3.994 11 C -0.150 4.150 12 H 0.122 0.878 13 C -0.174 4.174 14 C 0.009 3.991 15 H 0.145 0.855 16 N -0.068 5.068 17 C -0.203 4.203 18 C -0.206 4.206 19 N -0.136 5.136 20 N -0.061 5.061 21 C -0.168 4.168 22 C -0.123 4.123 23 C -0.084 4.084 24 C -0.099 4.099 25 C -0.177 4.177 26 O -0.341 6.341 27 Si 0.587 3.413 28 C -0.105 4.105 29 C -0.196 4.196 30 H 0.079 0.921 31 H 0.080 0.920 32 H 0.124 0.876 33 H 0.244 0.756 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.105 0.895 37 H 0.135 0.865 38 H 0.205 0.795 39 H 0.208 0.792 40 H 0.133 0.867 41 H 0.104 0.896 42 H 0.192 0.808 43 H 0.131 0.869 44 H 0.226 0.774 45 H -0.179 1.179 46 H -0.177 1.177 47 H 0.158 0.842 48 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -5.191 3.121 -1.717 6.295 hybrid contribution -1.233 0.320 0.220 1.293 sum -6.424 3.441 -1.497 7.440 Atomic orbital electron populations 1.23199 0.77244 1.04801 1.01840 1.86169 1.22213 1.25652 1.88388 1.17729 0.86467 0.85911 0.99492 1.18775 0.87448 0.86939 1.07048 1.84036 1.12638 1.34728 1.76208 1.21925 0.83881 0.92582 1.09198 1.16595 0.85462 0.82043 0.77133 1.90938 1.30349 1.67443 1.49678 1.45856 1.10530 1.05752 1.74765 1.21457 0.85117 0.89175 1.03630 1.23019 0.99813 0.94172 0.97967 0.87826 1.23552 1.01870 0.94316 0.97699 1.22502 0.94175 0.85277 0.97169 0.85452 1.47180 1.08842 1.10487 1.40257 1.23602 0.86971 1.02758 1.06957 1.23682 1.00297 0.91048 1.05596 1.75181 0.97867 1.25779 1.14742 1.78384 1.22119 0.89787 1.15771 1.23342 0.97866 0.95338 1.00251 1.22761 0.94812 0.94355 1.00401 1.19407 0.92621 0.92100 1.04250 1.19499 0.92924 0.94473 1.03006 1.25063 1.05486 0.97766 0.89352 1.86544 1.38148 1.93363 1.16010 0.94994 0.83012 0.77845 0.85474 1.20400 0.93095 0.97296 0.99705 1.20989 1.00464 0.90516 1.07641 0.92089 0.92000 0.87620 0.75641 0.90116 0.90235 0.89509 0.86524 0.79482 0.79215 0.86655 0.89593 0.80845 0.86869 0.77402 1.17934 1.17655 0.84165 0.83332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 101.05 0.99 0.90 16 2 O -0.31 -0.11 10.50 -19.64 -0.21 -0.32 16 3 C 0.15 0.10 6.70 -39.12 -0.26 -0.16 16 4 C 0.05 0.10 7.35 -38.24 -0.28 -0.18 16 5 O -0.17 -0.37 10.28 2.65 0.03 -0.35 16 6 C -0.03 -0.05 7.07 -36.91 -0.26 -0.31 16 7 C 0.60 1.10 7.80 -12.71 -0.10 1.00 16 8 O -0.51 -2.48 16.83 5.23 0.09 -2.39 16 9 N -0.72 1.12 5.55 -61.52 -0.34 0.78 16 10 C 0.13 -0.38 5.51 -4.04 -0.02 -0.40 16 11 C -0.13 0.60 3.34 -89.81 -0.30 0.30 16 12 H 0.10 -0.47 6.99 -51.93 -0.36 -0.84 16 13 C -0.14 0.69 6.88 -25.92 -0.18 0.51 16 14 C 0.11 -0.33 5.10 -67.12 -0.34 -0.67 16 15 H 0.13 -0.45 8.14 -51.93 -0.42 -0.87 16 16 N -0.27 -0.10 3.52 -53.98 -0.19 -0.29 16 17 C -0.05 0.05 9.69 -17.05 -0.17 -0.11 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 19 N -0.27 -1.35 12.41 30.23 0.38 -0.98 16 20 N -0.08 -0.35 13.17 60.35 0.79 0.44 16 21 C -0.13 0.51 7.44 -25.92 -0.19 0.32 16 22 C -0.10 -0.24 10.68 -37.23 -0.40 -0.63 16 23 C -0.08 -0.16 6.16 -105.21 -0.65 -0.80 16 24 C -0.10 0.00 5.27 -104.63 -0.55 -0.55 16 25 C -0.07 0.03 2.71 36.01 0.10 0.13 16 26 O -0.54 0.03 12.88 -35.23 -0.45 -0.42 16 27 Si 0.69 -1.28 29.92 -169.99 -5.09 -6.37 16 28 C -0.09 0.16 8.62 -39.97 -0.34 -0.18 16 29 C -0.18 0.30 9.03 -39.38 -0.36 -0.06 16 30 H 0.06 -0.29 7.66 -51.93 -0.40 -0.68 16 31 H 0.06 -0.30 7.66 -51.93 -0.40 -0.70 16 32 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 33 H 0.41 -1.32 8.19 -40.82 -0.33 -1.65 16 34 H 0.08 -0.23 7.84 -51.93 -0.41 -0.64 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.09 -0.45 6.99 -51.93 -0.36 -0.81 16 37 H 0.12 -0.69 7.90 -51.93 -0.41 -1.10 16 38 H 0.19 -0.88 6.75 -52.49 -0.35 -1.24 16 39 H 0.19 -0.35 8.06 -52.48 -0.42 -0.78 16 40 H 0.12 -0.62 8.10 -51.93 -0.42 -1.04 16 41 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.17 0.32 8.06 -52.49 -0.42 -0.10 16 43 H 0.11 0.03 7.96 -51.93 -0.41 -0.39 16 44 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 45 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 46 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 47 H 0.14 -0.67 5.07 -52.49 -0.27 -0.94 16 48 H 0.15 -0.67 6.26 -52.49 -0.33 -1.00 16 LS Contribution 405.21 15.07 6.11 6.11 Total: 0.00 -12.54 405.21 -8.21 -20.75 By element: Atomic # 1 Polarization: -10.01 SS G_CDS: -5.79 Total: -15.81 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -3.53 Total: -1.18 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: 0.64 Total: -0.04 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.54 Total: -3.47 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.09 Total: -6.37 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -12.54 -8.21 -20.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.623 kcal (2) G-P(sol) polarization free energy of solvation -12.543 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.749 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds