Wall clock time and date at job start Sun Mar 7 2021 13:29:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35652 * 117.00017 * 2 1 4 4 C 1.38406 * 120.12365 * 0.02562 * 3 2 1 5 5 C 1.38721 * 120.03392 * 180.02562 * 4 3 2 6 6 O 1.35718 * 119.86219 * 180.02562 * 5 4 3 7 7 C 1.42901 * 117.00128 * 359.97069 * 6 5 4 8 8 C 1.39144 * 120.27577 * 359.97438 * 5 4 3 9 9 C 1.50699 * 119.88109 * 179.97438 * 8 5 4 10 10 O 1.42905 * 109.46972 * 285.00408 * 9 8 5 11 11 Si 1.86301 * 109.47146 * 165.00317 * 9 8 5 12 12 C 1.37585 * 120.23997 * 0.26036 * 8 5 4 13 13 C 1.39825 * 119.95906 * 359.49280 * 12 8 5 14 14 C 1.47298 * 120.13173 * 180.25658 * 13 12 8 15 15 O 1.21617 * 120.00263 * 180.25206 * 14 13 12 16 16 N 1.34784 * 120.00053 * 0.24568 * 14 13 12 17 17 C 1.46498 * 119.99713 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.46912 * 180.02562 * 17 16 14 19 19 H 1.09007 * 112.85347 * 316.19382 * 18 17 16 20 20 C 1.53783 * 113.61713 * 87.50118 * 18 17 16 21 21 C 1.53783 * 87.08337 * 139.98281 * 20 18 17 22 22 H 1.08993 * 113.69118 * 220.00962 * 21 20 18 23 23 N 1.46505 * 113.61411 * 89.11565 * 21 20 18 24 24 C 1.36877 * 126.39521 * 142.50122 * 23 21 20 25 25 C 1.34664 * 106.81979 * 180.02562 * 24 23 21 26 26 N 1.34131 * 108.01580 * 0.02562 * 25 24 23 27 27 C 1.30497 * 109.25809 * 359.72358 * 26 25 24 28 28 C 1.53782 * 87.08111 * 334.56865 * 21 20 18 29 29 H 1.09003 * 109.47019 * 299.99486 * 1 2 3 30 30 H 1.08996 * 109.47582 * 59.99889 * 1 2 3 31 31 H 1.08998 * 109.47542 * 180.02562 * 1 2 3 32 32 H 1.08003 * 119.97808 * 0.04544 * 4 3 2 33 33 H 1.09000 * 109.47224 * 300.00916 * 7 6 5 34 34 H 1.09001 * 109.46856 * 60.00462 * 7 6 5 35 35 H 1.08994 * 109.47164 * 180.02562 * 7 6 5 36 36 H 1.09001 * 109.47358 * 44.99770 * 9 8 5 37 37 H 0.96696 * 114.00036 * 179.97438 * 10 9 8 38 38 H 1.48497 * 109.99842 * 59.99749 * 11 9 8 39 39 H 1.48498 * 109.99736 * 181.31738 * 11 9 8 40 40 H 1.07994 * 120.02051 * 179.74325 * 12 8 5 41 41 H 0.96993 * 119.99661 * 359.97438 * 16 14 13 42 42 H 1.09000 * 109.47348 * 299.99865 * 17 16 14 43 43 H 1.09005 * 109.47479 * 60.00204 * 17 16 14 44 44 H 1.09006 * 113.61268 * 254.52807 * 20 18 17 45 45 H 1.08995 * 113.61248 * 25.42973 * 20 18 17 46 46 H 1.08001 * 126.59248 * 359.97015 * 24 23 21 47 47 H 1.07999 * 125.99188 * 180.02562 * 25 24 23 48 48 H 1.07999 * 125.64852 * 180.28970 * 27 26 25 49 49 H 1.08998 * 113.61593 * 270.88694 * 28 21 20 50 50 H 1.08998 * 113.68982 * 139.99168 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 1.2935 2.3711 0.0005 5 6 1.9253 3.6061 0.0000 6 8 1.1851 4.7437 0.0011 7 6 -0.2359 4.5932 0.0020 8 6 3.3146 3.6834 -0.0005 9 6 3.9916 5.0298 -0.0017 10 8 3.8935 5.6111 -1.3035 11 14 5.7865 4.8227 0.4523 12 6 4.0725 2.5351 -0.0060 13 6 3.4461 1.2850 -0.0002 14 6 4.2538 0.0533 -0.0003 15 8 3.7066 -1.0328 0.0001 16 7 5.5995 0.1298 -0.0008 17 6 6.4027 -1.0953 -0.0015 18 6 7.8887 -0.7309 -0.0014 19 1 8.1271 0.0744 -0.6964 20 6 8.4725 -0.5251 1.4063 21 6 9.7294 -1.2568 0.9065 22 1 10.1578 -1.9412 1.6386 23 7 10.7272 -0.3670 0.3074 24 6 12.0867 -0.4771 0.4221 25 6 12.6206 0.5410 -0.2793 26 7 11.6145 1.2536 -0.8074 27 6 10.4775 0.7124 -0.4647 28 6 8.8214 -1.9473 -0.1248 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3634 -1.0276 0.0005 32 1 0.2149 2.3165 0.0017 33 1 -0.5438 4.0442 -0.8879 34 1 -0.5424 4.0436 0.8921 35 1 -0.7055 5.5768 0.0024 36 1 3.5058 5.6814 0.7246 37 1 4.3085 6.4813 -1.3779 38 1 6.4600 3.9363 -0.5305 39 1 6.4579 6.1468 0.4857 40 1 5.1505 2.5993 -0.0105 41 1 6.0359 0.9960 -0.0016 42 1 6.1727 -1.6811 0.8885 43 1 6.1719 -1.6808 -0.8915 44 1 8.6473 0.5211 1.6578 45 1 7.9340 -1.0645 2.1854 46 1 12.6273 -1.2343 0.9705 47 1 13.6743 0.7474 -0.3961 48 1 9.4990 1.0699 -0.7496 49 1 8.3783 -2.8756 0.2357 50 1 9.2768 -2.0502 -1.1098 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:29:56 Heat of formation + Delta-G solvation = 0.581238 kcal Electronic energy + Delta-G solvation = -34503.396008 eV Core-core repulsion = 29887.258917 eV Total energy + Delta-G solvation = -4616.137092 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.22149 -42.01314 -40.68520 -40.09711 -39.50959 -38.37068 -37.09293 -35.59408 -33.32865 -32.33209 -31.85502 -30.25844 -29.14610 -29.03439 -28.05481 -27.09344 -26.05942 -25.13303 -24.11090 -22.61778 -22.41334 -21.73489 -21.38185 -20.84198 -19.97896 -18.61308 -18.52127 -18.22942 -17.87242 -17.29616 -17.08279 -16.72357 -16.59372 -16.50233 -16.37881 -16.07201 -16.00530 -15.76332 -15.54840 -15.46805 -15.14877 -14.80137 -14.66054 -14.36170 -14.27125 -14.10283 -13.84575 -13.75346 -13.70471 -13.58556 -13.47155 -13.11968 -12.90131 -12.61043 -12.53244 -12.20114 -12.14662 -11.90964 -11.88966 -11.75429 -11.60899 -10.84500 -10.71110 -10.50380 -10.42924 -10.03625 -9.87451 -9.42318 -9.10481 -5.04991 -0.16433 0.14623 1.10495 1.22015 1.49785 1.71436 1.83770 1.89821 2.06537 2.13867 2.17159 2.31184 2.70644 3.02817 3.17126 3.31726 3.38844 3.45850 3.52176 3.65870 3.68013 3.78220 3.86785 3.88702 3.97484 4.05454 4.06047 4.09628 4.13042 4.14730 4.16823 4.23875 4.34090 4.39945 4.42245 4.44484 4.52474 4.54152 4.57247 4.62484 4.69226 4.79096 4.82070 4.84080 4.95771 5.04283 5.08362 5.32446 5.34989 5.46410 5.84879 6.01648 6.25573 6.29900 6.49186 6.54953 7.19352 7.37482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.297 6.297 7 C 0.022 3.978 8 C -0.149 4.149 9 C -0.059 4.059 10 O -0.532 6.532 11 Si 0.675 3.325 12 C -0.007 4.007 13 C -0.210 4.210 14 C 0.567 3.433 15 O -0.518 6.518 16 N -0.734 5.734 17 C 0.134 3.866 18 C -0.133 4.133 19 H 0.100 0.900 20 C -0.139 4.139 21 C 0.104 3.896 22 H 0.115 0.885 23 N -0.442 5.442 24 C -0.052 4.052 25 C -0.030 4.030 26 N -0.493 5.493 27 C 0.177 3.823 28 C -0.134 4.134 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.059 0.941 34 H 0.060 0.940 35 H 0.106 0.894 36 H 0.077 0.923 37 H 0.378 0.622 38 H -0.251 1.251 39 H -0.256 1.256 40 H 0.140 0.860 41 H 0.396 0.604 42 H 0.075 0.925 43 H 0.073 0.927 44 H 0.083 0.917 45 H 0.109 0.891 46 H 0.175 0.825 47 H 0.170 0.830 48 H 0.200 0.800 49 H 0.108 0.892 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.735 0.103 4.831 5.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.333 4.333 5 C 0.175 3.825 6 O -0.209 6.209 7 C -0.073 4.073 8 C -0.150 4.150 9 C -0.168 4.168 10 O -0.339 6.339 11 Si 0.576 3.424 12 C -0.026 4.026 13 C -0.214 4.214 14 C 0.355 3.645 15 O -0.394 6.394 16 N -0.387 5.387 17 C 0.010 3.990 18 C -0.152 4.152 19 H 0.118 0.882 20 C -0.177 4.177 21 C 0.000 4.000 22 H 0.133 0.867 23 N -0.125 5.125 24 C -0.185 4.185 25 C -0.178 4.178 26 N -0.211 5.211 27 C -0.105 4.105 28 C -0.173 4.173 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.125 0.875 32 H 0.163 0.837 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.124 0.876 36 H 0.095 0.905 37 H 0.226 0.774 38 H -0.176 1.176 39 H -0.181 1.181 40 H 0.157 0.843 41 H 0.231 0.769 42 H 0.093 0.907 43 H 0.091 0.909 44 H 0.101 0.899 45 H 0.127 0.873 46 H 0.192 0.808 47 H 0.187 0.813 48 H 0.217 0.783 49 H 0.126 0.874 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.498 -0.541 4.044 4.784 hybrid contribution -0.668 0.720 -0.354 1.044 sum -3.166 0.179 3.689 4.865 Atomic orbital electron populations 1.23240 0.78248 1.04828 1.01351 1.86395 1.21166 1.25036 1.85813 1.18707 0.90613 0.84392 0.87798 1.21274 1.01112 0.91430 1.19525 1.18699 0.90376 0.84712 0.88706 1.86131 1.19462 1.28609 1.86662 1.23211 0.77822 1.04609 1.01687 1.18311 0.90103 0.94187 1.12443 1.24532 1.10580 0.93622 0.88105 1.86619 1.80103 1.37476 1.29720 0.95410 0.74488 0.83434 0.89072 1.20825 0.99273 0.89966 0.92488 1.18999 0.90645 0.93460 1.18279 1.17771 0.81627 0.88577 0.76492 1.90851 1.71388 1.28665 1.48526 1.45866 1.06044 1.09653 1.77187 1.21310 0.87797 0.86823 1.03033 1.23076 0.94314 0.99682 0.98104 0.88199 1.23515 0.94508 1.02354 0.97294 1.22332 0.88421 0.92534 0.96737 0.86702 1.45287 1.06179 1.22709 1.38302 1.22770 0.82669 1.04702 1.08341 1.22366 0.99127 0.94929 1.01343 1.70346 0.97982 1.28822 1.23965 1.24995 0.99639 0.88481 0.97381 1.23363 0.95653 0.98037 1.00202 0.92351 0.92419 0.87486 0.83725 0.92240 0.92174 0.87555 0.90517 0.77418 1.17552 1.18099 0.84329 0.76882 0.90693 0.90902 0.89882 0.87291 0.80816 0.81258 0.78345 0.87392 0.89951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.27 -0.98 8.56 -40.58 -0.35 -1.32 16 3 C 0.23 0.68 6.70 -38.73 -0.26 0.42 16 4 C -0.31 -0.35 8.01 -39.34 -0.31 -0.67 16 5 C 0.22 0.40 6.67 -39.07 -0.26 0.14 16 6 O -0.30 -0.38 9.80 -18.86 -0.18 -0.57 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.15 -0.22 5.30 -104.52 -0.55 -0.77 16 9 C -0.06 -0.01 2.36 36.01 0.08 0.07 16 10 O -0.53 -0.85 12.86 -35.23 -0.45 -1.30 16 11 Si 0.67 -0.99 30.20 -169.99 -5.13 -6.13 16 12 C -0.01 -0.01 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.54 5.89 -104.83 -0.62 -1.16 16 14 C 0.57 1.88 7.76 -12.57 -0.10 1.79 16 15 O -0.52 -3.62 15.15 -16.66 -0.25 -3.87 16 16 N -0.73 0.20 5.51 -61.42 -0.34 -0.14 16 17 C 0.13 -0.19 5.51 -4.04 -0.02 -0.21 16 18 C -0.13 0.46 3.25 -89.81 -0.29 0.17 16 19 H 0.10 -0.34 5.63 -51.92 -0.29 -0.63 16 20 C -0.14 0.56 7.06 -25.92 -0.18 0.38 16 21 C 0.10 -0.32 4.88 -67.11 -0.33 -0.65 16 22 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 23 N -0.44 0.13 2.94 -110.60 -0.33 -0.19 16 24 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 25 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 26 N -0.49 -2.17 11.25 -14.67 -0.17 -2.34 16 27 C 0.18 0.24 11.20 -90.38 -1.01 -0.77 16 28 C -0.13 0.47 7.35 -25.92 -0.19 0.28 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 31 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.15 -0.18 4.50 -52.48 -0.24 -0.42 16 33 H 0.06 -0.16 7.65 -51.93 -0.40 -0.56 16 34 H 0.06 -0.21 7.65 -51.93 -0.40 -0.60 16 35 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 36 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 37 H 0.38 -0.87 8.74 45.56 0.40 -0.47 16 38 H -0.25 -0.03 6.74 56.52 0.38 0.35 16 39 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 40 H 0.14 -0.22 3.20 -52.49 -0.17 -0.39 16 41 H 0.40 -0.97 6.49 -40.82 -0.26 -1.24 16 42 H 0.07 -0.09 7.84 -51.93 -0.41 -0.49 16 43 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.08 -0.30 8.03 -51.93 -0.42 -0.72 16 45 H 0.11 -0.52 7.89 -51.93 -0.41 -0.93 16 46 H 0.17 -0.42 8.06 -52.49 -0.42 -0.84 16 47 H 0.17 0.11 8.06 -52.49 -0.42 -0.31 16 48 H 0.20 -0.25 5.85 -52.49 -0.31 -0.56 16 49 H 0.11 -0.49 8.10 -51.93 -0.42 -0.91 16 50 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 404.75 15.07 6.10 6.10 Total: 0.00 -12.51 404.75 -10.58 -23.09 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -6.70 Total: -13.43 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -2.79 Total: 0.09 kcal Atomic # 7 Polarization: -1.84 SS G_CDS: -0.83 Total: -2.67 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.24 Total: -7.07 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.13 Total: -6.13 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -12.51 -10.58 -23.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.674 kcal (2) G-P(sol) polarization free energy of solvation -12.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.093 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds