Wall clock time and date at job start Sun Mar 7 2021 13:32:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.46787 * 2 1 4 4 C 1.50699 * 109.47437 * 240.00084 * 2 1 3 5 5 C 1.38268 * 119.94452 * 299.99923 * 4 2 1 6 6 C 1.38144 * 120.05763 * 179.97438 * 5 4 2 7 7 C 1.38738 * 119.94149 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05074 * 180.02562 * 7 6 5 9 9 C 1.42904 * 116.99731 * 179.97438 * 8 7 6 10 10 C 1.50697 * 109.47133 * 179.97438 * 9 8 7 11 11 O 1.21283 * 120.00048 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99892 * 179.97438 * 10 9 8 13 13 C 1.46502 * 119.99766 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.47120 * 180.02562 * 13 12 10 15 15 H 1.09000 * 112.90754 * 43.74528 * 14 13 12 16 16 C 1.53777 * 113.61477 * 174.99983 * 14 13 12 17 17 C 1.53787 * 87.07973 * 139.98091 * 16 14 13 18 18 H 1.09002 * 113.61310 * 219.93538 * 17 16 14 19 19 N 1.46503 * 113.61387 * 89.11692 * 17 16 14 20 20 C 1.36884 * 126.39494 * 121.24640 * 19 17 16 21 21 C 1.34669 * 106.81372 * 180.26001 * 20 19 17 22 22 N 1.34128 * 108.02336 * 359.97438 * 21 20 19 23 23 C 1.30498 * 109.25660 * 0.02562 * 22 21 20 24 24 C 1.53782 * 87.17407 * 334.52549 * 17 16 14 25 25 C 1.38726 * 119.88919 * 0.26972 * 7 6 5 26 26 C 1.38144 * 119.94719 * 359.47965 * 25 7 6 27 27 H 0.96698 * 114.00507 * 60.00453 * 1 2 3 28 28 H 1.08992 * 109.47613 * 119.99737 * 2 1 3 29 29 H 1.48495 * 110.00194 * 59.99991 * 3 2 1 30 30 H 1.48508 * 109.99988 * 181.32094 * 3 2 1 31 31 H 1.07994 * 119.97215 * 359.97438 * 5 4 2 32 32 H 1.07992 * 120.02873 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.46875 * 59.99512 * 9 8 7 34 34 H 1.09001 * 109.47211 * 299.99842 * 9 8 7 35 35 H 0.96994 * 119.99730 * 0.02562 * 12 10 9 36 36 H 1.08999 * 109.46649 * 60.00150 * 13 12 10 37 37 H 1.09001 * 109.47154 * 300.00194 * 13 12 10 38 38 H 1.08996 * 113.61210 * 25.43227 * 16 14 13 39 39 H 1.08998 * 113.61186 * 254.52485 * 16 14 13 40 40 H 1.07996 * 126.59325 * 0.22285 * 20 19 17 41 41 H 1.07998 * 125.98937 * 180.02562 * 21 20 19 42 42 H 1.08003 * 125.65471 * 180.02562 * 23 22 21 43 43 H 1.08990 * 113.61787 * 140.02389 * 24 17 16 44 44 H 1.09003 * 113.61250 * 270.92741 * 24 17 16 45 45 H 1.08006 * 120.02894 * 179.72479 * 25 7 6 46 46 H 1.07993 * 119.97599 * 180.27355 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5967 -2.0342 -1.4481 6 6 2.0555 -2.6875 -2.5755 7 6 2.8532 -2.0143 -3.4895 8 8 3.3054 -2.6547 -4.5996 9 6 4.1215 -1.8993 -5.4971 10 6 4.5260 -2.7679 -6.6602 11 8 4.1519 -3.9203 -6.7154 12 7 5.3027 -2.2639 -7.6396 13 6 5.6956 -3.1082 -8.7706 14 6 6.5694 -2.2995 -9.7314 15 1 7.3189 -1.6970 -9.2183 16 6 7.1373 -3.1297 -10.8946 17 6 6.8552 -1.9156 -11.7953 18 1 6.4648 -2.1820 -12.7776 19 7 7.9677 -0.9648 -11.8640 20 6 8.6330 -0.5735 -12.9945 21 6 9.5803 0.3012 -12.6058 22 7 9.4954 0.4406 -11.2745 23 6 8.5317 -0.3149 -10.8233 24 6 5.7652 -1.5165 -10.7866 25 6 3.1926 -0.6879 -3.2657 26 6 2.7270 -0.0375 -2.1394 27 1 -0.3934 0.4416 -0.7650 28 1 1.7923 -0.5137 0.8899 29 1 1.5613 2.4679 1.2084 30 1 3.5345 1.7704 -0.0322 31 1 0.9760 -2.5578 -0.7362 32 1 1.7942 -3.7215 -2.7449 33 1 5.0134 -1.5542 -4.9741 34 1 3.5597 -1.0399 -5.8631 35 1 5.6016 -1.3422 -7.5956 36 1 4.8035 -3.4534 -9.2932 37 1 6.2576 -3.9674 -8.4045 38 1 6.5360 -4.0050 -11.1406 39 1 8.1978 -3.3590 -10.7904 40 1 8.4364 -0.9032 -14.0039 41 1 10.2845 0.8032 -13.2528 42 1 8.2341 -0.4050 -9.7890 43 1 5.7186 -0.4446 -10.5953 44 1 4.7895 -1.9516 -11.0032 45 1 3.8172 -0.1630 -3.9734 46 1 2.9873 0.9963 -1.9669 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946168_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:32:37 Heat of formation + Delta-G solvation = 28.029161 kcal Electronic energy + Delta-G solvation = -28228.164387 eV Core-core repulsion = 24087.437338 eV Total energy + Delta-G solvation = -4140.727049 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.20273 -41.55569 -40.72720 -39.83206 -38.94120 -37.12049 -35.80894 -33.35693 -32.41594 -31.73612 -30.56188 -30.16486 -28.19760 -26.83550 -26.19519 -24.72685 -23.88165 -22.43260 -22.37986 -21.82653 -21.54921 -20.79215 -19.49174 -18.54081 -18.11129 -17.72077 -17.49084 -17.17025 -16.83445 -16.40892 -16.34069 -16.06602 -15.95037 -15.79407 -15.53556 -15.39362 -14.97252 -14.79926 -14.64883 -14.53455 -14.34086 -14.31520 -13.74755 -13.60878 -13.52900 -13.46124 -13.41684 -13.05651 -12.25431 -12.06927 -12.05380 -12.00449 -11.79657 -11.69069 -11.59060 -11.01667 -10.89536 -10.50723 -10.40450 -10.20596 -10.04440 -9.47082 -9.22365 -4.98640 0.27458 0.30775 1.10412 1.34682 1.44273 1.49158 1.64853 1.80967 1.99341 2.21104 2.59240 2.65924 3.23830 3.34580 3.55070 3.58178 3.61339 3.68536 3.72287 3.75583 3.83782 3.96053 3.98543 4.04761 4.09628 4.23934 4.25167 4.30970 4.42784 4.50386 4.50937 4.58706 4.66257 4.67433 4.72059 4.76579 4.81316 4.91570 4.95119 4.97195 5.15706 5.20821 5.25389 5.33863 5.38374 5.49980 5.69582 5.81683 6.25877 6.30206 6.45626 6.80150 7.11550 7.14109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.074 4.074 3 Si 0.782 3.218 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.166 4.166 7 C 0.121 3.879 8 O -0.320 6.320 9 C 0.035 3.965 10 C 0.512 3.488 11 O -0.575 6.575 12 N -0.708 5.708 13 C 0.133 3.867 14 C -0.120 4.120 15 H 0.109 0.891 16 C -0.132 4.132 17 C 0.098 3.902 18 H 0.129 0.871 19 N -0.439 5.439 20 C -0.048 4.048 21 C -0.064 4.064 22 N -0.541 5.541 23 C 0.173 3.827 24 C -0.129 4.129 25 C -0.199 4.199 26 C -0.076 4.076 27 H 0.395 0.605 28 H 0.102 0.898 29 H -0.304 1.304 30 H -0.281 1.281 31 H 0.132 0.868 32 H 0.126 0.874 33 H 0.124 0.876 34 H 0.129 0.871 35 H 0.421 0.579 36 H 0.070 0.930 37 H 0.059 0.941 38 H 0.118 0.882 39 H 0.070 0.930 40 H 0.200 0.800 41 H 0.174 0.826 42 H 0.225 0.775 43 H 0.083 0.917 44 H 0.117 0.883 45 H 0.166 0.834 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.039 4.080 -5.384 6.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.183 4.183 3 Si 0.689 3.311 4 C -0.162 4.162 5 C -0.079 4.079 6 C -0.185 4.185 7 C 0.076 3.924 8 O -0.233 6.233 9 C -0.043 4.043 10 C 0.298 3.702 11 O -0.453 6.453 12 N -0.362 5.362 13 C 0.010 3.990 14 C -0.138 4.138 15 H 0.127 0.873 16 C -0.170 4.170 17 C -0.005 4.005 18 H 0.147 0.853 19 N -0.121 5.121 20 C -0.181 4.181 21 C -0.210 4.210 22 N -0.260 5.260 23 C -0.109 4.109 24 C -0.167 4.167 25 C -0.218 4.218 26 C -0.094 4.094 27 H 0.245 0.755 28 H 0.120 0.880 29 H -0.233 1.233 30 H -0.208 1.208 31 H 0.150 0.850 32 H 0.144 0.856 33 H 0.142 0.858 34 H 0.147 0.853 35 H 0.259 0.741 36 H 0.088 0.912 37 H 0.078 0.922 38 H 0.137 0.863 39 H 0.089 0.911 40 H 0.216 0.784 41 H 0.191 0.809 42 H 0.241 0.759 43 H 0.101 0.899 44 H 0.135 0.865 45 H 0.183 0.817 46 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.383 3.737 -4.074 5.541 hybrid contribution -0.044 -0.941 -0.175 0.958 sum -0.428 2.796 -4.249 5.104 Atomic orbital electron populations 1.86461 1.17497 1.82222 1.50505 1.25181 0.85149 1.11022 0.96963 0.93755 0.77736 0.74900 0.84752 1.20362 1.02071 0.95315 0.98442 1.20894 0.97210 0.94049 0.95760 1.20618 1.01565 1.01253 0.95076 1.19202 0.94640 0.92010 0.86576 1.86130 1.65165 1.40375 1.31674 1.22773 0.97685 0.94388 0.89455 1.20525 0.78315 0.87484 0.83897 1.90774 1.55705 1.20294 1.78574 1.45666 1.51555 1.16932 1.22093 1.21356 0.98421 0.93252 0.85998 1.23036 0.98167 0.98049 0.94536 0.87270 1.23369 1.02631 0.97129 0.93885 1.22548 0.86124 0.89367 1.02492 0.85307 1.45447 1.26531 1.33111 1.07033 1.23169 0.98301 1.03247 0.93395 1.22644 1.02957 1.03463 0.91956 1.70277 1.20020 1.23928 1.11798 1.25445 0.94146 0.95228 0.96042 1.23527 0.97917 1.01913 0.93311 1.21505 1.05669 0.93304 1.01285 1.21072 0.95424 1.00057 0.92815 0.75512 0.88027 1.23274 1.20798 0.85003 0.85607 0.85849 0.85321 0.74135 0.91167 0.92237 0.86344 0.91077 0.78352 0.80896 0.75885 0.89859 0.86462 0.81694 0.82979 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.19 12.77 -148.98 -1.90 -2.09 16 2 C -0.07 0.06 2.82 71.24 0.20 0.26 16 3 Si 0.78 -2.76 29.78 68.60 2.04 -0.72 16 4 C -0.16 0.04 5.39 -19.85 -0.11 -0.07 16 5 C -0.06 -0.15 9.60 22.25 0.21 0.06 16 6 C -0.17 -0.71 9.99 22.37 0.22 -0.49 16 7 C 0.12 0.29 6.69 22.51 0.15 0.44 16 8 O -0.32 -1.45 9.67 -73.41 -0.71 -2.16 16 9 C 0.03 -0.18 5.22 71.23 0.37 0.19 16 10 C 0.51 0.00 7.91 87.66 0.69 0.69 16 11 O -0.57 -7.00 16.50 16.00 0.26 -6.74 16 12 N -0.71 5.78 5.56 -463.05 -2.57 3.20 16 13 C 0.13 -0.98 5.51 86.38 0.48 -0.50 16 14 C -0.12 1.41 3.26 -10.18 -0.03 1.37 16 15 H 0.11 -1.42 5.59 -2.39 -0.01 -1.43 16 16 C -0.13 1.36 7.33 31.12 0.23 1.59 16 17 C 0.10 -0.95 4.87 45.52 0.22 -0.73 16 18 H 0.13 -1.56 8.14 -2.39 -0.02 -1.58 16 19 N -0.44 1.53 2.94 -503.78 -1.48 0.05 16 20 C -0.05 0.05 11.58 83.09 0.96 1.02 16 21 C -0.06 -0.27 11.87 83.52 0.99 0.72 16 22 N -0.54 -3.99 11.25 -200.31 -2.25 -6.24 16 23 C 0.17 -0.05 11.24 180.26 2.03 1.98 16 24 C -0.13 1.60 7.09 31.21 0.22 1.82 16 25 C -0.20 0.72 9.04 22.36 0.20 0.92 16 26 C -0.08 0.27 8.66 22.26 0.19 0.46 16 27 H 0.39 -3.12 8.70 -74.06 -0.64 -3.76 16 28 H 0.10 0.10 7.96 -2.39 -0.02 0.08 16 29 H -0.30 -1.44 7.11 99.48 0.71 -0.74 16 30 H -0.28 -0.08 7.11 99.48 0.71 0.63 16 31 H 0.13 0.25 8.06 -2.91 -0.02 0.22 16 32 H 0.13 0.61 8.06 -2.91 -0.02 0.59 16 33 H 0.12 -1.39 7.65 -2.39 -0.02 -1.41 16 34 H 0.13 -1.57 7.67 -2.39 -0.02 -1.59 16 35 H 0.42 -6.52 8.47 -92.71 -0.79 -7.30 16 36 H 0.07 -0.39 7.85 -2.39 -0.02 -0.41 16 37 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.12 -1.44 8.10 -2.39 -0.02 -1.46 16 39 H 0.07 -0.50 8.14 -2.39 -0.02 -0.52 16 40 H 0.20 -1.45 8.06 -2.91 -0.02 -1.48 16 41 H 0.17 0.24 8.06 -2.91 -0.02 0.22 16 42 H 0.23 -1.64 5.80 -2.91 -0.02 -1.65 16 43 H 0.08 -0.96 8.06 -2.39 -0.02 -0.98 16 44 H 0.12 -1.61 7.90 -2.39 -0.02 -1.62 16 45 H 0.17 -1.84 6.30 -2.91 -0.02 -1.86 16 46 H 0.15 -1.31 4.87 -2.91 -0.01 -1.32 16 Total: 0.00 -32.83 382.34 0.26 -32.57 By element: Atomic # 1 Polarization: -27.26 SS G_CDS: -0.36 Total: -27.62 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: 7.23 Total: 9.75 kcal Atomic # 7 Polarization: 3.32 SS G_CDS: -6.31 Total: -2.99 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -2.35 Total: -10.99 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: 2.04 Total: -0.72 kcal Total: -32.83 0.26 -32.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.597 kcal (2) G-P(sol) polarization free energy of solvation -32.825 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.568 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.029 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds