Wall clock time and date at job start Sun Mar 7 2021 13:32:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.46979 * 2 1 4 4 C 1.50701 * 109.47202 * 240.00159 * 2 1 3 5 5 C 1.38232 * 119.97343 * 119.99823 * 4 2 1 6 6 C 1.38294 * 120.11124 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05499 * 359.97438 * 6 5 4 8 8 C 1.38756 * 119.94212 * 0.28466 * 7 6 5 9 9 O 1.35904 * 120.05096 * 179.71799 * 8 7 6 10 10 C 1.42900 * 117.00131 * 359.97438 * 9 8 7 11 11 C 1.52997 * 109.47009 * 180.02562 * 10 9 8 12 12 C 1.50695 * 109.47483 * 180.02562 * 11 10 9 13 13 O 1.21279 * 119.99498 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00441 * 179.97438 * 12 11 10 15 15 C 1.46497 * 120.00039 * 179.97438 * 14 12 11 16 16 C 1.53007 * 109.46935 * 180.02562 * 15 14 12 17 17 H 1.08992 * 112.84881 * 45.33181 * 16 15 14 18 18 C 1.53781 * 113.61053 * 176.53339 * 16 15 14 19 19 C 1.53779 * 87.08153 * 139.97915 * 18 16 15 20 20 H 1.08994 * 113.61383 * 220.01328 * 19 18 16 21 21 N 1.46504 * 113.61500 * 89.11188 * 19 18 16 22 22 C 1.36878 * 126.39852 * 120.00060 * 21 19 18 23 23 C 1.34672 * 106.82030 * 179.97438 * 22 21 19 24 24 N 1.34128 * 108.01790 * 0.02562 * 23 22 21 25 25 C 1.30496 * 109.25553 * 359.72031 * 24 23 22 26 26 C 1.53784 * 113.61284 * 274.13731 * 16 15 14 27 27 C 1.38173 * 119.96798 * 299.97865 * 4 2 1 28 28 H 0.96704 * 114.00011 * 300.00586 * 1 2 3 29 29 H 1.08997 * 109.47255 * 119.99837 * 2 1 3 30 30 H 1.48495 * 109.99753 * 178.68196 * 3 2 1 31 31 H 1.48505 * 109.99870 * 299.99830 * 3 2 1 32 32 H 1.08002 * 119.94710 * 0.02562 * 5 4 2 33 33 H 1.07999 * 119.97251 * 180.02562 * 6 5 4 34 34 H 1.08002 * 120.02504 * 180.02562 * 7 6 5 35 35 H 1.09000 * 109.46950 * 300.00206 * 10 9 8 36 36 H 1.08994 * 109.46928 * 60.00366 * 10 9 8 37 37 H 1.09003 * 109.47053 * 300.00292 * 11 10 9 38 38 H 1.09002 * 109.47226 * 59.99701 * 11 10 9 39 39 H 0.96995 * 120.00018 * 0.02562 * 14 12 11 40 40 H 1.08998 * 109.47440 * 299.99792 * 15 14 12 41 41 H 1.08997 * 109.47421 * 60.00453 * 15 14 12 42 42 H 1.09009 * 113.60994 * 254.52565 * 18 16 15 43 43 H 1.08997 * 113.62058 * 25.34491 * 18 16 15 44 44 H 1.08007 * 126.59150 * 0.03799 * 22 21 19 45 45 H 1.08000 * 125.99141 * 180.02562 * 23 22 21 46 46 H 1.08004 * 125.65359 * 180.29322 * 25 24 23 47 47 H 1.09001 * 113.61374 * 334.56411 * 26 16 15 48 48 H 1.08996 * 113.61272 * 105.47106 * 26 16 15 49 49 H 1.07997 * 120.02623 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7260 -0.0380 -2.1400 6 6 3.1882 -0.6870 -3.2704 7 6 2.8570 -2.0093 -3.4930 8 6 2.0550 -2.6848 -2.5842 9 8 1.7230 -3.9842 -2.8039 10 6 2.2343 -4.5926 -3.9915 11 6 1.7578 -6.0445 -4.0665 12 6 2.2975 -6.6864 -5.3186 13 8 2.9942 -6.0454 -6.0766 14 7 2.0059 -7.9726 -5.5961 15 6 2.5301 -8.5963 -6.8136 16 6 2.0537 -10.0484 -6.8885 17 1 0.9944 -10.1587 -6.6567 18 6 2.4812 -10.7712 -8.1768 19 6 2.7489 -12.0067 -7.3013 20 1 3.6494 -12.5533 -7.5811 21 7 1.5809 -12.8763 -7.1404 22 6 1.4901 -14.1911 -7.5101 23 6 0.2507 -14.6034 -7.1823 24 7 -0.3979 -13.5683 -6.6282 25 6 0.3946 -12.5321 -6.5947 26 6 2.9567 -11.0330 -6.1270 27 6 1.5975 -2.0334 -1.4483 28 1 -0.3933 0.4418 0.7650 29 1 1.7924 -0.5138 0.8900 30 1 3.5345 1.7703 0.0321 31 1 1.5615 2.4679 -1.2086 32 1 2.9865 0.9959 -1.9676 33 1 3.8092 -0.1596 -3.9794 34 1 3.2185 -2.5158 -4.3757 35 1 1.8739 -4.0468 -4.8635 36 1 3.3238 -4.5679 -3.9722 37 1 2.1179 -6.5906 -3.1946 38 1 0.6683 -6.0689 -4.0859 39 1 1.4484 -8.4851 -4.9900 40 1 2.1697 -8.0507 -7.6856 41 1 3.6197 -8.5716 -6.7944 42 1 1.6685 -10.9093 -8.8901 43 1 3.3791 -10.3552 -8.6336 44 1 2.2642 -14.7843 -7.9743 45 1 -0.1508 -15.5938 -7.3383 46 1 0.1427 -11.5595 -6.1983 47 1 3.9859 -10.6896 -6.0216 48 1 2.5276 -11.3822 -5.1878 49 1 0.9773 -2.5584 -0.7370 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:32:45 Heat of formation + Delta-G solvation = 21.233804 kcal Electronic energy + Delta-G solvation = -29839.415984 eV Core-core repulsion = 25542.856647 eV Total energy + Delta-G solvation = -4296.559337 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.29591 -41.39966 -40.94623 -40.03203 -39.00294 -37.30503 -35.89288 -33.64109 -33.16306 -32.55699 -30.94879 -30.32684 -29.18945 -27.22209 -26.97939 -25.63980 -24.36839 -23.65150 -22.50168 -22.00214 -21.85832 -21.44566 -20.94276 -19.15879 -18.40947 -18.10445 -17.91682 -17.58689 -17.51576 -17.28438 -16.87887 -16.64975 -16.18323 -16.11764 -15.82254 -15.71919 -15.33402 -15.00036 -14.88924 -14.73559 -14.55603 -14.49982 -14.31747 -14.09170 -13.97978 -13.84390 -13.69839 -13.41983 -13.25497 -12.96914 -12.79903 -12.33118 -12.29144 -12.05932 -12.03158 -11.88986 -11.83490 -11.71315 -11.07432 -10.90408 -10.58057 -10.40147 -10.29988 -9.84000 -9.48918 -9.22350 -4.96526 0.23707 0.42406 1.03352 1.26663 1.44518 1.62157 1.63323 1.65001 1.98884 2.24817 2.37546 2.67044 2.90935 3.05559 3.26654 3.34179 3.37663 3.46388 3.56615 3.74522 3.78023 3.80885 3.85684 3.87809 3.95172 3.97414 4.02190 4.20733 4.23634 4.24289 4.27635 4.28720 4.39166 4.45923 4.48714 4.49800 4.54607 4.56652 4.58421 4.64640 4.69781 4.76217 4.90207 4.99784 5.18311 5.26930 5.27902 5.38699 5.46823 5.68416 5.78344 6.18303 6.21998 6.38360 6.61557 6.99357 7.12653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.073 4.073 3 Si 0.687 3.313 4 C -0.037 4.037 5 C -0.162 4.162 6 C -0.071 4.071 7 C -0.203 4.203 8 C 0.134 3.866 9 O -0.315 6.315 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.521 3.479 13 O -0.538 6.538 14 N -0.729 5.729 15 C 0.130 3.870 16 C -0.132 4.132 17 H 0.102 0.898 18 C -0.134 4.134 19 C 0.105 3.895 20 H 0.115 0.885 21 N -0.443 5.443 22 C -0.053 4.053 23 C -0.029 4.029 24 N -0.492 5.492 25 C 0.177 3.823 26 C -0.139 4.139 27 C -0.121 4.121 28 H 0.383 0.617 29 H 0.077 0.923 30 H -0.255 1.255 31 H -0.250 1.250 32 H 0.119 0.881 33 H 0.130 0.870 34 H 0.134 0.866 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.074 0.926 41 H 0.074 0.926 42 H 0.083 0.917 43 H 0.107 0.893 44 H 0.175 0.825 45 H 0.171 0.829 46 H 0.201 0.799 47 H 0.107 0.893 48 H 0.082 0.918 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.415 -0.547 2.409 3.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.588 3.412 4 C -0.038 4.038 5 C -0.180 4.180 6 C -0.089 4.089 7 C -0.221 4.221 8 C 0.089 3.911 9 O -0.229 6.229 10 C -0.002 4.002 11 C -0.182 4.182 12 C 0.307 3.693 13 O -0.414 6.414 14 N -0.381 5.381 15 C 0.007 3.993 16 C -0.150 4.150 17 H 0.120 0.880 18 C -0.173 4.173 19 C 0.000 4.000 20 H 0.133 0.867 21 N -0.126 5.126 22 C -0.185 4.185 23 C -0.177 4.177 24 N -0.210 5.210 25 C -0.105 4.105 26 C -0.177 4.177 27 C -0.140 4.140 28 H 0.231 0.769 29 H 0.095 0.905 30 H -0.180 1.180 31 H -0.175 1.175 32 H 0.137 0.863 33 H 0.148 0.852 34 H 0.152 0.848 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.127 0.873 39 H 0.238 0.762 40 H 0.092 0.908 41 H 0.092 0.908 42 H 0.102 0.898 43 H 0.126 0.874 44 H 0.192 0.808 45 H 0.188 0.812 46 H 0.217 0.783 47 H 0.125 0.875 48 H 0.101 0.899 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.691 0.116 1.239 2.965 hybrid contribution 0.783 -0.873 -0.476 1.266 sum 3.474 -0.758 0.763 3.637 Atomic orbital electron populations 1.86500 1.17040 1.81838 1.49699 1.24719 0.85860 1.10483 0.97282 0.95398 0.80590 0.77812 0.87370 1.19119 0.96562 0.93188 0.94900 1.20781 1.02013 0.99332 0.95889 1.20872 0.97863 0.93832 0.96379 1.21371 1.03176 0.96371 1.01223 1.18926 0.94497 0.83251 0.94410 1.85974 1.70992 1.22820 1.43088 1.22417 0.99301 0.92123 0.86328 1.21467 1.03992 0.95421 0.97279 1.20295 0.80274 0.81728 0.87022 1.90762 1.37855 1.62608 1.50209 1.45920 1.54028 1.12400 1.25758 1.21365 0.99254 0.91338 0.87380 1.23061 1.00623 0.93610 0.97714 0.88008 1.23360 1.03621 0.93942 0.96362 1.22345 0.87688 0.91082 0.98848 0.86693 1.45281 1.12171 1.09897 1.45246 1.22786 1.01532 0.85134 1.09052 1.22380 0.91939 0.99240 1.04103 1.70347 1.31546 0.99511 1.19604 1.24996 0.82091 1.00577 1.02860 1.23533 1.01810 0.94914 0.97445 1.20212 1.02740 0.93924 0.97118 0.76936 0.90517 1.17979 1.17498 0.86324 0.85174 0.84809 0.90906 0.90922 0.87392 0.87334 0.76181 0.90805 0.90767 0.89848 0.87433 0.80794 0.81188 0.78289 0.87491 0.89922 0.84605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.38 12.74 -35.23 -0.45 -0.83 16 2 C -0.07 -0.04 2.81 36.01 0.10 0.06 16 3 Si 0.69 -0.45 29.79 -169.99 -5.06 -5.52 16 4 C -0.04 -0.12 5.42 -104.65 -0.57 -0.69 16 5 C -0.16 -0.52 8.67 -39.56 -0.34 -0.86 16 6 C -0.07 -0.18 10.04 -39.60 -0.40 -0.58 16 7 C -0.20 -0.54 9.04 -39.43 -0.36 -0.90 16 8 C 0.13 0.46 6.69 -39.22 -0.26 0.20 16 9 O -0.31 -0.79 10.14 -19.44 -0.20 -0.99 16 10 C 0.07 0.05 4.03 37.16 0.15 0.20 16 11 C -0.14 0.27 6.07 -27.89 -0.17 0.10 16 12 C 0.52 -0.14 7.83 -10.99 -0.09 -0.23 16 13 O -0.54 -2.09 15.98 5.56 0.09 -2.00 16 14 N -0.73 2.20 5.56 -60.30 -0.33 1.87 16 15 C 0.13 -0.40 5.50 -4.04 -0.02 -0.42 16 16 C -0.13 0.62 3.24 -89.80 -0.29 0.33 16 17 H 0.10 -0.50 5.65 -51.93 -0.29 -0.79 16 18 C -0.13 0.57 7.35 -25.92 -0.19 0.38 16 19 C 0.10 -0.39 4.88 -67.02 -0.33 -0.71 16 20 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 21 N -0.44 0.38 2.94 -110.49 -0.33 0.05 16 22 C -0.05 0.00 11.58 -16.56 -0.19 -0.19 16 23 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 24 N -0.49 -1.88 11.25 -14.66 -0.16 -2.04 16 25 C 0.18 0.11 11.18 -90.38 -1.01 -0.90 16 26 C -0.14 0.66 7.06 -25.83 -0.18 0.48 16 27 C -0.12 -0.43 9.55 -39.43 -0.38 -0.81 16 28 H 0.38 -1.73 8.74 45.56 0.40 -1.34 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 31 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 32 H 0.12 0.29 4.87 -52.49 -0.26 0.04 16 33 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 34 H 0.13 0.17 6.30 -52.49 -0.33 -0.16 16 35 H 0.07 0.08 7.62 -51.93 -0.40 -0.31 16 36 H 0.07 0.06 7.62 -51.93 -0.40 -0.33 16 37 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 39 H 0.40 -2.23 8.47 -40.82 -0.35 -2.58 16 40 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.07 -0.18 7.88 -51.93 -0.41 -0.59 16 42 H 0.08 -0.24 8.14 -51.92 -0.42 -0.67 16 43 H 0.11 -0.56 8.10 -51.93 -0.42 -0.98 16 44 H 0.17 -0.48 8.06 -52.48 -0.42 -0.90 16 45 H 0.17 0.04 8.06 -52.49 -0.42 -0.38 16 46 H 0.20 -0.48 5.87 -52.48 -0.31 -0.79 16 47 H 0.11 -0.57 7.92 -51.93 -0.41 -0.98 16 48 H 0.08 -0.34 8.01 -51.93 -0.42 -0.75 16 49 H 0.14 0.38 8.06 -52.49 -0.42 -0.05 16 LS Contribution 403.38 15.07 6.08 6.08 Total: 0.00 -11.88 403.38 -12.10 -23.98 By element: Atomic # 1 Polarization: -8.79 SS G_CDS: -7.00 Total: -15.79 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: -4.73 Total: -4.82 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.83 Total: -0.12 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.56 Total: -3.82 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.52 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.88 -12.10 -23.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.218 kcal (2) G-P(sol) polarization free energy of solvation -11.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.335 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.984 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds