Wall clock time and date at job start Sun Mar 7 2021 13:32:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47358 * 2 1 4 4 C 1.50697 * 109.46656 * 120.00539 * 2 1 3 5 5 C 1.38247 * 119.96926 * 245.01644 * 4 2 1 6 6 C 1.38289 * 120.11477 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05217 * 359.76455 * 6 5 4 8 8 C 1.38754 * 119.94319 * 0.50923 * 7 6 5 9 9 O 1.35909 * 120.05304 * 179.74010 * 8 7 6 10 10 C 1.42895 * 116.99961 * 359.73289 * 9 8 7 11 11 C 1.52997 * 109.46920 * 179.97438 * 10 9 8 12 12 C 1.53006 * 109.47127 * 180.02562 * 11 10 9 13 13 C 1.50698 * 109.47184 * 180.02562 * 12 11 10 14 14 O 1.21282 * 120.00025 * 359.97438 * 13 12 11 15 15 N 1.34776 * 120.00035 * 180.02562 * 13 12 11 16 16 C 1.46504 * 119.99735 * 179.97438 * 15 13 12 17 17 C 1.53006 * 109.46883 * 179.97438 * 16 15 13 18 18 H 1.08997 * 112.85098 * 45.32634 * 17 16 15 19 19 C 1.53774 * 113.61380 * 176.52701 * 17 16 15 20 20 C 1.53783 * 87.07931 * 139.97850 * 19 17 16 21 21 H 1.09001 * 113.61468 * 219.93044 * 20 19 17 22 22 N 1.46497 * 113.61303 * 89.11783 * 20 19 17 23 23 C 1.36882 * 126.39952 * 120.00233 * 22 20 19 24 24 C 1.34671 * 106.81961 * 180.02562 * 23 22 20 25 25 N 1.34122 * 108.01847 * 359.97438 * 24 23 22 26 26 C 1.30496 * 109.25964 * 359.73209 * 25 24 23 27 27 C 1.53785 * 113.61139 * 274.13496 * 17 16 15 28 28 C 1.38162 * 119.97853 * 64.99309 * 4 2 1 29 29 H 0.96710 * 113.99760 * 59.99886 * 1 2 3 30 30 H 1.09007 * 109.46856 * 239.99498 * 2 1 3 31 31 H 1.48493 * 109.99947 * 298.68051 * 3 2 1 32 32 H 1.48499 * 109.99813 * 60.00128 * 3 2 1 33 33 H 1.08007 * 119.94038 * 359.97438 * 5 4 2 34 34 H 1.08004 * 119.97195 * 180.02562 * 6 5 4 35 35 H 1.08000 * 120.02805 * 180.27865 * 7 6 5 36 36 H 1.08996 * 109.47554 * 59.99926 * 10 9 8 37 37 H 1.09001 * 109.47106 * 299.99370 * 10 9 8 38 38 H 1.09001 * 109.47502 * 60.00157 * 11 10 9 39 39 H 1.09001 * 109.47289 * 299.99954 * 11 10 9 40 40 H 1.09001 * 109.47002 * 299.99574 * 12 11 10 41 41 H 1.08993 * 109.46955 * 60.00011 * 12 11 10 42 42 H 0.96998 * 119.99962 * 359.97438 * 15 13 12 43 43 H 1.08998 * 109.47135 * 299.99021 * 16 15 13 44 44 H 1.08993 * 109.47378 * 60.00104 * 16 15 13 45 45 H 1.09003 * 113.61426 * 254.52509 * 19 17 16 46 46 H 1.08995 * 113.61584 * 25.43536 * 19 17 16 47 47 H 1.08003 * 126.59337 * 359.96059 * 23 22 20 48 48 H 1.07998 * 125.99208 * 180.02562 * 24 23 22 49 49 H 1.08004 * 125.65872 * 180.28753 * 26 25 24 50 50 H 1.08996 * 113.61425 * 334.56598 * 27 17 16 51 51 H 1.08998 * 113.61309 * 105.46973 * 27 17 16 52 52 H 1.07997 * 120.02750 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 2.6383 -0.0118 2.1911 6 6 3.1001 -0.6607 3.3217 7 6 2.8516 -2.0081 3.4958 8 6 2.1471 -2.7129 2.5303 9 8 1.9059 -4.0400 2.6970 10 6 2.4119 -4.6469 3.8876 11 6 2.0444 -6.1320 3.8989 12 6 2.5856 -6.7817 5.1740 13 6 2.2241 -8.2446 5.1849 14 8 1.5951 -8.7207 4.2637 15 7 2.5990 -9.0238 6.2187 16 6 2.2470 -10.4459 6.2294 17 6 2.7884 -11.0956 7.5045 18 1 2.5960 -10.5007 8.3973 19 6 2.3992 -12.5756 7.6548 20 6 3.8232 -12.8151 8.1836 21 1 4.2723 -13.7412 7.8248 22 7 3.9465 -12.6478 9.6338 23 6 4.3499 -13.6005 10.5300 24 6 4.3189 -13.0275 11.7483 25 7 3.9082 -11.7593 11.6000 26 6 3.6891 -11.5230 10.3355 27 6 4.2462 -11.5701 7.3829 28 6 1.6843 -2.0596 1.3977 29 1 -0.3933 0.4418 -0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 1.5880 2.4585 -1.2242 32 1 1.5616 2.4678 1.2085 33 1 2.8303 1.0428 2.0585 34 1 3.6519 -0.1124 4.0710 35 1 3.2085 -2.5135 4.3810 36 1 1.9751 -4.1582 4.7585 37 1 3.4963 -4.5404 3.9170 38 1 2.4809 -6.6211 3.0280 39 1 0.9599 -6.2382 3.8696 40 1 3.6701 -6.6756 5.2037 41 1 2.1487 -6.2926 6.0446 42 1 3.1018 -8.6430 6.9556 43 1 1.1627 -10.5520 6.1995 44 1 2.6843 -10.9350 5.3591 45 1 1.6220 -12.7493 8.3991 46 1 2.1966 -13.0724 6.7060 47 1 4.6369 -14.6168 10.3037 48 1 4.5798 -13.5051 12.6812 49 1 3.3544 -10.5843 9.9192 50 1 4.5494 -11.7914 6.3596 51 1 4.9579 -10.9331 7.9080 52 1 1.1320 -2.6051 0.6469 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:32:49 Heat of formation + Delta-G solvation = 14.709769 kcal Electronic energy + Delta-G solvation = -31370.238864 eV Core-core repulsion = 26917.859005 eV Total energy + Delta-G solvation = -4452.379860 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.188 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.28991 -41.25240 -40.97134 -40.00357 -39.06865 -37.41692 -35.85741 -34.93672 -33.35822 -32.54782 -31.27176 -30.35684 -29.68046 -27.91137 -27.19395 -26.74411 -24.89776 -23.64743 -23.27598 -22.49022 -21.85886 -21.73805 -21.44998 -20.91425 -18.91927 -18.52318 -18.26807 -17.96389 -17.54608 -17.34127 -17.18250 -16.94550 -16.74890 -16.27853 -16.11443 -15.88329 -15.76222 -15.56035 -15.06994 -15.03425 -14.79728 -14.62020 -14.50444 -14.24923 -14.15064 -13.85348 -13.82817 -13.70859 -13.54259 -13.39902 -13.33234 -13.12822 -12.68210 -12.45608 -12.30647 -12.21274 -12.01012 -11.88075 -11.86407 -11.66359 -11.59084 -10.95086 -10.89151 -10.57429 -10.51478 -10.21904 -9.85202 -9.48637 -9.16571 -4.95640 0.27313 0.48881 1.03790 1.27011 1.56338 1.60155 1.64008 1.83230 1.95920 2.24947 2.29848 2.68931 2.92551 3.06792 3.28822 3.35745 3.36528 3.52133 3.58715 3.75863 3.76891 3.81690 3.85089 3.89477 3.95653 3.98578 4.08064 4.11469 4.15755 4.23064 4.25978 4.29473 4.29707 4.30567 4.39280 4.41914 4.50226 4.51659 4.57035 4.59193 4.67383 4.69770 4.76970 4.92611 4.94203 5.03463 5.13288 5.26245 5.29431 5.33180 5.43210 5.53350 5.74910 5.78610 6.18800 6.32284 6.44315 6.46195 7.11773 7.12834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.078 4.078 3 Si 0.688 3.312 4 C -0.034 4.034 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.312 6.312 10 C 0.060 3.940 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.514 3.486 14 O -0.534 6.534 15 N -0.733 5.733 16 C 0.130 3.870 17 C -0.131 4.131 18 H 0.101 0.899 19 C -0.134 4.134 20 C 0.104 3.896 21 H 0.115 0.885 22 N -0.442 5.442 23 C -0.053 4.053 24 C -0.029 4.029 25 N -0.493 5.493 26 C 0.177 3.823 27 C -0.139 4.139 28 C -0.125 4.125 29 H 0.380 0.620 30 H 0.078 0.922 31 H -0.261 1.261 32 H -0.255 1.255 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.130 0.870 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.098 0.902 41 H 0.099 0.901 42 H 0.402 0.598 43 H 0.072 0.928 44 H 0.073 0.927 45 H 0.083 0.917 46 H 0.107 0.893 47 H 0.175 0.825 48 H 0.171 0.829 49 H 0.201 0.799 50 H 0.107 0.893 51 H 0.082 0.918 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.243 -0.813 -0.426 5.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.589 3.411 4 C -0.034 4.034 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.086 3.914 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.300 3.700 14 O -0.410 6.410 15 N -0.385 5.385 16 C 0.006 3.994 17 C -0.150 4.150 18 H 0.119 0.881 19 C -0.173 4.173 20 C 0.000 4.000 21 H 0.133 0.867 22 N -0.126 5.126 23 C -0.185 4.185 24 C -0.177 4.177 25 N -0.211 5.211 26 C -0.105 4.105 27 C -0.177 4.177 28 C -0.144 4.144 29 H 0.228 0.772 30 H 0.096 0.904 31 H -0.187 1.187 32 H -0.180 1.180 33 H 0.146 0.854 34 H 0.149 0.851 35 H 0.148 0.852 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.117 0.883 41 H 0.117 0.883 42 H 0.236 0.764 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.101 0.899 46 H 0.126 0.874 47 H 0.192 0.808 48 H 0.188 0.812 49 H 0.217 0.783 50 H 0.125 0.875 51 H 0.100 0.900 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 4.441 -0.249 -0.170 4.451 hybrid contribution -0.636 -0.631 -0.501 1.026 sum 3.804 -0.880 -0.671 3.962 Atomic orbital electron populations 1.86607 1.17629 1.80203 1.49753 1.24855 0.84627 1.11148 0.98158 0.94946 0.91658 0.74325 0.80148 1.19009 0.96850 0.92822 0.94750 1.20906 1.01704 0.99753 0.94815 1.20884 0.97718 0.93669 0.96871 1.21303 1.04728 0.95941 1.00390 1.18979 0.95010 0.82926 0.94453 1.86078 1.74284 1.19936 1.42238 1.22817 0.98747 0.93729 0.86284 1.21231 1.03508 0.91883 0.97704 1.21530 1.03511 0.92386 1.00374 1.20590 0.78984 0.88630 0.81773 1.90763 1.39221 1.75467 1.35524 1.45990 1.58621 1.10057 1.23871 1.21338 1.00764 0.80357 0.96908 1.23053 0.96400 0.96791 0.98713 0.88083 1.23362 0.95963 0.95110 1.02875 1.22356 0.98934 1.01106 0.77598 0.86713 1.45286 1.49367 1.11110 1.06812 1.22788 1.09268 0.96443 0.90005 1.22374 1.06201 0.91555 0.97539 1.70342 1.17660 1.16808 1.16256 1.24991 1.05410 0.92628 0.87482 1.23526 0.96759 0.95890 1.01484 1.20244 1.02887 0.93777 0.97455 0.77185 0.90394 1.18658 1.17961 0.85398 0.85129 0.85225 0.91782 0.91712 0.89800 0.89819 0.88323 0.88309 0.76426 0.90922 0.90884 0.89872 0.87433 0.80797 0.81201 0.78297 0.87493 0.89971 0.84975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.06 12.81 -35.23 -0.45 -1.51 16 2 C -0.08 -0.05 2.79 36.00 0.10 0.05 16 3 Si 0.69 -0.42 29.85 -169.99 -5.07 -5.49 16 4 C -0.03 -0.07 5.38 -104.65 -0.56 -0.64 16 5 C -0.15 -0.16 8.67 -39.56 -0.34 -0.51 16 6 C -0.07 -0.03 10.04 -39.61 -0.40 -0.42 16 7 C -0.20 -0.17 9.04 -39.43 -0.36 -0.53 16 8 C 0.13 0.35 6.69 -39.22 -0.26 0.09 16 9 O -0.31 -0.84 10.14 -19.45 -0.20 -1.03 16 10 C 0.06 -0.05 4.74 37.16 0.18 0.12 16 11 C -0.11 0.06 4.87 -26.73 -0.13 -0.07 16 12 C -0.14 0.43 5.70 -27.88 -0.16 0.27 16 13 C 0.51 -0.15 7.83 -10.99 -0.09 -0.23 16 14 O -0.53 -2.39 15.98 5.56 0.09 -2.30 16 15 N -0.73 2.23 5.56 -60.29 -0.33 1.90 16 16 C 0.13 -0.37 5.50 -4.04 -0.02 -0.39 16 17 C -0.13 0.61 3.24 -89.81 -0.29 0.32 16 18 H 0.10 -0.49 5.65 -51.93 -0.29 -0.79 16 19 C -0.13 0.56 7.35 -25.92 -0.19 0.37 16 20 C 0.10 -0.38 4.88 -67.03 -0.33 -0.71 16 21 H 0.11 -0.54 8.14 -51.93 -0.42 -0.96 16 22 N -0.44 0.40 2.94 -110.50 -0.33 0.08 16 23 C -0.05 0.00 11.58 -16.56 -0.19 -0.19 16 24 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 25 N -0.49 -1.82 11.25 -14.67 -0.16 -1.99 16 26 C 0.18 0.09 11.18 -90.37 -1.01 -0.92 16 27 C -0.14 0.66 7.06 -25.83 -0.18 0.48 16 28 C -0.12 -0.39 9.62 -39.44 -0.38 -0.77 16 29 H 0.38 -0.83 8.74 45.56 0.40 -0.43 16 30 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 32 H -0.25 -0.62 7.05 56.52 0.40 -0.22 16 33 H 0.13 -0.09 4.86 -52.48 -0.26 -0.34 16 34 H 0.13 -0.27 8.06 -52.48 -0.42 -0.70 16 35 H 0.13 -0.19 6.30 -52.49 -0.33 -0.52 16 36 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 37 H 0.06 -0.16 7.67 -51.93 -0.40 -0.55 16 38 H 0.08 0.07 8.10 -51.93 -0.42 -0.35 16 39 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 40 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 41 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 42 H 0.40 -2.30 8.47 -40.82 -0.35 -2.64 16 43 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.07 -0.15 7.87 -51.93 -0.41 -0.56 16 45 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.11 -0.54 8.10 -51.93 -0.42 -0.97 16 47 H 0.17 -0.48 8.06 -52.48 -0.42 -0.91 16 48 H 0.17 0.03 8.06 -52.49 -0.42 -0.39 16 49 H 0.20 -0.50 5.87 -52.48 -0.31 -0.81 16 50 H 0.11 -0.56 7.92 -51.93 -0.41 -0.97 16 51 H 0.08 -0.34 8.01 -51.93 -0.42 -0.76 16 52 H 0.13 0.40 8.06 -52.49 -0.42 -0.02 16 LS Contribution 424.94 15.07 6.40 6.40 Total: 0.00 -12.36 424.94 -12.73 -25.09 By element: Atomic # 1 Polarization: -9.35 SS G_CDS: -7.85 Total: -17.20 kcal Atomic # 6 Polarization: 0.88 SS G_CDS: -4.83 Total: -3.95 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.83 Total: -0.01 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -0.56 Total: -4.84 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.07 Total: -5.49 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -12.36 -12.73 -25.09 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.802 kcal (2) G-P(sol) polarization free energy of solvation -12.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.092 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds