Wall clock time and date at job start Sun Mar 7 2021 13:33:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47374 * 2 1 4 4 C 1.50703 * 109.47197 * 239.99626 * 2 1 3 5 5 C 1.38242 * 119.94305 * 120.00489 * 4 2 1 6 6 C 1.38170 * 120.05225 * 180.02562 * 5 4 2 7 7 C 1.38703 * 119.94467 * 0.02562 * 6 5 4 8 8 O 1.35908 * 120.05491 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99594 * 0.02562 * 8 7 6 10 10 C 1.50706 * 109.47060 * 179.97438 * 9 8 7 11 11 O 1.21281 * 119.99699 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00080 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99969 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47237 * 179.72043 * 13 12 10 15 15 H 1.08998 * 112.84967 * 316.19646 * 14 13 12 16 16 C 1.53789 * 113.61152 * 87.50111 * 14 13 12 17 17 C 1.53780 * 87.07735 * 139.98241 * 16 14 13 18 18 H 1.09004 * 113.61395 * 220.01775 * 17 16 14 19 19 N 1.46503 * 113.61804 * 89.11693 * 17 16 14 20 20 C 1.36874 * 126.39756 * 142.21367 * 19 17 16 21 21 C 1.34675 * 106.81562 * 179.84474 * 20 19 17 22 22 N 1.34129 * 108.01910 * 0.41971 * 21 20 19 23 23 C 1.30495 * 109.25609 * 359.73715 * 22 21 20 24 24 C 1.53781 * 87.08381 * 334.56357 * 17 16 14 25 25 C 1.38746 * 119.89100 * 0.25418 * 7 6 5 26 26 N 1.48008 * 120.03034 * 179.72536 * 25 7 6 27 27 O 1.21803 * 120.00102 * 180.02562 * 26 25 7 28 28 O 1.21804 * 119.99838 * 359.97438 * 26 25 7 29 29 C 1.38118 * 119.94467 * 359.47241 * 25 7 6 30 30 H 0.96702 * 114.00078 * 300.00819 * 1 2 3 31 31 H 1.09007 * 109.46930 * 119.99687 * 2 1 3 32 32 H 1.48501 * 109.99720 * 178.68070 * 3 2 1 33 33 H 1.48494 * 109.99753 * 299.99602 * 3 2 1 34 34 H 1.08000 * 119.97301 * 0.02562 * 5 4 2 35 35 H 1.08001 * 120.02354 * 180.02562 * 6 5 4 36 36 H 1.09004 * 109.47454 * 60.00038 * 9 8 7 37 37 H 1.08998 * 109.47671 * 299.99818 * 9 8 7 38 38 H 0.97005 * 120.00161 * 359.72088 * 12 10 9 39 39 H 1.09001 * 109.46512 * 299.72412 * 13 12 10 40 40 H 1.08998 * 109.47174 * 59.71534 * 13 12 10 41 41 H 1.09001 * 113.60999 * 254.52627 * 16 14 13 42 42 H 1.09003 * 113.61481 * 25.43474 * 16 14 13 43 43 H 1.07996 * 126.59679 * 359.97438 * 20 19 17 44 44 H 1.08003 * 125.99200 * 180.11900 * 21 20 19 45 45 H 1.08001 * 125.65353 * 180.02562 * 23 22 21 46 46 H 1.08997 * 113.61636 * 270.88696 * 24 17 16 47 47 H 1.08997 * 113.61300 * 139.97975 * 24 17 16 48 48 H 1.08001 * 119.97707 * 180.28056 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7261 -0.0376 -2.1396 6 6 3.1875 -0.6867 -3.2688 7 6 2.8522 -2.0143 -3.4899 8 8 3.3043 -2.6547 -4.6000 9 6 4.1214 -1.8997 -5.4969 10 6 4.5258 -2.7684 -6.6601 11 8 4.1515 -3.9207 -6.7153 12 7 5.3042 -2.2651 -7.6385 13 6 5.6968 -3.1094 -8.7695 14 6 6.5665 -2.2993 -9.7330 15 1 6.1776 -1.2972 -9.9135 16 6 8.0638 -2.3274 -9.3832 17 6 8.3340 -2.4370 -10.8931 18 1 9.1413 -3.1253 -11.1433 19 7 8.4626 -1.1400 -11.5620 20 6 9.3319 -0.8302 -12.5729 21 6 9.1140 0.4599 -12.8924 22 7 8.1447 0.9276 -12.0919 23 6 7.7498 -0.0251 -11.2924 24 6 6.9332 -3.0588 -11.0189 25 6 2.0495 -2.6857 -2.5788 26 7 1.6848 -4.1006 -2.8148 27 8 0.9798 -4.6893 -2.0148 28 8 2.0889 -4.6759 -3.8094 29 6 1.5955 -2.0341 -1.4487 30 1 -0.3933 0.4418 0.7650 31 1 1.7923 -0.5138 0.8901 32 1 3.5346 1.7701 0.0321 33 1 1.5616 2.4678 -1.2085 34 1 2.9866 0.9962 -1.9672 35 1 3.8087 -0.1607 -3.9785 36 1 5.0135 -1.5556 -4.9735 37 1 3.5605 -1.0398 -5.8630 38 1 5.6008 -1.3425 -7.5960 39 1 6.2615 -3.9670 -8.4038 40 1 4.8046 -3.4572 -9.2903 41 1 8.4263 -1.3993 -8.9410 42 1 8.3643 -3.2113 -8.8205 43 1 10.0524 -1.4933 -13.0283 44 1 9.6326 1.0210 -13.6557 45 1 6.9800 0.0631 -10.5400 46 1 6.9245 -4.1426 -10.9034 47 1 6.3829 -2.7213 -11.8972 48 1 0.9744 -2.5576 -0.7369 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:33:14 Heat of formation + Delta-G solvation = 39.305926 kcal Electronic energy + Delta-G solvation = -34879.673410 eV Core-core repulsion = 29908.418922 eV Total energy + Delta-G solvation = -4971.254488 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -43.33017 -43.04563 -41.79647 -40.96708 -40.14472 -39.34166 -37.59703 -37.15096 -35.91643 -33.63807 -33.41956 -32.51362 -30.90900 -30.29858 -28.58153 -27.62601 -27.23473 -26.67296 -24.98290 -24.00033 -22.73306 -22.53947 -21.99228 -21.74296 -21.03954 -20.42625 -19.50691 -19.19738 -18.77026 -18.57007 -18.33831 -18.01470 -17.75654 -17.56824 -17.18376 -16.67386 -16.62199 -16.19342 -16.15123 -16.07912 -15.73713 -15.44271 -15.22835 -14.93983 -14.80758 -14.66524 -14.50059 -14.38282 -14.02278 -13.90200 -13.86917 -13.73814 -13.30697 -13.06681 -12.87691 -12.54846 -12.36374 -12.22759 -12.22096 -12.06782 -11.91951 -11.82761 -11.75514 -11.06030 -10.96099 -10.93724 -10.66298 -10.61106 -10.36327 -9.90619 -9.52096 -5.24085 -1.16257 -0.40435 0.35379 0.50212 0.97238 0.99986 1.03124 1.33461 1.36369 1.60338 1.64477 1.89116 2.10550 2.21473 2.85742 2.87867 2.95238 3.03749 3.05978 3.22972 3.30498 3.34302 3.42579 3.49856 3.50905 3.53215 3.56671 3.72002 3.78076 3.91005 3.93433 4.03220 4.11837 4.18751 4.25672 4.26691 4.36927 4.37323 4.46663 4.46840 4.53362 4.62144 4.65301 4.73180 4.86593 4.88763 5.09268 5.24714 5.39536 5.67228 5.75260 6.12252 6.15310 6.36804 6.92281 6.93104 7.09166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.032 4.032 6 C -0.207 4.207 7 C 0.199 3.801 8 O -0.253 6.253 9 C 0.030 3.970 10 C 0.514 3.486 11 O -0.494 6.494 12 N -0.728 5.728 13 C 0.132 3.868 14 C -0.131 4.131 15 H 0.102 0.898 16 C -0.139 4.139 17 C 0.104 3.896 18 H 0.116 0.884 19 N -0.442 5.442 20 C -0.052 4.052 21 C -0.029 4.029 22 N -0.493 5.493 23 C 0.176 3.824 24 C -0.134 4.134 25 C -0.074 4.074 26 N 0.029 4.971 27 O -0.175 6.175 28 O -0.118 6.118 29 C 0.013 3.987 30 H 0.388 0.612 31 H 0.083 0.917 32 H -0.251 1.251 33 H -0.247 1.247 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.102 0.898 37 H 0.102 0.898 38 H 0.402 0.598 39 H 0.077 0.923 40 H 0.077 0.923 41 H 0.081 0.919 42 H 0.108 0.892 43 H 0.175 0.825 44 H 0.171 0.829 45 H 0.200 0.800 46 H 0.109 0.891 47 H 0.083 0.917 48 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.414 6.537 3.187 8.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.049 4.049 6 C -0.226 4.226 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.049 4.049 10 C 0.297 3.703 11 O -0.366 6.366 12 N -0.383 5.383 13 C 0.010 3.990 14 C -0.150 4.150 15 H 0.120 0.880 16 C -0.177 4.177 17 C 0.000 4.000 18 H 0.134 0.866 19 N -0.126 5.126 20 C -0.184 4.184 21 C -0.177 4.177 22 N -0.210 5.210 23 C -0.106 4.106 24 C -0.172 4.172 25 C -0.158 4.158 26 N 0.550 4.450 27 O -0.384 6.384 28 O -0.342 6.342 29 C -0.006 4.006 30 H 0.236 0.764 31 H 0.101 0.899 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.157 0.843 35 H 0.174 0.826 36 H 0.119 0.881 37 H 0.120 0.880 38 H 0.236 0.764 39 H 0.095 0.905 40 H 0.095 0.905 41 H 0.100 0.900 42 H 0.126 0.874 43 H 0.192 0.808 44 H 0.188 0.812 45 H 0.217 0.783 46 H 0.127 0.873 47 H 0.102 0.898 48 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 4.504 7.077 2.296 8.698 hybrid contribution 0.556 -0.970 -0.226 1.140 sum 5.060 6.108 2.069 8.197 Atomic orbital electron populations 1.86489 1.16659 1.81989 1.50053 1.24642 0.86310 1.10646 0.96515 0.94643 0.80664 0.77572 0.88039 1.19253 1.01038 0.93207 0.97723 1.21117 0.92883 0.99314 0.91615 1.21200 1.07190 0.92777 1.01470 1.18635 0.90055 0.90675 0.85680 1.86500 1.62873 1.37440 1.29374 1.22731 0.96352 0.94967 0.90809 1.19789 0.79295 0.88153 0.83049 1.90877 1.52147 1.17087 1.76506 1.45754 1.53104 1.16105 1.23315 1.21399 0.99019 0.93099 0.85524 1.23066 0.95180 1.00599 0.96148 0.88016 1.23517 0.95275 1.04565 0.94363 1.22316 1.00094 0.83418 0.94177 0.86644 1.45279 1.28995 1.10309 1.27972 1.22793 1.00316 0.99284 0.96023 1.22383 0.99646 0.93081 1.02586 1.70342 1.13405 1.29896 1.07395 1.24977 1.00835 0.81891 1.02916 1.23368 0.94572 1.01436 0.97869 1.20571 1.10295 0.84264 1.00672 1.43306 0.99208 1.02171 1.00363 1.94553 1.34876 1.66620 1.42325 1.94695 1.54969 1.67399 1.17099 1.20813 0.93072 0.93485 0.93203 0.76350 0.89921 1.17600 1.17151 0.84253 0.82618 0.88064 0.88037 0.76404 0.90483 0.90515 0.89999 0.87388 0.80765 0.81180 0.78336 0.87307 0.89800 0.81600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.95 12.74 -35.23 -0.45 0.50 16 2 C -0.07 0.17 2.81 36.01 0.10 0.27 16 3 Si 0.69 -2.63 29.78 -169.99 -5.06 -7.69 16 4 C -0.11 0.01 5.43 -104.60 -0.57 -0.56 16 5 C -0.03 0.04 8.66 -39.60 -0.34 -0.31 16 6 C -0.21 0.32 9.04 -39.43 -0.36 -0.04 16 7 C 0.20 0.35 6.67 -39.22 -0.26 0.09 16 8 O -0.25 -0.68 7.68 -49.80 -0.38 -1.06 16 9 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.51 0.09 7.91 -10.98 -0.09 0.00 16 11 O -0.49 -2.87 16.50 -14.35 -0.24 -3.11 16 12 N -0.73 2.59 5.56 -60.29 -0.33 2.26 16 13 C 0.13 -0.44 5.51 -4.04 -0.02 -0.46 16 14 C -0.13 0.68 3.25 -89.80 -0.29 0.38 16 15 H 0.10 -0.56 5.64 -51.93 -0.29 -0.86 16 16 C -0.14 0.72 7.05 -25.91 -0.18 0.54 16 17 C 0.10 -0.42 4.88 -67.12 -0.33 -0.74 16 18 H 0.12 -0.57 8.14 -51.93 -0.42 -0.99 16 19 N -0.44 0.54 2.94 -110.59 -0.33 0.21 16 20 C -0.05 0.01 11.58 -16.56 -0.19 -0.18 16 21 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 22 N -0.49 -1.68 11.25 -14.66 -0.16 -1.84 16 23 C 0.18 0.03 11.19 -90.38 -1.01 -0.98 16 24 C -0.13 0.61 7.35 -25.92 -0.19 0.42 16 25 C -0.07 -0.27 6.86 -79.81 -0.55 -0.82 16 26 N 0.03 0.20 4.45 34.03 0.15 0.35 16 27 O -0.17 -1.31 18.45 -29.46 -0.54 -1.85 16 28 O -0.12 -1.04 17.24 -36.49 -0.63 -1.67 16 29 C 0.01 0.02 9.11 -39.61 -0.36 -0.34 16 30 H 0.39 -2.59 8.74 45.56 0.40 -2.19 16 31 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 32 H -0.25 0.48 7.11 56.52 0.40 0.88 16 33 H -0.25 0.24 7.11 56.52 0.40 0.64 16 34 H 0.14 -0.38 4.87 -52.49 -0.26 -0.64 16 35 H 0.16 -0.83 6.30 -52.49 -0.33 -1.16 16 36 H 0.10 -0.56 7.66 -51.93 -0.40 -0.95 16 37 H 0.10 -0.53 7.66 -51.93 -0.40 -0.93 16 38 H 0.40 -2.73 8.47 -40.82 -0.35 -3.08 16 39 H 0.08 -0.19 7.84 -51.93 -0.41 -0.60 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.08 -0.38 8.02 -51.93 -0.42 -0.80 16 42 H 0.11 -0.61 7.90 -51.93 -0.41 -1.02 16 43 H 0.18 -0.52 8.06 -52.49 -0.42 -0.94 16 44 H 0.17 0.00 8.06 -52.48 -0.42 -0.42 16 45 H 0.20 -0.60 5.86 -52.49 -0.31 -0.91 16 46 H 0.11 -0.58 8.10 -51.93 -0.42 -1.00 16 47 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 48 H 0.17 0.19 7.61 -52.49 -0.40 -0.21 16 LS Contribution 408.40 15.07 6.15 6.15 Total: 0.00 -15.60 408.40 -12.20 -27.80 By element: Atomic # 1 Polarization: -11.48 SS G_CDS: -5.71 Total: -17.19 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -4.66 Total: -2.87 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.67 Total: 0.98 kcal Atomic # 8 Polarization: -4.95 SS G_CDS: -2.24 Total: -7.19 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: -5.06 Total: -7.69 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -15.60 -12.20 -27.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.107 kcal (2) G-P(sol) polarization free energy of solvation -15.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.502 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.801 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds