Wall clock time and date at job start Sun Mar 7 2021 13:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50695 * 109.47325 * 120.00585 * 2 1 3 5 5 C 1.38245 * 119.97401 * 244.72355 * 4 2 1 6 6 C 1.38284 * 120.11455 * 179.76237 * 5 4 2 7 7 C 1.38127 * 120.05563 * 0.50958 * 6 5 4 8 8 C 1.38755 * 119.94014 * 359.74295 * 7 6 5 9 9 O 1.35898 * 120.04997 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00292 * 0.02562 * 9 8 7 11 11 C 1.50703 * 109.47090 * 180.02562 * 10 9 8 12 12 O 1.21287 * 119.99971 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00146 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99985 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.46842 * 180.02562 * 14 13 11 16 16 H 1.08999 * 112.85068 * 314.66623 * 15 14 13 17 17 C 1.53783 * 113.61611 * 85.86589 * 15 14 13 18 18 C 1.53956 * 87.02048 * 139.95093 * 17 15 14 19 19 H 1.09001 * 113.73843 * 220.05435 * 18 17 15 20 20 N 1.46502 * 113.53842 * 89.18980 * 18 17 15 21 21 C 1.36874 * 126.39628 * 142.50395 * 20 18 17 22 22 C 1.34671 * 106.81548 * 180.02562 * 21 20 18 23 23 N 1.34129 * 108.01989 * 359.97438 * 22 21 20 24 24 C 1.30496 * 109.25729 * 359.72927 * 23 22 21 25 25 C 1.53776 * 87.10886 * 334.63657 * 18 17 15 26 26 C 1.38173 * 119.97445 * 64.99002 * 4 2 1 27 27 H 0.96706 * 114.00057 * 59.99229 * 1 2 3 28 28 H 1.09004 * 109.46715 * 240.00184 * 2 1 3 29 29 H 1.48495 * 109.99824 * 60.00516 * 3 2 1 30 30 H 1.48498 * 109.99663 * 181.32155 * 3 2 1 31 31 H 1.08008 * 119.94059 * 359.97438 * 5 4 2 32 32 H 1.08004 * 119.97301 * 180.22654 * 6 5 4 33 33 H 1.07998 * 120.02832 * 179.76832 * 7 6 5 34 34 H 1.08999 * 109.46956 * 299.99463 * 10 9 8 35 35 H 1.08998 * 109.47330 * 60.00364 * 10 9 8 36 36 H 0.97003 * 119.99726 * 359.97438 * 13 11 10 37 37 H 1.08994 * 109.47550 * 299.99657 * 14 13 11 38 38 H 1.09001 * 109.47334 * 60.00102 * 14 13 11 39 39 H 1.08997 * 113.61222 * 254.53033 * 17 15 14 40 40 H 1.08994 * 113.61416 * 25.42637 * 17 15 14 41 41 H 1.07998 * 126.59491 * 359.95857 * 21 20 18 42 42 H 1.08006 * 125.99099 * 180.02562 * 22 21 20 43 43 H 1.07996 * 125.65289 * 180.28659 * 24 23 22 44 44 H 1.09001 * 113.61846 * 270.80731 * 25 18 17 45 45 H 1.09003 * 113.61516 * 139.91684 * 25 18 17 46 46 H 1.08001 * 120.02344 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.6437 -0.0131 2.1882 6 6 3.1018 -0.6611 3.3206 7 6 2.8577 -2.0097 3.4925 8 6 2.1475 -2.7131 2.5301 9 8 1.9064 -4.0401 2.6966 10 6 2.4131 -4.6472 3.8869 11 6 2.0522 -6.1103 3.8973 12 8 1.4226 -6.5862 2.9764 13 7 2.4290 -6.8900 4.9300 14 6 2.0777 -8.3122 4.9404 15 6 2.6203 -8.9622 6.2148 16 1 3.6490 -8.6743 6.4319 17 6 1.6766 -8.8331 7.4222 18 6 2.0615 -10.2812 7.7759 19 1 1.2246 -10.8840 8.1286 20 7 3.2382 -10.3787 8.6432 21 6 3.4268 -11.2775 9.6581 22 6 4.6356 -11.0155 10.1908 23 7 5.1706 -9.9852 9.5190 24 6 4.3418 -9.6025 8.5865 25 6 2.3776 -10.4792 6.2840 26 6 1.6844 -2.0597 1.3976 27 1 -0.3933 0.4418 -0.7650 28 1 1.7923 -0.5138 -0.8901 29 1 1.5617 2.4678 1.2085 30 1 3.5346 1.7701 -0.0322 31 1 2.8398 1.0404 2.0533 32 1 3.6550 -0.1133 4.0692 33 1 3.2189 -2.5162 4.3753 34 1 3.4975 -4.5407 3.9157 35 1 1.9766 -4.1587 4.7580 36 1 2.9329 -6.5095 5.6664 37 1 0.9934 -8.4188 4.9121 38 1 2.5138 -8.8006 4.0690 39 1 2.0072 -8.1003 8.1582 40 1 0.6288 -8.7146 7.1466 41 1 2.7382 -12.0479 9.9721 42 1 5.0943 -11.5432 11.0140 43 1 4.5093 -8.7966 7.8874 44 1 1.5217 -10.8117 5.6966 45 1 3.2732 -11.0734 6.1026 46 1 1.1319 -2.6050 0.6468 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:33:27 Heat of formation + Delta-G solvation = 31.714338 kcal Electronic energy + Delta-G solvation = -28278.089462 eV Core-core repulsion = 24137.522214 eV Total energy + Delta-G solvation = -4140.567248 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.30614 -41.58859 -40.81846 -39.98971 -38.84769 -37.28921 -35.87016 -33.44007 -32.63983 -31.86108 -30.46643 -30.12747 -28.27686 -27.21457 -26.75941 -24.84129 -23.72718 -22.56641 -22.48508 -21.90288 -21.52207 -20.98368 -19.19622 -18.50947 -18.41295 -17.98107 -17.62160 -17.58269 -17.10699 -16.84295 -16.58182 -16.13752 -16.03991 -15.85662 -15.59095 -15.27188 -14.92914 -14.83778 -14.68182 -14.58060 -14.41381 -14.24906 -13.86495 -13.78574 -13.74718 -13.64706 -13.31883 -13.17961 -12.38655 -12.33836 -12.22710 -12.11368 -12.03913 -11.89708 -11.81068 -10.98904 -10.91026 -10.58907 -10.39137 -10.32699 -9.93686 -9.49911 -9.31416 -4.98259 0.15341 0.35115 1.02395 1.21915 1.38226 1.40390 1.62558 1.63107 1.95610 2.23731 2.44138 2.59181 2.90162 3.03515 3.25431 3.32712 3.36276 3.42511 3.55517 3.69017 3.76423 3.80239 3.82048 3.84372 3.93218 3.94239 3.96131 4.15396 4.20060 4.21064 4.28340 4.38855 4.46374 4.48239 4.49084 4.55157 4.57574 4.63849 4.75307 4.89166 4.92313 5.13487 5.17271 5.26963 5.28541 5.39621 5.58244 5.77396 6.13363 6.17486 6.29990 6.60982 6.98548 7.11524 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.688 3.312 4 C -0.035 4.035 5 C -0.160 4.160 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.511 6.511 13 N -0.728 5.728 14 C 0.132 3.868 15 C -0.132 4.132 16 H 0.102 0.898 17 C -0.139 4.139 18 C 0.104 3.896 19 H 0.115 0.885 20 N -0.442 5.442 21 C -0.052 4.052 22 C -0.029 4.029 23 N -0.492 5.492 24 C 0.176 3.824 25 C -0.134 4.134 26 C -0.117 4.117 27 H 0.383 0.617 28 H 0.077 0.923 29 H -0.250 1.250 30 H -0.254 1.254 31 H 0.121 0.879 32 H 0.131 0.869 33 H 0.132 0.868 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.076 0.924 38 H 0.075 0.925 39 H 0.082 0.918 40 H 0.107 0.893 41 H 0.175 0.825 42 H 0.171 0.829 43 H 0.201 0.799 44 H 0.108 0.892 45 H 0.083 0.917 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.099 1.009 0.060 1.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.200 6.200 10 C -0.039 4.039 11 C 0.300 3.700 12 O -0.384 6.384 13 N -0.382 5.382 14 C 0.009 3.991 15 C -0.150 4.150 16 H 0.120 0.880 17 C -0.177 4.177 18 C 0.000 4.000 19 H 0.133 0.867 20 N -0.126 5.126 21 C -0.185 4.185 22 C -0.177 4.177 23 N -0.210 5.210 24 C -0.106 4.106 25 C -0.173 4.173 26 C -0.136 4.136 27 H 0.231 0.769 28 H 0.095 0.905 29 H -0.175 1.175 30 H -0.179 1.179 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.237 0.763 37 H 0.094 0.906 38 H 0.094 0.906 39 H 0.101 0.899 40 H 0.126 0.874 41 H 0.192 0.808 42 H 0.188 0.812 43 H 0.217 0.783 44 H 0.126 0.874 45 H 0.102 0.898 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.454 1.151 0.303 1.274 hybrid contribution -0.306 -0.746 0.711 1.075 sum -0.761 0.405 1.014 1.330 Atomic orbital electron populations 1.86506 1.16952 1.81867 1.49706 1.24741 0.85962 1.10563 0.97247 0.95285 0.80696 0.77824 0.87244 1.19134 0.96703 0.92918 0.94730 1.20829 1.02336 0.99273 0.95338 1.20858 0.97618 0.93723 0.96716 1.21277 1.04810 0.95887 1.00480 1.19001 0.95276 0.82441 0.94753 1.86166 1.73765 1.19985 1.40047 1.22465 1.00724 0.91844 0.88857 1.20024 0.79922 0.87495 0.82514 1.90801 1.37912 1.74759 1.34936 1.45773 1.58786 1.10163 1.23518 1.21378 1.00749 0.79472 0.97482 1.23065 1.00378 0.96702 0.94858 0.87997 1.23536 1.01312 0.95220 0.97642 1.22353 0.87090 0.99768 0.90764 0.86656 1.45283 1.15114 1.26323 1.25852 1.22787 1.01565 0.99416 0.94690 1.22381 0.93888 0.98380 1.03043 1.70344 1.29974 1.13365 1.07342 1.24991 0.84088 0.99987 1.01518 1.23364 1.04079 0.95509 0.94305 1.20251 1.02461 0.93535 0.97310 0.76892 0.90486 1.17508 1.17924 0.86172 0.85073 0.85048 0.88687 0.88699 0.76305 0.90614 0.90637 0.89941 0.87426 0.80780 0.81187 0.78303 0.87365 0.89804 0.84428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.81 -35.23 -0.45 -0.92 16 2 C -0.07 -0.04 2.79 36.00 0.10 0.06 16 3 Si 0.69 -0.61 29.84 -169.99 -5.07 -5.68 16 4 C -0.03 -0.10 5.38 -104.65 -0.56 -0.67 16 5 C -0.16 -0.40 8.67 -39.56 -0.34 -0.74 16 6 C -0.07 -0.08 10.04 -39.61 -0.40 -0.48 16 7 C -0.21 -0.19 9.04 -39.43 -0.36 -0.54 16 8 C 0.13 0.39 6.69 -39.22 -0.26 0.13 16 9 O -0.29 -0.99 9.67 -39.33 -0.38 -1.37 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 11 C 0.52 0.46 7.91 -10.98 -0.09 0.38 16 12 O -0.51 -3.09 16.50 -14.36 -0.24 -3.33 16 13 N -0.73 2.08 5.56 -60.29 -0.33 1.74 16 14 C 0.13 -0.39 5.50 -4.04 -0.02 -0.41 16 15 C -0.13 0.63 3.24 -89.80 -0.29 0.34 16 16 H 0.10 -0.52 5.63 -51.93 -0.29 -0.81 16 17 C -0.14 0.67 7.07 -25.83 -0.18 0.49 16 18 C 0.10 -0.39 4.88 -67.03 -0.33 -0.72 16 19 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 20 N -0.44 0.43 2.94 -110.50 -0.33 0.10 16 21 C -0.05 0.00 11.58 -16.56 -0.19 -0.19 16 22 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 23 N -0.49 -1.81 11.25 -14.66 -0.16 -1.97 16 24 C 0.18 0.08 11.20 -90.38 -1.01 -0.93 16 25 C -0.13 0.58 7.35 -25.92 -0.19 0.39 16 26 C -0.12 -0.43 9.62 -39.43 -0.38 -0.81 16 27 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 28 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 29 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 30 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 31 H 0.12 0.22 4.86 -52.48 -0.26 -0.04 16 32 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 33 H 0.13 -0.29 6.30 -52.49 -0.33 -0.62 16 34 H 0.10 -0.32 7.66 -51.93 -0.40 -0.72 16 35 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 36 H 0.40 -2.37 8.47 -40.82 -0.35 -2.72 16 37 H 0.08 -0.16 7.87 -51.93 -0.41 -0.57 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.08 -0.35 8.03 -51.93 -0.42 -0.76 16 40 H 0.11 -0.57 7.92 -51.93 -0.41 -0.98 16 41 H 0.17 -0.49 8.06 -52.49 -0.42 -0.91 16 42 H 0.17 0.03 8.06 -52.48 -0.42 -0.39 16 43 H 0.20 -0.52 5.85 -52.49 -0.31 -0.83 16 44 H 0.11 -0.57 8.10 -51.93 -0.42 -0.99 16 45 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 46 H 0.14 0.49 8.06 -52.49 -0.42 0.06 16 LS Contribution 382.49 15.07 5.76 5.76 Total: 0.00 -13.24 382.49 -11.89 -25.13 By element: Atomic # 1 Polarization: -9.49 SS G_CDS: -6.16 Total: -15.65 kcal Atomic # 6 Polarization: 0.71 SS G_CDS: -4.53 Total: -3.82 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.83 Total: -0.12 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -1.07 Total: -5.62 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -13.24 -11.89 -25.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.849 kcal (2) G-P(sol) polarization free energy of solvation -13.244 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.135 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds