Wall clock time and date at job start Sun Mar 7 2021 13:33:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50695 * 109.47325 * 120.00585 * 2 1 3 5 5 C 1.38245 * 119.97401 * 244.72355 * 4 2 1 6 6 C 1.38284 * 120.11455 * 179.76237 * 5 4 2 7 7 C 1.38127 * 120.05563 * 0.50958 * 6 5 4 8 8 C 1.38755 * 119.94014 * 359.74295 * 7 6 5 9 9 O 1.35898 * 120.04997 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00292 * 0.02562 * 9 8 7 11 11 C 1.50703 * 109.47090 * 180.02562 * 10 9 8 12 12 O 1.21287 * 119.99971 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00146 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99985 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.46842 * 180.02562 * 14 13 11 16 16 H 1.08999 * 112.85068 * 314.66623 * 15 14 13 17 17 C 1.53783 * 113.61611 * 85.86589 * 15 14 13 18 18 C 1.53956 * 87.02048 * 139.95093 * 17 15 14 19 19 H 1.09001 * 113.73843 * 220.05435 * 18 17 15 20 20 N 1.46502 * 113.53842 * 89.18980 * 18 17 15 21 21 C 1.36874 * 126.39628 * 142.50395 * 20 18 17 22 22 C 1.34671 * 106.81548 * 180.02562 * 21 20 18 23 23 N 1.34129 * 108.01989 * 359.97438 * 22 21 20 24 24 C 1.30496 * 109.25729 * 359.72927 * 23 22 21 25 25 C 1.53776 * 87.10886 * 334.63657 * 18 17 15 26 26 C 1.38173 * 119.97445 * 64.99002 * 4 2 1 27 27 H 0.96706 * 114.00057 * 59.99229 * 1 2 3 28 28 H 1.09004 * 109.46715 * 240.00184 * 2 1 3 29 29 H 1.48495 * 109.99824 * 60.00516 * 3 2 1 30 30 H 1.48498 * 109.99663 * 181.32155 * 3 2 1 31 31 H 1.08008 * 119.94059 * 359.97438 * 5 4 2 32 32 H 1.08004 * 119.97301 * 180.22654 * 6 5 4 33 33 H 1.07998 * 120.02832 * 179.76832 * 7 6 5 34 34 H 1.08999 * 109.46956 * 299.99463 * 10 9 8 35 35 H 1.08998 * 109.47330 * 60.00364 * 10 9 8 36 36 H 0.97003 * 119.99726 * 359.97438 * 13 11 10 37 37 H 1.08994 * 109.47550 * 299.99657 * 14 13 11 38 38 H 1.09001 * 109.47334 * 60.00102 * 14 13 11 39 39 H 1.08997 * 113.61222 * 254.53033 * 17 15 14 40 40 H 1.08994 * 113.61416 * 25.42637 * 17 15 14 41 41 H 1.07998 * 126.59491 * 359.95857 * 21 20 18 42 42 H 1.08006 * 125.99099 * 180.02562 * 22 21 20 43 43 H 1.07996 * 125.65289 * 180.28659 * 24 23 22 44 44 H 1.09001 * 113.61846 * 270.80731 * 25 18 17 45 45 H 1.09003 * 113.61516 * 139.91684 * 25 18 17 46 46 H 1.08001 * 120.02344 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.6437 -0.0131 2.1882 6 6 3.1018 -0.6611 3.3206 7 6 2.8577 -2.0097 3.4925 8 6 2.1475 -2.7131 2.5301 9 8 1.9064 -4.0401 2.6966 10 6 2.4131 -4.6472 3.8869 11 6 2.0522 -6.1103 3.8973 12 8 1.4226 -6.5862 2.9764 13 7 2.4290 -6.8900 4.9300 14 6 2.0777 -8.3122 4.9404 15 6 2.6203 -8.9622 6.2148 16 1 3.6490 -8.6743 6.4319 17 6 1.6766 -8.8331 7.4222 18 6 2.0615 -10.2812 7.7759 19 1 1.2246 -10.8840 8.1286 20 7 3.2382 -10.3787 8.6432 21 6 3.4268 -11.2775 9.6581 22 6 4.6356 -11.0155 10.1908 23 7 5.1706 -9.9852 9.5190 24 6 4.3418 -9.6025 8.5865 25 6 2.3776 -10.4792 6.2840 26 6 1.6844 -2.0597 1.3976 27 1 -0.3933 0.4418 -0.7650 28 1 1.7923 -0.5138 -0.8901 29 1 1.5617 2.4678 1.2085 30 1 3.5346 1.7701 -0.0322 31 1 2.8398 1.0404 2.0533 32 1 3.6550 -0.1133 4.0692 33 1 3.2189 -2.5162 4.3753 34 1 3.4975 -4.5407 3.9157 35 1 1.9766 -4.1587 4.7580 36 1 2.9329 -6.5095 5.6664 37 1 0.9934 -8.4188 4.9121 38 1 2.5138 -8.8006 4.0690 39 1 2.0072 -8.1003 8.1582 40 1 0.6288 -8.7146 7.1466 41 1 2.7382 -12.0479 9.9721 42 1 5.0943 -11.5432 11.0140 43 1 4.5093 -8.7966 7.8874 44 1 1.5217 -10.8117 5.6966 45 1 3.2732 -11.0734 6.1026 46 1 1.1319 -2.6050 0.6468 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946168_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:33:25 Heat of formation + Delta-G solvation = 29.375098 kcal Electronic energy + Delta-G solvation = -28278.190899 eV Core-core repulsion = 24137.522214 eV Total energy + Delta-G solvation = -4140.668685 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.22536 -41.64978 -40.79198 -39.86674 -38.91363 -37.31831 -35.85137 -33.38449 -32.70510 -31.90802 -30.45011 -30.09505 -28.14719 -26.87732 -26.77873 -24.68286 -23.82782 -22.59111 -22.42355 -21.83021 -21.49148 -20.80704 -19.22481 -18.48453 -18.40417 -17.75814 -17.69257 -17.56095 -17.14749 -16.80730 -16.42219 -16.02783 -15.93045 -15.87698 -15.58017 -15.23709 -14.91555 -14.80720 -14.63908 -14.58334 -14.39844 -14.31568 -13.84802 -13.70899 -13.56833 -13.48286 -13.28047 -13.09361 -12.45436 -12.28738 -12.17126 -12.03254 -11.88341 -11.76223 -11.63097 -11.06722 -10.92272 -10.52861 -10.40278 -10.25263 -10.01646 -9.49012 -9.43564 -4.93496 0.05967 0.21828 1.08307 1.24884 1.38420 1.43686 1.65213 1.78816 1.95784 2.19057 2.48437 2.51845 3.20793 3.31179 3.38814 3.51640 3.57908 3.65535 3.70107 3.73643 3.79538 3.85183 3.95939 3.96672 4.01329 4.14162 4.17904 4.21233 4.22668 4.38110 4.47399 4.55467 4.56434 4.64623 4.68973 4.73421 4.79002 4.83857 4.88628 4.92537 5.06923 5.17502 5.18138 5.28615 5.30629 5.35281 5.51943 5.79779 6.15952 6.27881 6.38969 6.87064 7.05921 7.12026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.090 4.090 3 Si 0.787 3.213 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.072 4.072 7 C -0.201 4.201 8 C 0.121 3.879 9 O -0.318 6.318 10 C 0.034 3.966 11 C 0.513 3.487 12 O -0.573 6.573 13 N -0.707 5.707 14 C 0.133 3.867 15 C -0.120 4.120 16 H 0.109 0.891 17 C -0.130 4.130 18 C 0.098 3.902 19 H 0.130 0.870 20 N -0.439 5.439 21 C -0.048 4.048 22 C -0.063 4.063 23 N -0.541 5.541 24 C 0.173 3.827 25 C -0.131 4.131 26 C -0.144 4.144 27 H 0.404 0.596 28 H 0.090 0.910 29 H -0.292 1.292 30 H -0.285 1.285 31 H 0.122 0.878 32 H 0.158 0.842 33 H 0.167 0.833 34 H 0.126 0.874 35 H 0.125 0.875 36 H 0.421 0.579 37 H 0.070 0.930 38 H 0.061 0.939 39 H 0.082 0.918 40 H 0.117 0.883 41 H 0.200 0.800 42 H 0.174 0.826 43 H 0.224 0.776 44 H 0.119 0.881 45 H 0.071 0.929 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.100 1.438 0.963 2.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.199 4.199 3 Si 0.692 3.308 4 C -0.052 4.052 5 C -0.198 4.198 6 C -0.090 4.090 7 C -0.220 4.220 8 C 0.075 3.925 9 O -0.231 6.231 10 C -0.044 4.044 11 C 0.299 3.701 12 O -0.452 6.452 13 N -0.362 5.362 14 C 0.010 3.990 15 C -0.138 4.138 16 H 0.127 0.873 17 C -0.167 4.167 18 C -0.005 4.005 19 H 0.148 0.852 20 N -0.121 5.121 21 C -0.181 4.181 22 C -0.210 4.210 23 N -0.260 5.260 24 C -0.109 4.109 25 C -0.169 4.169 26 C -0.163 4.163 27 H 0.255 0.745 28 H 0.108 0.892 29 H -0.220 1.220 30 H -0.213 1.213 31 H 0.139 0.861 32 H 0.176 0.824 33 H 0.185 0.815 34 H 0.143 0.857 35 H 0.143 0.857 36 H 0.258 0.742 37 H 0.088 0.912 38 H 0.079 0.921 39 H 0.101 0.899 40 H 0.135 0.865 41 H 0.217 0.783 42 H 0.192 0.808 43 H 0.240 0.760 44 H 0.137 0.863 45 H 0.090 0.910 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -0.459 1.566 1.219 2.036 hybrid contribution -0.313 -0.935 0.479 1.096 sum -0.771 0.630 1.697 1.968 Atomic orbital electron populations 1.86452 1.17204 1.82535 1.51339 1.25033 0.85994 1.11921 0.96925 0.94229 0.77277 0.74634 0.84663 1.19490 0.96923 0.92956 0.95868 1.21047 1.03065 0.99558 0.96172 1.21251 0.97006 0.94094 0.96638 1.21618 1.03675 0.95762 1.00897 1.19166 0.95655 0.82535 0.95100 1.86125 1.74489 1.20308 1.42165 1.22786 1.02640 0.90456 0.88490 1.20450 0.79025 0.88439 0.82210 1.90775 1.41022 1.75961 1.37403 1.45655 1.57581 1.09975 1.22968 1.21370 1.00432 0.79336 0.97900 1.22985 1.00697 0.96260 0.93882 0.87305 1.23505 1.01716 0.94394 0.97126 1.22581 0.86452 1.00907 0.90534 0.85233 1.45444 1.15445 1.25557 1.25668 1.23173 1.01161 0.99527 0.94220 1.22652 0.95205 0.99047 1.04102 1.70276 1.31895 1.14774 1.09053 1.25427 0.84033 1.00337 1.01124 1.23364 1.04015 0.95478 0.94070 1.20347 1.03740 0.94155 0.98060 0.74497 0.89199 1.22018 1.21262 0.86082 0.82395 0.81545 0.85667 0.85720 0.74163 0.91187 0.92101 0.89915 0.86515 0.78310 0.80848 0.75963 0.86308 0.90992 0.85743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.44 12.81 -148.98 -1.91 -3.35 16 2 C -0.09 -0.17 2.79 71.23 0.20 0.03 16 3 Si 0.79 -1.11 29.84 68.60 2.05 0.94 16 4 C -0.05 -0.38 5.38 -19.88 -0.11 -0.48 16 5 C -0.18 -0.99 8.67 22.28 0.19 -0.80 16 6 C -0.07 -0.10 10.04 22.25 0.22 0.12 16 7 C -0.20 -0.11 9.04 22.37 0.20 0.09 16 8 C 0.12 0.79 6.69 22.51 0.15 0.94 16 9 O -0.32 -2.42 9.67 -73.36 -0.71 -3.13 16 10 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 11 C 0.51 0.91 7.91 87.66 0.69 1.60 16 12 O -0.57 -7.88 16.50 15.99 0.26 -7.62 16 13 N -0.71 4.74 5.56 -463.06 -2.57 2.17 16 14 C 0.13 -0.83 5.50 86.38 0.48 -0.35 16 15 C -0.12 1.30 3.24 -10.27 -0.03 1.26 16 16 H 0.11 -1.30 5.63 -2.39 -0.01 -1.32 16 17 C -0.13 1.48 7.07 31.18 0.22 1.70 16 18 C 0.10 -0.89 4.88 45.58 0.22 -0.67 16 19 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 20 N -0.44 1.24 2.94 -503.51 -1.48 -0.24 16 21 C -0.05 0.03 11.58 83.09 0.96 0.99 16 22 C -0.06 -0.30 11.87 83.52 0.99 0.69 16 23 N -0.54 -4.33 11.25 -200.31 -2.25 -6.59 16 24 C 0.17 0.08 11.20 180.26 2.02 2.10 16 25 C -0.13 1.27 7.35 31.12 0.23 1.50 16 26 C -0.14 -1.32 9.62 22.37 0.22 -1.11 16 27 H 0.40 -3.44 8.74 -74.05 -0.65 -4.08 16 28 H 0.09 -0.13 7.96 -2.38 -0.02 -0.15 16 29 H -0.29 -1.58 7.05 99.48 0.70 -0.88 16 30 H -0.29 -1.00 7.11 99.48 0.71 -0.29 16 31 H 0.12 0.52 4.86 -2.91 -0.01 0.51 16 32 H 0.16 -0.73 8.06 -2.91 -0.02 -0.76 16 33 H 0.17 -1.26 6.30 -2.91 -0.02 -1.28 16 34 H 0.13 -1.15 7.66 -2.39 -0.02 -1.16 16 35 H 0.13 -1.13 7.66 -2.39 -0.02 -1.15 16 36 H 0.42 -5.87 8.47 -92.71 -0.79 -6.66 16 37 H 0.07 -0.31 7.87 -2.39 -0.02 -0.33 16 38 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 39 H 0.08 -0.87 8.03 -2.39 -0.02 -0.89 16 40 H 0.12 -1.47 7.92 -2.39 -0.02 -1.49 16 41 H 0.20 -1.36 8.06 -2.91 -0.02 -1.38 16 42 H 0.17 0.32 8.06 -2.91 -0.02 0.30 16 43 H 0.22 -1.43 5.85 -2.91 -0.02 -1.45 16 44 H 0.12 -1.37 8.10 -2.39 -0.02 -1.39 16 45 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 46 H 0.12 1.28 8.06 -2.91 -0.02 1.26 16 Total: 0.00 -34.92 382.49 0.24 -34.68 By element: Atomic # 1 Polarization: -24.39 SS G_CDS: -0.37 Total: -24.76 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: 7.23 Total: 7.89 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -6.31 Total: -4.66 kcal Atomic # 8 Polarization: -11.74 SS G_CDS: -2.35 Total: -14.10 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: 2.05 Total: 0.94 kcal Total: -34.92 0.24 -34.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.059 kcal (2) G-P(sol) polarization free energy of solvation -34.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds