Wall clock time and date at job start Sun Mar 7 2021 13:33:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35982 * 117.00397 * 2 1 4 4 C 1.38678 * 120.00060 * 179.97438 * 3 2 1 5 5 C 1.38153 * 119.99777 * 180.02562 * 4 3 2 6 6 C 1.50694 * 120.00034 * 179.97438 * 5 4 3 7 7 O 1.42906 * 109.46763 * 105.02100 * 6 5 4 8 8 Si 1.86302 * 109.47051 * 345.02806 * 6 5 4 9 9 C 1.38682 * 119.99796 * 0.02562 * 5 4 3 10 10 O 1.35985 * 119.99334 * 180.02562 * 9 5 4 11 11 C 1.42905 * 116.99487 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.46792 * 179.97438 * 11 10 9 13 13 O 1.21277 * 119.99950 * 0.02562 * 12 11 10 14 14 N 1.34776 * 119.99507 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99882 * 180.02562 * 14 12 11 16 16 C 1.52996 * 109.47563 * 179.97438 * 15 14 12 17 17 H 1.09008 * 112.84785 * 43.80008 * 16 15 14 18 18 C 1.53773 * 113.61922 * 174.99870 * 16 15 14 19 19 C 1.53784 * 87.08505 * 140.06343 * 18 16 15 20 20 H 1.08994 * 113.61753 * 219.93444 * 19 18 16 21 21 N 1.46507 * 113.61020 * 89.11815 * 19 18 16 22 22 C 1.36878 * 126.39829 * 120.00745 * 21 19 18 23 23 C 1.34666 * 106.81597 * 180.23772 * 22 21 19 24 24 N 1.34129 * 108.02165 * 359.60606 * 23 22 21 25 25 C 1.30498 * 109.25671 * 0.40230 * 24 23 22 26 26 C 1.53779 * 87.08031 * 334.56889 * 19 18 16 27 27 C 1.38718 * 120.00110 * 0.27373 * 9 5 4 28 28 C 1.38105 * 119.99734 * 359.44646 * 27 9 5 29 29 H 1.08996 * 109.47257 * 299.99501 * 1 2 3 30 30 H 1.09000 * 109.47144 * 59.99613 * 1 2 3 31 31 H 1.09000 * 109.47735 * 179.97438 * 1 2 3 32 32 H 1.07998 * 120.00256 * 0.05084 * 4 3 2 33 33 H 1.08999 * 109.47561 * 225.02614 * 6 5 4 34 34 H 0.96708 * 113.99702 * 60.00550 * 7 6 5 35 35 H 1.48495 * 109.99996 * 299.99204 * 8 6 5 36 36 H 1.48501 * 110.00211 * 61.31601 * 8 6 5 37 37 H 1.09000 * 109.46958 * 60.00050 * 11 10 9 38 38 H 1.09002 * 109.47186 * 299.99968 * 11 10 9 39 39 H 0.97001 * 120.00484 * 359.97438 * 14 12 11 40 40 H 1.09000 * 109.47235 * 59.99812 * 15 14 12 41 41 H 1.09002 * 109.46947 * 299.99707 * 15 14 12 42 42 H 1.08999 * 113.61454 * 25.51689 * 18 16 15 43 43 H 1.09003 * 113.61492 * 254.61287 * 18 16 15 44 44 H 1.08002 * 126.58785 * 359.96564 * 22 21 19 45 45 H 1.08003 * 125.98708 * 179.75770 * 23 22 21 46 46 H 1.07999 * 125.64986 * 179.77507 * 25 24 23 47 47 H 1.09000 * 113.61788 * 139.97555 * 26 19 18 48 48 H 1.08997 * 113.61488 * 270.88287 * 26 19 18 49 49 H 1.08003 * 119.99833 * 179.70645 * 27 9 5 50 50 H 1.08001 * 119.99825 * 180.25170 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 0.0005 5 6 4.0585 2.5150 0.0011 6 6 5.5634 2.5938 0.0022 7 8 6.0217 2.9675 -1.2987 8 14 6.2719 0.9318 0.4565 9 6 3.3032 3.6781 0.0016 10 8 3.9206 4.8897 0.0016 11 6 3.0807 6.0458 0.0016 12 6 3.9350 7.2873 0.0022 13 8 5.1440 7.1914 0.0022 14 7 3.3554 8.5040 0.0029 15 6 4.1857 9.7110 0.0029 16 6 3.2866 10.9488 0.0031 17 1 2.4512 10.8651 0.6984 18 6 4.0600 12.2721 0.1259 19 6 3.0758 12.8521 -0.9035 20 1 3.5461 13.5081 -1.6360 21 7 1.8757 13.4391 -0.3020 22 6 1.4632 14.7393 -0.4153 23 6 0.3232 14.8495 0.2930 24 7 0.0424 13.6472 0.8171 25 6 0.9698 12.7981 0.4675 26 6 2.8729 11.4122 -1.4038 27 6 1.9179 3.6055 0.0073 28 6 1.2909 2.3750 0.0010 29 1 -0.3633 0.5137 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 4.0195 0.3783 0.0001 33 1 5.8877 3.3381 0.7295 34 1 5.6913 3.8247 -1.6009 35 1 5.8028 0.5317 1.8074 36 1 5.8632 -0.0856 -0.5451 37 1 2.4514 6.0377 0.8916 38 1 2.4514 6.0377 -0.8884 39 1 2.3884 8.5807 0.0025 40 1 4.8147 9.7193 -0.8873 41 1 4.8153 9.7187 0.8927 42 1 5.0864 12.2133 -0.2363 43 1 3.9835 12.7328 1.1109 44 1 1.9594 15.5266 -0.9634 45 1 -0.2636 15.7479 0.4153 46 1 1.0064 11.7556 0.7471 47 1 1.8380 11.1785 -1.6538 48 1 3.5747 11.1182 -2.1842 49 1 1.3297 4.5113 0.0126 50 1 0.2124 2.3185 0.0013 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946168_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:33:29 Heat of formation + Delta-G solvation = -7.026589 kcal Electronic energy + Delta-G solvation = -33111.544856 eV Core-core repulsion = 28495.077864 eV Total energy + Delta-G solvation = -4616.466992 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.21487 -41.91838 -40.99417 -40.16108 -39.63154 -38.16257 -37.00963 -35.80063 -33.36455 -32.92998 -31.33830 -30.39728 -30.07374 -28.35459 -27.88735 -26.84140 -26.64513 -24.78289 -23.71403 -22.50637 -22.42338 -21.83728 -21.59201 -20.79181 -19.62997 -18.90244 -18.62717 -18.11526 -17.75868 -17.56411 -17.47872 -17.07265 -16.77220 -16.40172 -16.12768 -16.03023 -15.93541 -15.77171 -15.56758 -15.35373 -15.20394 -14.87575 -14.70678 -14.54721 -14.32865 -14.14466 -13.97591 -13.65908 -13.56249 -13.49692 -13.45885 -13.12574 -13.07618 -12.58248 -12.36948 -12.23484 -12.00904 -11.76416 -11.60826 -11.55023 -11.29552 -11.12866 -11.00397 -10.90226 -10.51561 -10.25305 -10.19630 -9.48199 -8.94748 -4.87499 -0.08238 0.20119 1.09377 1.31382 1.42361 1.44846 1.58769 1.80018 1.89231 2.19911 2.21531 2.41269 2.53424 3.23272 3.33067 3.42744 3.50496 3.59109 3.64378 3.68896 3.72297 3.82693 3.92460 3.97599 3.97836 4.02847 4.06080 4.11702 4.23299 4.24581 4.26642 4.32237 4.32891 4.49891 4.55599 4.58097 4.66304 4.66830 4.71357 4.76532 4.80314 4.86582 4.90774 4.94757 4.99599 5.06452 5.20370 5.27964 5.33399 5.37910 5.80564 6.04842 6.29028 6.29404 6.43049 6.54166 7.11199 7.12922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.088 3.912 4 C -0.142 4.142 5 C -0.118 4.118 6 C -0.084 4.084 7 O -0.544 6.544 8 Si 0.811 3.189 9 C 0.098 3.902 10 O -0.309 6.309 11 C 0.034 3.966 12 C 0.513 3.487 13 O -0.568 6.568 14 N -0.709 5.709 15 C 0.134 3.866 16 C -0.120 4.120 17 H 0.108 0.892 18 C -0.131 4.131 19 C 0.097 3.903 20 H 0.129 0.871 21 N -0.439 5.439 22 C -0.048 4.048 23 C -0.064 4.064 24 N -0.542 5.542 25 C 0.174 3.826 26 C -0.129 4.129 27 C -0.154 4.154 28 C -0.159 4.159 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.114 0.886 32 H 0.124 0.876 33 H 0.079 0.921 34 H 0.372 0.628 35 H -0.268 1.268 36 H -0.287 1.287 37 H 0.123 0.877 38 H 0.126 0.874 39 H 0.420 0.580 40 H 0.071 0.929 41 H 0.060 0.940 42 H 0.119 0.881 43 H 0.070 0.930 44 H 0.200 0.800 45 H 0.174 0.826 46 H 0.225 0.775 47 H 0.082 0.918 48 H 0.117 0.883 49 H 0.175 0.825 50 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.331 3.918 -1.820 5.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.043 3.957 4 C -0.161 4.161 5 C -0.120 4.120 6 C -0.192 4.192 7 O -0.350 6.350 8 Si 0.713 3.287 9 C 0.053 3.947 10 O -0.223 6.223 11 C -0.044 4.044 12 C 0.299 3.701 13 O -0.446 6.446 14 N -0.364 5.364 15 C 0.011 3.989 16 C -0.138 4.138 17 H 0.126 0.874 18 C -0.170 4.170 19 C -0.006 4.006 20 H 0.147 0.853 21 N -0.121 5.121 22 C -0.181 4.181 23 C -0.210 4.210 24 N -0.260 5.260 25 C -0.109 4.109 26 C -0.167 4.167 27 C -0.173 4.173 28 C -0.178 4.178 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.132 0.868 32 H 0.141 0.859 33 H 0.097 0.903 34 H 0.221 0.779 35 H -0.194 1.194 36 H -0.215 1.215 37 H 0.140 0.860 38 H 0.143 0.857 39 H 0.257 0.743 40 H 0.089 0.911 41 H 0.079 0.921 42 H 0.137 0.863 43 H 0.089 0.911 44 H 0.216 0.784 45 H 0.191 0.809 46 H 0.241 0.759 47 H 0.100 0.900 48 H 0.136 0.864 49 H 0.192 0.808 50 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -2.614 2.116 -1.145 3.553 hybrid contribution -1.541 1.409 -0.553 2.160 sum -4.155 3.525 -1.698 5.708 Atomic orbital electron populations 1.23384 0.75983 1.05720 1.02619 1.86078 1.23851 1.26694 1.89016 1.18994 0.91723 0.85626 0.99392 1.20159 0.92848 0.96917 1.06152 1.19558 0.96857 0.90569 1.04977 1.25354 0.91067 1.14119 0.88617 1.86658 1.73870 1.42286 1.32211 0.92511 0.89989 0.69899 0.76340 1.18680 0.91510 0.84327 1.00191 1.86092 1.35321 1.11626 1.89231 1.22776 0.92815 0.81966 1.06832 1.20404 0.88255 0.85385 0.76025 1.90782 1.16536 1.87359 1.49937 1.45668 1.11563 1.04279 1.74861 1.21347 0.93143 0.82090 1.02345 1.22978 0.99165 0.93101 0.98551 0.87367 1.23370 0.99641 0.94400 0.99561 1.22555 0.84018 0.96926 0.97081 0.85323 1.45449 1.19972 1.08909 1.37797 1.23169 0.99841 0.87770 1.07325 1.22644 0.98780 0.96967 1.02637 1.70276 1.27514 1.02456 1.25799 1.25432 0.87593 1.00774 0.97054 1.23478 1.04052 0.91977 0.97177 1.21464 0.92183 0.99989 1.03634 1.21433 1.01669 0.90732 1.03938 0.91157 0.91216 0.86754 0.85897 0.90278 0.77932 1.19355 1.21456 0.85977 0.85661 0.74281 0.91107 0.92127 0.86291 0.91100 0.78352 0.80897 0.75897 0.89962 0.86442 0.80801 0.81751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.12 10.50 -93.35 -0.98 -3.10 16 3 C 0.09 0.56 6.69 22.49 0.15 0.71 16 4 C -0.14 -1.35 8.59 22.35 0.19 -1.16 16 5 C -0.12 -0.94 5.27 -19.78 -0.10 -1.05 16 6 C -0.08 -0.63 2.33 71.23 0.17 -0.46 16 7 O -0.54 -4.91 12.65 -148.98 -1.89 -6.79 16 8 Si 0.81 4.31 30.40 68.60 2.09 6.39 16 9 C 0.10 0.35 6.62 22.49 0.15 0.50 16 10 O -0.31 -0.89 8.56 -74.34 -0.64 -1.53 16 11 C 0.03 -0.21 5.22 71.24 0.37 0.16 16 12 C 0.51 -0.76 7.91 87.66 0.69 -0.06 16 13 O -0.57 -5.62 16.50 16.02 0.26 -5.35 16 14 N -0.71 6.38 5.56 -463.07 -2.57 3.81 16 15 C 0.13 -1.08 5.51 86.38 0.48 -0.60 16 16 C -0.12 1.45 3.25 -10.27 -0.03 1.42 16 17 H 0.11 -1.43 5.64 -2.38 -0.01 -1.44 16 18 C -0.13 1.40 7.35 31.12 0.23 1.63 16 19 C 0.10 -0.96 4.88 45.52 0.22 -0.74 16 20 H 0.13 -1.57 8.14 -2.39 -0.02 -1.59 16 21 N -0.44 1.56 2.94 -503.80 -1.48 0.08 16 22 C -0.05 0.06 11.58 83.09 0.96 1.02 16 23 C -0.06 -0.27 11.87 83.52 0.99 0.72 16 24 N -0.54 -3.97 11.25 -200.31 -2.25 -6.22 16 25 C 0.17 -0.06 11.19 180.26 2.02 1.96 16 26 C -0.13 1.62 7.06 31.12 0.22 1.84 16 27 C -0.15 0.32 9.03 22.35 0.20 0.52 16 28 C -0.16 0.04 9.03 22.35 0.20 0.24 16 29 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 30 H 0.07 -0.43 7.66 -2.39 -0.02 -0.45 16 31 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 32 H 0.12 1.37 4.93 -2.91 -0.01 1.35 16 33 H 0.08 0.55 7.82 -2.39 -0.02 0.53 16 34 H 0.37 2.27 8.60 -74.05 -0.64 1.63 16 35 H -0.27 -2.13 7.11 99.48 0.71 -1.42 16 36 H -0.29 -3.14 6.81 99.48 0.68 -2.47 16 37 H 0.12 -1.47 7.65 -2.39 -0.02 -1.49 16 38 H 0.13 -1.58 7.67 -2.39 -0.02 -1.60 16 39 H 0.42 -6.69 8.47 -92.71 -0.79 -7.48 16 40 H 0.07 -0.45 7.85 -2.39 -0.02 -0.47 16 41 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 42 H 0.12 -1.49 8.10 -2.39 -0.02 -1.51 16 43 H 0.07 -0.52 8.14 -2.39 -0.02 -0.54 16 44 H 0.20 -1.45 8.06 -2.91 -0.02 -1.48 16 45 H 0.17 0.24 8.06 -2.91 -0.02 0.22 16 46 H 0.22 -1.67 5.86 -2.91 -0.02 -1.68 16 47 H 0.08 -0.96 8.02 -2.39 -0.02 -0.98 16 48 H 0.12 -1.63 7.90 -2.39 -0.02 -1.65 16 49 H 0.17 -1.87 6.29 -2.91 -0.02 -1.89 16 50 H 0.17 -1.08 6.29 -2.91 -0.02 -1.10 16 Total: 0.00 -32.33 410.56 0.34 -31.98 By element: Atomic # 1 Polarization: -26.54 SS G_CDS: -0.41 Total: -26.95 kcal Atomic # 6 Polarization: -0.54 SS G_CDS: 8.22 Total: 7.68 kcal Atomic # 7 Polarization: 3.98 SS G_CDS: -6.31 Total: -2.33 kcal Atomic # 8 Polarization: -13.54 SS G_CDS: -3.24 Total: -16.78 kcal Atomic # 14 Polarization: 4.31 SS G_CDS: 2.09 Total: 6.39 kcal Total: -32.33 0.34 -31.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.958 kcal (2) G-P(sol) polarization free energy of solvation -32.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.344 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds