Wall clock time and date at job start Sun Mar 7 2021 13:47:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35725 * 116.99817 * 2 1 4 4 C 1.38684 * 119.85950 * 359.97438 * 3 2 1 5 5 C 1.38443 * 120.03085 * 179.97438 * 4 3 2 6 6 O 1.35652 * 120.12276 * 180.02562 * 5 4 3 7 7 C 1.42904 * 117.00119 * 0.02562 * 6 5 4 8 8 C 1.40300 * 119.75882 * 359.79280 * 5 4 3 9 9 C 1.47302 * 120.13818 * 180.23043 * 8 5 4 10 10 O 1.21619 * 119.99489 * 303.57378 * 9 8 5 11 11 N 1.34775 * 119.99835 * 123.57322 * 9 8 5 12 12 C 1.44756 * 121.25512 * 4.32814 * 11 9 8 13 13 C 1.51438 * 109.29369 * 283.27911 * 12 11 9 14 14 C 1.46875 * 115.13777 * 266.87036 * 13 12 11 15 15 C 1.54353 * 111.74592 * 66.38560 * 14 13 12 16 16 Si 1.85251 * 110.17125 * 289.11636 * 15 14 13 17 17 C 1.86300 * 109.31109 * 321.43960 * 16 15 14 18 18 C 1.86298 * 109.31166 * 202.01930 * 16 15 14 19 19 C 1.48287 * 121.24678 * 184.60070 * 11 9 8 20 20 C 1.39857 * 119.72787 * 0.48556 * 8 5 4 21 21 C 1.37551 * 119.96442 * 359.46547 * 20 8 5 22 22 C 1.50697 * 119.87759 * 180.27810 * 21 20 8 23 23 O 1.42903 * 109.47296 * 255.43553 * 22 21 20 24 24 Si 1.86294 * 109.47414 * 15.44126 * 22 21 20 25 25 H 1.48493 * 109.47308 * 63.73544 * 24 22 21 26 26 H 1.48501 * 109.47034 * 183.73759 * 24 22 21 27 27 H 1.48501 * 109.47110 * 303.73593 * 24 22 21 28 28 H 1.09002 * 109.47459 * 300.00015 * 1 2 3 29 29 H 1.09000 * 109.47409 * 60.00026 * 1 2 3 30 30 H 1.09000 * 109.47239 * 180.02562 * 1 2 3 31 31 H 1.07996 * 119.98924 * 0.02594 * 4 3 2 32 32 H 1.08992 * 109.47245 * 179.97438 * 7 6 5 33 33 H 1.09006 * 109.46854 * 299.99958 * 7 6 5 34 34 H 1.09004 * 109.46720 * 59.99428 * 7 6 5 35 35 H 1.09006 * 109.55207 * 42.90722 * 12 11 9 36 36 H 1.08999 * 109.55558 * 163.20547 * 12 11 9 37 37 H 1.08996 * 108.42854 * 145.35660 * 13 12 11 38 38 H 1.08997 * 108.15790 * 28.18324 * 13 12 11 39 39 H 1.09004 * 109.02426 * 305.80704 * 14 13 12 40 40 H 1.08997 * 109.02788 * 186.96999 * 14 13 12 41 41 H 1.08995 * 109.35182 * 168.90295 * 15 14 13 42 42 H 1.09005 * 109.35354 * 49.32929 * 15 14 13 43 43 H 1.09006 * 109.47047 * 171.47155 * 17 16 15 44 44 H 1.08993 * 109.47432 * 291.47225 * 17 16 15 45 45 H 1.09001 * 109.47235 * 51.47662 * 17 16 15 46 46 H 1.09000 * 109.47331 * 299.03517 * 18 16 15 47 47 H 1.09001 * 109.47289 * 59.03866 * 18 16 15 48 48 H 1.09003 * 109.46900 * 179.03653 * 18 16 15 49 49 H 1.08998 * 109.64600 * 262.07440 * 19 11 9 50 50 H 1.09000 * 109.64083 * 22.49313 * 19 11 9 51 51 H 1.08005 * 120.02037 * 179.74647 * 20 8 5 52 52 H 1.09009 * 109.46746 * 135.44341 * 22 21 20 53 53 H 0.96702 * 113.99863 * 300.01108 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0451 1.2093 0.0000 4 6 1.2869 2.3706 -0.0005 5 6 1.9116 3.6060 0.0000 6 8 1.1718 4.7430 0.0000 7 6 -0.2493 4.5924 0.0000 8 6 3.3128 3.6778 0.0055 9 6 3.9862 4.9878 0.0112 10 8 3.7495 5.7970 -0.8653 11 7 4.8647 5.2896 0.9878 12 6 5.2365 4.3147 1.9912 13 6 4.1192 4.1899 3.0058 14 6 4.2516 5.0502 4.1888 15 6 4.1298 6.5453 3.8252 16 14 5.6303 7.0999 2.8910 17 6 7.1420 6.2861 3.6143 18 6 5.8007 8.9490 3.0408 19 6 5.4820 6.6348 1.0782 20 6 4.0676 2.5003 0.0001 21 6 3.4351 1.2789 0.0006 22 6 4.2503 0.0114 0.0011 23 8 4.2231 -0.5730 -1.3027 24 14 6.0102 0.4051 0.4686 25 1 6.0481 0.9283 1.8578 26 1 6.8331 -0.8280 0.3814 27 1 6.5521 1.4287 -0.4608 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 0.2085 2.3112 -0.0005 32 1 -0.7189 5.5760 0.0005 33 1 -0.5564 4.0431 -0.8900 34 1 -0.5564 4.0430 0.8900 35 1 5.4001 3.3471 1.5167 36 1 6.1499 4.6363 2.4915 37 1 4.0708 3.1533 3.3392 38 1 3.1801 4.4327 2.5085 39 1 5.2242 4.8745 4.6488 40 1 3.4702 4.7936 4.9040 41 1 4.0353 7.1326 4.7385 42 1 3.2439 6.6959 3.2081 43 1 8.0033 6.4885 2.9777 44 1 7.3264 6.6838 4.6122 45 1 6.9808 5.2099 3.6761 46 1 4.9224 9.4308 2.6112 47 1 5.8869 9.2220 4.0925 48 1 6.6925 9.2762 2.5062 49 1 6.4722 6.6150 0.6231 50 1 4.8554 7.3611 0.5606 51 1 5.1465 2.5501 0.0001 52 1 3.8309 -0.6900 0.7224 53 1 3.3364 -0.8041 -1.6117 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946170_12297780.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 13:47:30 Heat of formation + Delta-G solvation = -136.385535 kcal Electronic energy + Delta-G solvation = -34200.544471 eV Core-core repulsion = 29969.329195 eV Total energy + Delta-G solvation = -4231.215276 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.16086 -40.71460 -39.95568 -38.34435 -37.92372 -36.89848 -34.81203 -32.23031 -31.95689 -30.00264 -29.38390 -29.15037 -28.55907 -28.37683 -27.09720 -26.08335 -25.52270 -23.84451 -22.84675 -21.70414 -20.46747 -19.74989 -18.56146 -18.38582 -17.79686 -17.49858 -17.10817 -16.99885 -16.65968 -16.49333 -16.28889 -15.89115 -15.70644 -15.54951 -15.31250 -15.08032 -14.67472 -14.38385 -14.29226 -14.10628 -14.06544 -13.93929 -13.84369 -13.62615 -13.46395 -13.40881 -13.29996 -13.14839 -12.88969 -12.82480 -12.68229 -12.60097 -12.50778 -12.21290 -11.82003 -11.77456 -11.65578 -11.56537 -11.25231 -11.16096 -11.01804 -10.90483 -10.57017 -10.49157 -9.88086 -9.33317 -9.06907 -0.05141 0.14504 1.20089 1.44783 1.50415 1.52796 1.66681 1.73290 1.88074 1.97495 2.00279 2.10162 2.22905 2.48400 2.53250 3.46800 3.53243 3.62393 3.72871 3.76640 3.92679 3.97184 3.99834 4.02360 4.04658 4.08163 4.10806 4.17843 4.25097 4.35547 4.37725 4.41969 4.46356 4.46617 4.60897 4.64850 4.66377 4.69273 4.70738 4.78382 4.84624 4.91209 4.97622 4.98962 5.05698 5.10859 5.17517 5.31065 5.32886 5.39139 5.44919 5.50369 5.65017 5.94569 6.24830 6.52730 6.64628 7.38123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.308 6.308 3 C 0.200 3.800 4 C -0.300 4.300 5 C 0.217 3.783 6 O -0.296 6.296 7 C 0.023 3.977 8 C -0.186 4.186 9 C 0.573 3.427 10 O -0.522 6.522 11 N -0.590 5.590 12 C 0.075 3.925 13 C -0.147 4.147 14 C -0.103 4.103 15 C -0.409 4.409 16 Si 1.008 2.992 17 C -0.455 4.455 18 C -0.447 4.447 19 C -0.181 4.181 20 C -0.023 4.023 21 C -0.183 4.183 22 C -0.075 4.075 23 O -0.538 6.538 24 Si 0.995 3.005 25 H -0.241 1.241 26 H -0.249 1.249 27 H -0.250 1.250 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.107 0.893 31 H 0.144 0.856 32 H 0.106 0.894 33 H 0.059 0.941 34 H 0.058 0.942 35 H 0.077 0.923 36 H 0.103 0.897 37 H 0.071 0.929 38 H 0.069 0.931 39 H 0.065 0.935 40 H 0.064 0.936 41 H 0.077 0.923 42 H 0.075 0.925 43 H 0.072 0.928 44 H 0.075 0.925 45 H 0.076 0.924 46 H 0.071 0.929 47 H 0.072 0.928 48 H 0.072 0.928 49 H 0.071 0.929 50 H 0.095 0.905 51 H 0.144 0.856 52 H 0.078 0.922 53 H 0.369 0.631 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.698 -2.253 5.292 6.354 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.220 6.220 3 C 0.153 3.847 4 C -0.320 4.320 5 C 0.169 3.831 6 O -0.207 6.207 7 C -0.072 4.072 8 C -0.190 4.190 9 C 0.361 3.639 10 O -0.398 6.398 11 N -0.323 5.323 12 C -0.048 4.048 13 C -0.185 4.185 14 C -0.141 4.141 15 C -0.496 4.496 16 Si 1.202 2.798 17 C -0.562 4.562 18 C -0.556 4.556 19 C -0.349 4.349 20 C -0.041 4.041 21 C -0.185 4.185 22 C -0.184 4.184 23 O -0.343 6.343 24 Si 0.815 3.185 25 H -0.164 1.164 26 H -0.173 1.173 27 H -0.174 1.174 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.125 0.875 31 H 0.162 0.838 32 H 0.125 0.875 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.095 0.905 36 H 0.120 0.880 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.084 0.916 40 H 0.083 0.917 41 H 0.096 0.904 42 H 0.094 0.906 43 H 0.091 0.909 44 H 0.094 0.906 45 H 0.095 0.905 46 H 0.090 0.910 47 H 0.091 0.909 48 H 0.091 0.909 49 H 0.090 0.910 50 H 0.113 0.887 51 H 0.161 0.839 52 H 0.096 0.904 53 H 0.217 0.783 Dipole moment (debyes) X Y Z Total from point charges -1.260 -1.557 5.040 5.423 hybrid contribution -1.962 -0.258 -0.298 2.001 sum -3.222 -1.815 4.742 6.013 Atomic orbital electron populations 1.23192 0.77445 1.04757 1.01737 1.86033 1.22140 1.26385 1.87474 1.18637 0.91047 0.83883 0.91092 1.21218 1.00939 0.91417 1.18418 1.18552 0.89515 0.85057 0.90015 1.86192 1.19411 1.28245 1.86829 1.23199 0.77853 1.04648 1.01461 1.18919 0.90619 0.94046 1.15446 1.17812 0.78769 0.86154 0.81125 1.90802 1.63053 1.49962 1.35937 1.47520 1.44055 1.12983 1.27773 1.21607 0.99306 0.93686 0.90174 1.20722 0.99933 1.01029 0.96825 1.20213 1.02530 0.93897 0.97429 1.26241 1.15021 1.00052 1.08276 0.79541 0.67675 0.67568 0.65006 1.26484 1.15036 1.07303 1.07398 1.26070 1.04951 1.19703 1.04839 1.27107 1.00772 0.86504 1.20492 1.20902 0.99737 0.89776 0.93675 1.19365 0.90937 0.96128 1.12032 1.25092 1.11933 0.92475 0.88854 1.86690 1.33744 1.82301 1.31603 0.84780 0.72853 0.81136 0.79760 1.16389 1.17288 1.17375 0.92265 0.92194 0.87473 0.83835 0.87533 0.92231 0.92369 0.90513 0.87955 0.91032 0.91202 0.91623 0.91728 0.90418 0.90568 0.90859 0.90633 0.90528 0.90991 0.90853 0.90929 0.91006 0.88666 0.83926 0.90374 0.78314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 2 O -0.31 0.10 9.39 -18.88 -0.18 -0.07 16 3 C 0.20 0.20 6.63 -39.07 -0.26 -0.06 16 4 C -0.30 -0.25 8.01 -39.34 -0.31 -0.56 16 5 C 0.22 0.67 6.69 -38.73 -0.26 0.41 16 6 O -0.30 -1.01 9.75 -19.67 -0.19 -1.20 16 7 C 0.02 -0.03 9.81 101.05 0.99 0.97 16 8 C -0.19 -0.71 4.03 -104.83 -0.42 -1.13 16 9 C 0.57 3.10 6.45 -12.58 -0.08 3.02 16 10 O -0.52 -4.83 16.51 4.24 0.07 -4.76 16 11 N -0.59 -1.37 2.62 -114.55 -0.30 -1.67 16 12 C 0.08 -0.01 4.89 -5.76 -0.03 -0.04 16 13 C -0.15 0.09 4.84 -30.45 -0.15 -0.06 16 14 C -0.10 0.14 5.28 -28.95 -0.15 -0.01 16 15 C -0.41 0.48 4.73 37.87 0.18 0.66 16 16 Si 1.01 -2.12 10.33 -169.99 -1.76 -3.88 16 17 C -0.46 1.12 7.85 101.05 0.79 1.91 16 18 C -0.45 0.61 8.65 101.05 0.87 1.49 16 19 C -0.18 -0.17 5.32 60.83 0.32 0.15 16 20 C -0.02 -0.05 6.60 -39.23 -0.26 -0.31 16 21 C -0.18 -0.29 5.27 -104.53 -0.55 -0.84 16 22 C -0.08 -0.06 2.33 36.00 0.08 0.02 16 23 O -0.54 -1.05 12.65 -35.23 -0.45 -1.49 16 24 Si 1.00 0.48 25.55 -169.99 -4.34 -3.87 16 25 H -0.24 0.29 7.11 56.52 0.40 0.69 16 26 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 27 H -0.25 -0.31 6.53 56.52 0.37 0.06 16 28 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 29 H 0.06 -0.23 7.65 -51.93 -0.40 -0.63 16 30 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 31 H 0.14 -0.24 4.50 -52.49 -0.24 -0.48 16 32 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 33 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 34 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 35 H 0.08 -0.04 4.41 -51.93 -0.23 -0.27 16 36 H 0.10 -0.22 3.48 -51.93 -0.18 -0.40 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.07 0.08 6.76 -51.93 -0.35 -0.27 16 39 H 0.07 -0.17 6.37 -51.93 -0.33 -0.50 16 40 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.08 -0.13 7.95 -51.93 -0.41 -0.55 16 42 H 0.08 0.02 7.91 -51.93 -0.41 -0.40 16 43 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 44 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 45 H 0.08 -0.22 4.87 -51.93 -0.25 -0.47 16 46 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 48 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 49 H 0.07 0.01 7.98 -51.93 -0.41 -0.40 16 50 H 0.09 0.24 7.27 -51.93 -0.38 -0.14 16 51 H 0.14 0.19 3.46 -52.48 -0.18 0.01 16 52 H 0.08 -0.04 7.81 -51.92 -0.41 -0.44 16 53 H 0.37 -0.12 8.64 45.56 0.39 0.27 16 LS Contribution 399.13 15.07 6.01 6.01 Total: 0.00 -8.44 399.13 -6.93 -15.38 By element: Atomic # 1 Polarization: -3.40 SS G_CDS: -7.57 Total: -10.96 kcal Atomic # 6 Polarization: 4.76 SS G_CDS: 1.76 Total: 6.52 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: -0.30 Total: -1.67 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -0.74 Total: -7.53 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -6.10 Total: -7.74 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -8.44 -6.93 -15.38 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946170_12297780.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.010 kcal (2) G-P(sol) polarization free energy of solvation -8.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds