Wall clock time and date at job start Sun Mar 7 2021 14:32:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86295 * 1 3 3 C 1.86299 * 109.15437 * 2 1 4 4 C 1.85246 * 109.31202 * 119.51863 * 2 1 3 5 5 C 1.54359 * 110.16881 * 202.02475 * 4 2 1 6 6 C 1.46876 * 111.74406 * 289.11613 * 5 4 2 7 7 C 1.51995 * 115.18515 * 66.46591 * 6 5 4 8 8 N 1.44757 * 108.99151 * 266.90633 * 7 6 5 9 9 C 1.34775 * 121.25842 * 283.04258 * 8 7 6 10 10 O 1.21278 * 120.00019 * 180.02562 * 9 8 7 11 11 C 1.50697 * 119.99955 * 0.02562 * 9 8 7 12 12 O 1.42895 * 109.47310 * 180.02562 * 11 9 8 13 13 C 1.35903 * 117.00144 * 180.02562 * 12 11 9 14 14 C 1.38708 * 120.05363 * 359.97438 * 13 12 11 15 15 C 1.38167 * 119.94243 * 179.72659 * 14 13 12 16 16 C 1.38249 * 120.05544 * 0.27903 * 15 14 13 17 17 C 1.38284 * 120.10962 * 359.97438 * 16 15 14 18 18 C 1.38121 * 120.05827 * 359.97438 * 17 16 15 19 19 C 1.50701 * 120.02745 * 180.02562 * 18 17 16 20 20 O 1.42893 * 109.47347 * 105.00092 * 19 18 17 21 21 Si 1.86301 * 109.47287 * 344.99703 * 19 18 17 22 22 H 1.48504 * 109.47016 * 60.00205 * 21 19 18 23 23 H 1.48495 * 109.47290 * 180.02562 * 21 19 18 24 24 H 1.48500 * 109.47119 * 300.00235 * 21 19 18 25 25 C 1.48292 * 117.48838 * 103.31693 * 8 7 6 26 26 H 1.08999 * 109.47343 * 300.48291 * 1 2 3 27 27 H 1.09003 * 109.47253 * 60.48221 * 1 2 3 28 28 H 1.09002 * 109.47395 * 180.48167 * 1 2 3 29 29 H 1.08997 * 109.47411 * 170.28249 * 3 2 1 30 30 H 1.09004 * 109.47066 * 290.28744 * 3 2 1 31 31 H 1.09008 * 109.47066 * 50.28649 * 3 2 1 32 32 H 1.09002 * 109.35351 * 81.81755 * 4 2 1 33 33 H 1.08998 * 109.24229 * 322.16422 * 4 2 1 34 34 H 1.08993 * 109.02758 * 168.52821 * 5 4 2 35 35 H 1.08997 * 109.02448 * 49.69496 * 5 4 2 36 36 H 1.08997 * 108.33784 * 304.98265 * 6 5 4 37 37 H 1.09005 * 108.19787 * 187.83777 * 6 5 4 38 38 H 1.09002 * 109.55056 * 147.05597 * 7 6 5 39 39 H 1.08994 * 109.55212 * 26.76779 * 7 6 5 40 40 H 1.08998 * 109.47376 * 59.99818 * 11 9 8 41 41 H 1.08999 * 109.46872 * 299.99999 * 11 9 8 42 42 H 1.07995 * 120.03000 * 0.02562 * 14 13 12 43 43 H 1.07993 * 119.97468 * 180.25332 * 15 14 13 44 44 H 1.07998 * 119.94196 * 179.97438 * 16 15 14 45 45 H 1.08010 * 119.97297 * 180.02562 * 17 16 15 46 46 H 1.09005 * 109.46839 * 225.00288 * 19 18 17 47 47 H 0.96699 * 114.00035 * 179.97438 * 20 19 18 48 48 H 1.09004 * 109.63964 * 81.82472 * 25 8 7 49 49 H 1.08998 * 109.64463 * 202.43889 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4742 1.7599 0.0000 4 6 2.4756 -0.8614 1.5213 5 6 3.9192 -0.4171 1.8395 6 6 4.8804 -0.9531 0.8668 7 6 4.7373 -0.4151 -0.5476 8 7 3.8828 -1.3043 -1.3056 9 6 4.3415 -2.4797 -1.7794 10 8 3.6058 -3.2070 -2.4123 11 6 5.7686 -2.8901 -1.5229 12 8 6.0127 -4.1644 -2.1216 13 6 7.2612 -4.6829 -1.9816 14 6 8.2312 -3.9795 -1.2829 15 6 9.4980 -4.5114 -1.1371 16 6 9.8008 -5.7410 -1.6919 17 6 8.8369 -6.4418 -2.3934 18 6 7.5687 -5.9149 -2.5411 19 6 6.5187 -6.6795 -3.3052 20 8 5.5852 -7.2531 -2.3880 21 14 7.3321 -8.0342 -4.2922 22 1 8.0450 -8.9568 -3.3725 23 1 6.2975 -8.7872 -5.0456 24 1 8.3022 -7.4380 -5.2454 25 6 2.4855 -0.8703 -1.5465 26 1 -0.3634 0.5213 0.8856 27 1 -0.3634 0.5063 -0.8943 28 1 -0.3634 -1.0276 0.0086 29 1 3.5502 1.7708 0.1735 30 1 2.2568 2.2200 -0.9640 31 1 1.9731 2.3185 0.7906 32 1 2.4569 -1.9390 1.3585 33 1 1.8274 -0.6115 2.3612 34 1 4.1879 -0.7690 2.8355 35 1 3.9675 0.6717 1.8238 36 1 4.7676 -2.0367 0.8347 37 1 5.8858 -0.7248 1.2205 38 1 5.7188 -0.3627 -1.0189 39 1 4.2927 0.5795 -0.5163 40 1 5.9407 -2.9542 -0.4485 41 1 6.4427 -2.1508 -1.9554 42 1 7.9951 -3.0191 -0.8490 43 1 10.2525 -3.9660 -0.5897 44 1 10.7917 -6.1548 -1.5772 45 1 9.0758 -7.4024 -2.8256 46 1 5.9955 -6.0022 -3.9803 47 1 4.8792 -7.7606 -2.8112 48 1 2.4557 -0.1843 -2.3931 49 1 1.8622 -1.7401 -1.7540 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946170_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:32:38 Heat of formation + Delta-G solvation = -101.571326 kcal Electronic energy + Delta-G solvation = -28161.319911 eV Core-core repulsion = 24405.834103 eV Total energy + Delta-G solvation = -3755.485808 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.61413 -40.71003 -38.56470 -37.93297 -37.32117 -34.98015 -32.82139 -31.40453 -30.45761 -29.62489 -29.40492 -28.51273 -26.71284 -26.50752 -25.45789 -23.35279 -22.36940 -21.85279 -20.20460 -19.31236 -18.30520 -18.06215 -17.59111 -17.28627 -16.87466 -16.67830 -16.35414 -15.81374 -15.44477 -15.40478 -15.30325 -14.97642 -14.84161 -14.39063 -14.28776 -14.16256 -14.01590 -13.94853 -13.84654 -13.56266 -13.51401 -13.39230 -13.31171 -13.00019 -12.88516 -12.66852 -12.63953 -12.17733 -12.01385 -11.91226 -11.71970 -11.64987 -11.57862 -11.25818 -10.99103 -10.69893 -10.59501 -10.10203 -9.91180 -9.50942 -9.13108 0.27680 0.47829 1.25404 1.29479 1.49138 1.52609 1.57483 1.61307 1.66647 1.82593 1.98081 2.38913 2.52666 2.72143 3.37253 3.53290 3.58335 3.77313 3.78637 3.84953 3.91084 3.97570 4.02630 4.16231 4.23332 4.30871 4.31681 4.38389 4.49790 4.53250 4.55679 4.58061 4.61179 4.64624 4.65508 4.68583 4.76909 4.81487 4.93393 5.01971 5.06434 5.15968 5.30399 5.30597 5.32510 5.40130 5.43167 5.48156 5.54210 5.75175 6.24795 6.41777 6.81260 7.17104 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.012 2.988 3 C -0.455 4.455 4 C -0.412 4.412 5 C -0.105 4.105 6 C -0.151 4.151 7 C 0.077 3.923 8 N -0.591 5.591 9 C 0.517 3.483 10 O -0.512 6.512 11 C 0.038 3.962 12 O -0.279 6.279 13 C 0.154 3.846 14 C -0.213 4.213 15 C -0.073 4.073 16 C -0.151 4.151 17 C -0.084 4.084 18 C -0.104 4.104 19 C -0.072 4.072 20 O -0.540 6.540 21 Si 0.946 3.054 22 H -0.248 1.248 23 H -0.255 1.255 24 H -0.249 1.249 25 C -0.181 4.181 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.076 0.924 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.079 0.921 34 H 0.066 0.934 35 H 0.067 0.933 36 H 0.068 0.932 37 H 0.074 0.926 38 H 0.081 0.919 39 H 0.106 0.894 40 H 0.095 0.905 41 H 0.091 0.909 42 H 0.129 0.871 43 H 0.129 0.871 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.076 0.924 47 H 0.378 0.622 48 H 0.073 0.927 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.816 5.035 2.439 5.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.206 2.794 3 C -0.562 4.562 4 C -0.498 4.498 5 C -0.142 4.142 6 C -0.190 4.190 7 C -0.046 4.046 8 N -0.327 5.327 9 C 0.303 3.697 10 O -0.386 6.386 11 C -0.040 4.040 12 O -0.191 6.191 13 C 0.108 3.892 14 C -0.231 4.231 15 C -0.091 4.091 16 C -0.169 4.169 17 C -0.102 4.102 18 C -0.105 4.105 19 C -0.182 4.182 20 O -0.346 6.346 21 Si 0.768 3.232 22 H -0.172 1.172 23 H -0.180 1.180 24 H -0.172 1.172 25 C -0.348 4.348 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.094 0.906 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.085 0.915 36 H 0.086 0.914 37 H 0.093 0.907 38 H 0.099 0.901 39 H 0.123 0.877 40 H 0.112 0.888 41 H 0.109 0.891 42 H 0.147 0.853 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.148 0.852 46 H 0.094 0.906 47 H 0.225 0.775 48 H 0.091 0.909 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.066 4.139 1.905 5.003 hybrid contribution -0.365 0.323 0.050 0.491 sum 1.700 4.462 1.955 5.160 Atomic orbital electron populations 1.26086 1.19915 1.04896 1.04849 0.79510 0.67407 0.66733 0.65737 1.26490 1.06045 1.18664 1.05050 1.26262 1.00761 1.07896 1.14910 1.20210 0.93780 1.01145 0.99112 1.20927 1.00935 1.02164 0.94945 1.21649 0.96071 0.95425 0.91473 1.47525 1.12251 1.18612 1.54267 1.19971 0.88517 0.81536 0.79657 1.90752 1.57792 1.51459 1.38563 1.22640 0.95656 0.85903 0.99829 1.86207 1.27610 1.33148 1.72111 1.18762 0.83514 0.92533 0.94412 1.21262 0.94639 1.01848 1.05373 1.21001 0.95636 0.95231 0.97219 1.21026 0.99798 0.95788 1.00330 1.20967 0.92115 0.99280 0.97802 1.18615 0.94584 0.93592 1.03685 1.24579 0.94051 1.02878 0.96742 1.86513 1.41478 1.71805 1.34754 0.85820 0.80422 0.78428 0.78487 1.17209 1.17956 1.17239 1.27178 0.85013 1.07298 1.15292 0.90782 0.90911 0.90939 0.90569 0.90877 0.90593 0.90529 0.90235 0.91490 0.91479 0.91368 0.90696 0.90118 0.87669 0.88773 0.89088 0.85270 0.85320 0.85282 0.85229 0.90595 0.77540 0.90886 0.88554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.93 8.65 101.05 0.87 1.80 16 2 Si 1.01 -3.33 10.34 -169.99 -1.76 -5.09 16 3 C -0.46 1.62 7.85 101.05 0.79 2.41 16 4 C -0.41 0.93 4.74 37.87 0.18 1.11 16 5 C -0.11 0.30 5.28 -28.95 -0.15 0.15 16 6 C -0.15 0.48 4.63 -30.17 -0.14 0.34 16 7 C 0.08 -0.24 5.00 -5.49 -0.03 -0.26 16 8 N -0.59 -0.01 2.60 -113.01 -0.29 -0.30 16 9 C 0.52 1.66 7.36 -10.99 -0.08 1.57 16 10 O -0.51 -4.01 16.13 -14.35 -0.23 -4.24 16 11 C 0.04 0.04 3.90 36.00 0.14 0.18 16 12 O -0.28 -1.29 9.01 -39.35 -0.35 -1.65 16 13 C 0.15 0.56 6.66 -39.22 -0.26 0.30 16 14 C -0.21 -0.24 9.04 -39.43 -0.36 -0.59 16 15 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 16 C -0.15 -0.15 10.04 -39.56 -0.40 -0.55 16 17 C -0.08 -0.19 8.66 -39.61 -0.34 -0.53 16 18 C -0.10 -0.39 5.30 -104.47 -0.55 -0.94 16 19 C -0.07 -0.21 2.37 36.01 0.09 -0.13 16 20 O -0.54 -2.01 12.86 -35.23 -0.45 -2.46 16 21 Si 0.95 1.12 25.49 -169.99 -4.33 -3.21 16 22 H -0.25 -0.42 6.73 56.52 0.38 -0.04 16 23 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 24 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 25 C -0.18 0.10 5.36 60.83 0.33 0.42 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 29 H 0.08 -0.32 4.86 -51.93 -0.25 -0.57 16 30 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 31 H 0.07 -0.26 7.96 -51.92 -0.41 -0.67 16 32 H 0.08 -0.07 7.91 -51.93 -0.41 -0.48 16 33 H 0.08 -0.20 7.95 -51.93 -0.41 -0.61 16 34 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 -0.26 6.35 -51.93 -0.33 -0.59 16 36 H 0.07 -0.12 6.20 -51.93 -0.32 -0.44 16 37 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 38 H 0.08 -0.37 7.12 -51.93 -0.37 -0.74 16 39 H 0.11 -0.46 3.50 -51.93 -0.18 -0.64 16 40 H 0.09 -0.09 5.90 -51.93 -0.31 -0.40 16 41 H 0.09 -0.14 7.08 -51.93 -0.37 -0.51 16 42 H 0.13 -0.21 6.30 -52.49 -0.33 -0.54 16 43 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 44 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 45 H 0.13 0.12 4.89 -52.48 -0.26 -0.14 16 46 H 0.08 0.22 7.83 -51.93 -0.41 -0.19 16 47 H 0.38 -0.19 8.74 45.56 0.40 0.20 16 48 H 0.07 -0.08 7.99 -51.93 -0.41 -0.50 16 49 H 0.10 0.13 7.21 -51.93 -0.37 -0.24 16 LS Contribution 374.29 15.07 5.64 5.64 Total: 0.00 -9.41 374.29 -9.01 -18.42 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -6.91 Total: -11.96 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: -0.31 Total: 4.86 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -0.29 Total: -0.30 kcal Atomic # 8 Polarization: -7.31 SS G_CDS: -1.04 Total: -8.35 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: -6.09 Total: -8.30 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -9.41 -9.01 -18.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946170_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.155 kcal (2) G-P(sol) polarization free energy of solvation -9.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.417 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds