Wall clock time and date at job start Sun Mar 7 2021 14:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86301 * 109.14895 * 2 1 4 4 C 1.85244 * 109.31181 * 119.51290 * 2 1 3 5 5 C 1.54353 * 110.17242 * 202.02829 * 4 2 1 6 6 C 1.46874 * 111.74641 * 289.11707 * 5 4 2 7 7 C 1.51995 * 115.18305 * 66.46127 * 6 5 4 8 8 N 1.44761 * 108.99535 * 266.91260 * 7 6 5 9 9 C 1.34778 * 121.25650 * 283.04412 * 8 7 6 10 10 O 1.21283 * 120.00125 * 179.97438 * 9 8 7 11 11 C 1.50705 * 119.99803 * 0.02562 * 9 8 7 12 12 O 1.42894 * 109.47115 * 180.02562 * 11 9 8 13 13 C 1.35902 * 117.00138 * 180.02562 * 12 11 9 14 14 C 1.38714 * 120.05468 * 359.95034 * 13 12 11 15 15 C 1.38166 * 119.94354 * 180.02562 * 14 13 12 16 16 C 1.38246 * 120.05572 * 0.04812 * 15 14 13 17 17 C 1.38293 * 120.10978 * 359.97438 * 16 15 14 18 18 C 1.50701 * 119.96727 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.47028 * 120.01881 * 18 17 16 20 20 Si 1.86301 * 109.47388 * 0.02562 * 18 17 16 21 21 H 1.48498 * 109.46777 * 60.00101 * 20 18 17 22 22 H 1.48499 * 109.46969 * 179.97438 * 20 18 17 23 23 H 1.48498 * 109.47196 * 300.00172 * 20 18 17 24 24 C 1.38115 * 120.05830 * 359.97438 * 17 16 15 25 25 C 1.48292 * 117.49258 * 103.31741 * 8 7 6 26 26 H 1.08999 * 109.47214 * 300.48310 * 1 2 3 27 27 H 1.08995 * 109.46992 * 60.48793 * 1 2 3 28 28 H 1.09003 * 109.46930 * 180.48200 * 1 2 3 29 29 H 1.09005 * 109.46795 * 170.28568 * 3 2 1 30 30 H 1.08997 * 109.47278 * 290.27613 * 3 2 1 31 31 H 1.08996 * 109.47823 * 50.28135 * 3 2 1 32 32 H 1.08998 * 109.35655 * 81.81360 * 4 2 1 33 33 H 1.09004 * 109.23905 * 322.17004 * 4 2 1 34 34 H 1.09001 * 109.02603 * 168.52737 * 5 4 2 35 35 H 1.09000 * 109.02278 * 49.69951 * 5 4 2 36 36 H 1.09008 * 108.33758 * 304.98519 * 6 5 4 37 37 H 1.09000 * 108.19957 * 187.83838 * 6 5 4 38 38 H 1.09002 * 109.54970 * 147.06504 * 7 6 5 39 39 H 1.08996 * 109.55102 * 26.76611 * 7 6 5 40 40 H 1.08998 * 109.47440 * 59.99441 * 11 9 8 41 41 H 1.09000 * 109.47064 * 299.99968 * 11 9 8 42 42 H 1.08001 * 120.02315 * 0.04911 * 14 13 12 43 43 H 1.07995 * 119.97082 * 180.02562 * 15 14 13 44 44 H 1.07998 * 119.94234 * 179.97438 * 16 15 14 45 45 H 1.09004 * 109.47016 * 240.01568 * 18 17 16 46 46 H 0.96702 * 114.00144 * 299.99734 * 19 18 17 47 47 H 1.08000 * 120.03082 * 179.72893 * 24 17 16 48 48 H 1.08999 * 109.63853 * 81.82134 * 25 8 7 49 49 H 1.09004 * 109.64036 * 202.44859 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4742 1.7599 0.0000 4 6 2.4757 -0.8612 1.5214 5 6 3.9192 -0.4170 1.8397 6 6 4.8805 -0.9529 0.8671 7 6 4.7375 -0.4150 -0.5473 8 7 3.8829 -1.3042 -1.3054 9 6 4.3417 -2.4797 -1.7792 10 8 3.6057 -3.2075 -2.4113 11 6 5.7688 -2.8901 -1.5224 12 8 6.0130 -4.1644 -2.1211 13 6 7.2614 -4.6830 -1.9810 14 6 8.2316 -3.9793 -1.2826 15 6 9.5001 -4.5083 -1.1420 16 6 9.8032 -5.7375 -1.6975 17 6 8.8378 -6.4408 -2.3946 18 6 9.1718 -7.7801 -2.9993 19 8 8.3196 -8.7813 -2.4395 20 14 10.9491 -8.2015 -2.6322 21 1 11.1508 -8.2579 -1.1621 22 1 11.2779 -9.5215 -3.2276 23 1 11.8347 -7.1610 -3.2138 24 6 7.5679 -5.9167 -2.5371 25 6 2.4856 -0.8703 -1.5465 26 1 -0.3633 0.5213 0.8856 27 1 -0.3633 0.5062 -0.8943 28 1 -0.3633 -1.0277 0.0086 29 1 3.5503 1.7708 0.1734 30 1 2.2569 2.2200 -0.9639 31 1 1.9731 2.3187 0.7904 32 1 2.4569 -1.9388 1.3588 33 1 1.8273 -0.6113 2.3612 34 1 4.1878 -0.7688 2.8358 35 1 3.9675 0.6719 1.8240 36 1 4.7677 -2.0367 0.8349 37 1 5.8859 -0.7246 1.2209 38 1 5.7189 -0.3627 -1.0186 39 1 4.2927 0.5796 -0.5161 40 1 5.9409 -2.9540 -0.4480 41 1 6.4429 -2.1508 -1.9549 42 1 7.9953 -3.0188 -0.8488 43 1 10.2557 -3.9611 -0.5980 44 1 10.7955 -6.1491 -1.5868 45 1 9.0235 -7.7387 -4.0784 46 1 8.3988 -8.8737 -1.4801 47 1 6.8156 -6.4643 -3.0853 48 1 2.4559 -0.1844 -2.3930 49 1 1.8624 -1.7403 -1.7538 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946170_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:40:51 Heat of formation + Delta-G solvation = -104.870861 kcal Electronic energy + Delta-G solvation = -27533.276312 eV Core-core repulsion = 23777.647425 eV Total energy + Delta-G solvation = -3755.628886 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.63403 -40.75509 -39.03034 -38.09242 -37.19141 -35.01649 -32.47700 -31.83169 -30.47298 -29.62545 -29.41084 -28.52896 -27.04317 -26.43772 -25.42364 -23.68552 -22.48095 -21.79504 -20.28274 -19.33795 -18.37773 -17.82466 -17.58216 -17.28318 -17.13379 -16.61325 -16.42968 -16.12672 -15.71524 -15.40804 -15.36440 -14.97421 -14.91132 -14.53868 -14.36644 -14.28542 -14.08587 -13.98774 -13.95077 -13.57682 -13.54735 -13.40977 -13.31958 -13.02789 -12.97841 -12.67679 -12.56543 -12.21977 -12.15259 -11.95192 -11.94069 -11.67084 -11.53970 -11.28497 -11.01000 -10.74427 -10.62554 -10.47983 -9.90594 -9.54520 -9.25291 0.20175 0.40422 1.12711 1.27063 1.44184 1.45953 1.52129 1.57767 1.64095 1.78792 1.91900 2.36814 2.47768 2.67319 3.31526 3.48126 3.50263 3.64401 3.71018 3.75531 3.83937 3.88533 3.97167 4.00451 4.17162 4.20697 4.28200 4.38124 4.47711 4.51205 4.55637 4.56337 4.58796 4.63232 4.63484 4.64704 4.73769 4.78213 4.91160 4.97599 5.03334 5.12606 5.23504 5.27784 5.28974 5.34951 5.41758 5.43173 5.45505 5.65465 6.20861 6.37283 6.56296 7.12502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.013 2.987 3 C -0.456 4.456 4 C -0.412 4.412 5 C -0.105 4.105 6 C -0.151 4.151 7 C 0.077 3.923 8 N -0.591 5.591 9 C 0.516 3.484 10 O -0.513 6.513 11 C 0.040 3.960 12 O -0.289 6.289 13 C 0.130 3.870 14 C -0.207 4.207 15 C -0.072 4.072 16 C -0.163 4.163 17 C -0.080 4.080 18 C -0.083 4.083 19 O -0.536 6.536 20 Si 0.956 3.044 21 H -0.251 1.251 22 H -0.254 1.254 23 H -0.251 1.251 24 C -0.118 4.118 25 C -0.181 4.181 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.075 0.925 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.079 0.921 34 H 0.066 0.934 35 H 0.067 0.933 36 H 0.067 0.933 37 H 0.075 0.925 38 H 0.081 0.919 39 H 0.106 0.894 40 H 0.095 0.905 41 H 0.093 0.907 42 H 0.129 0.871 43 H 0.130 0.870 44 H 0.123 0.877 45 H 0.121 0.879 46 H 0.377 0.623 47 H 0.138 0.862 48 H 0.073 0.927 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.498 5.758 4.488 7.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.207 2.793 3 C -0.563 4.563 4 C -0.498 4.498 5 C -0.143 4.143 6 C -0.189 4.189 7 C -0.047 4.047 8 N -0.326 5.326 9 C 0.302 3.698 10 O -0.387 6.387 11 C -0.038 4.038 12 O -0.201 6.201 13 C 0.085 3.915 14 C -0.226 4.226 15 C -0.090 4.090 16 C -0.181 4.181 17 C -0.080 4.080 18 C -0.194 4.194 19 O -0.341 6.341 20 Si 0.779 3.221 21 H -0.175 1.175 22 H -0.178 1.178 23 H -0.174 1.174 24 C -0.137 4.137 25 C -0.348 4.348 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.094 0.906 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.085 0.915 36 H 0.086 0.914 37 H 0.093 0.907 38 H 0.099 0.901 39 H 0.124 0.876 40 H 0.113 0.887 41 H 0.110 0.890 42 H 0.147 0.853 43 H 0.148 0.852 44 H 0.140 0.860 45 H 0.138 0.862 46 H 0.224 0.776 47 H 0.156 0.844 48 H 0.092 0.908 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.651 4.946 3.557 6.644 hybrid contribution -0.133 0.533 0.607 0.818 sum 2.518 5.478 4.164 7.327 Atomic orbital electron populations 1.26086 1.19900 1.04904 1.04866 0.79499 0.67423 0.66720 0.65670 1.26490 1.06028 1.18673 1.05075 1.26260 1.00754 1.07867 1.14936 1.20212 0.93782 1.01185 0.99095 1.20926 1.00952 1.02105 0.94947 1.21658 0.96079 0.95461 0.91460 1.47530 1.12295 1.18576 1.54190 1.19989 0.88515 0.81614 0.79675 1.90764 1.57807 1.51520 1.38596 1.22636 0.95697 0.85779 0.99727 1.86174 1.27822 1.33557 1.72553 1.19068 0.83586 0.93379 0.95516 1.21285 0.94558 1.01769 1.04953 1.20873 0.95766 0.94892 0.97456 1.20967 0.99160 0.96645 1.01338 1.20130 0.93360 0.96746 0.97804 1.25060 1.06802 0.85633 1.01861 1.86537 1.65061 1.55934 1.26582 0.85594 0.74349 0.80955 0.81216 1.17493 1.17822 1.17435 1.20269 0.97143 0.93659 1.02632 1.27196 0.84946 1.07336 1.15368 0.90771 0.90897 0.90938 0.90584 0.90864 0.90578 0.90547 0.90206 0.91484 0.91452 0.91415 0.90684 0.90098 0.87623 0.88728 0.88969 0.85308 0.85205 0.85979 0.86157 0.77599 0.84387 0.90833 0.88529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.00 8.65 101.05 0.87 1.87 16 2 Si 1.01 -3.56 10.34 -169.99 -1.76 -5.32 16 3 C -0.46 1.70 7.85 101.05 0.79 2.50 16 4 C -0.41 1.07 4.74 37.87 0.18 1.25 16 5 C -0.11 0.34 5.27 -28.95 -0.15 0.19 16 6 C -0.15 0.54 4.63 -30.17 -0.14 0.40 16 7 C 0.08 -0.26 5.00 -5.48 -0.03 -0.29 16 8 N -0.59 0.14 2.60 -113.00 -0.29 -0.16 16 9 C 0.52 1.51 7.36 -10.98 -0.08 1.43 16 10 O -0.51 -4.00 16.13 -14.35 -0.23 -4.23 16 11 C 0.04 0.02 3.90 36.01 0.14 0.16 16 12 O -0.29 -1.15 9.67 -39.34 -0.38 -1.54 16 13 C 0.13 0.34 6.69 -39.21 -0.26 0.08 16 14 C -0.21 -0.06 9.04 -39.43 -0.36 -0.41 16 15 C -0.07 0.01 10.04 -39.60 -0.40 -0.39 16 16 C -0.16 -0.08 8.67 -39.56 -0.34 -0.42 16 17 C -0.08 -0.10 5.39 -104.65 -0.56 -0.66 16 18 C -0.08 -0.02 2.82 36.01 0.10 0.08 16 19 O -0.54 -0.57 12.77 -35.23 -0.45 -1.02 16 20 Si 0.96 -0.43 25.07 -169.99 -4.26 -4.69 16 21 H -0.25 0.10 7.11 56.52 0.40 0.50 16 22 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 23 H -0.25 0.01 7.11 56.52 0.40 0.41 16 24 C -0.12 -0.32 9.55 -39.43 -0.38 -0.70 16 25 C -0.18 0.13 5.36 60.83 0.33 0.45 16 26 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 27 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.08 -0.33 4.87 -51.93 -0.25 -0.59 16 30 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 31 H 0.08 -0.27 7.96 -51.93 -0.41 -0.69 16 32 H 0.08 -0.10 7.91 -51.93 -0.41 -0.51 16 33 H 0.08 -0.22 7.95 -51.93 -0.41 -0.64 16 34 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.07 -0.29 6.35 -51.93 -0.33 -0.61 16 36 H 0.07 -0.16 6.20 -51.92 -0.32 -0.48 16 37 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 38 H 0.08 -0.40 7.12 -51.93 -0.37 -0.76 16 39 H 0.11 -0.49 3.50 -51.93 -0.18 -0.67 16 40 H 0.09 -0.18 5.90 -51.93 -0.31 -0.48 16 41 H 0.09 -0.18 7.08 -51.93 -0.37 -0.55 16 42 H 0.13 -0.30 6.30 -52.49 -0.33 -0.63 16 43 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 44 H 0.12 -0.11 4.88 -52.49 -0.26 -0.37 16 45 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 46 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 47 H 0.14 0.44 8.06 -52.49 -0.42 0.02 16 48 H 0.07 -0.09 7.99 -51.93 -0.41 -0.51 16 49 H 0.10 0.12 7.21 -51.93 -0.37 -0.26 16 LS Contribution 374.97 15.07 5.65 5.65 Total: 0.00 -8.97 374.97 -8.91 -17.88 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -6.90 Total: -12.12 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: -0.29 Total: 5.55 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.29 Total: -0.16 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -1.06 Total: -6.79 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: -6.02 Total: -10.01 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.97 -8.91 -17.88 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946170_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.994 kcal (2) G-P(sol) polarization free energy of solvation -8.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.877 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds