Wall clock time and date at job start Sun Mar 7 2021 14:41:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35895 * 117.00534 * 2 1 4 4 C 1.38751 * 120.02756 * 0.02562 * 3 2 1 5 5 C 1.38193 * 120.05727 * 180.02562 * 4 3 2 6 6 C 1.38150 * 120.10902 * 0.02562 * 5 4 3 7 7 C 1.50700 * 119.97581 * 179.97438 * 6 5 4 8 8 O 1.42898 * 109.47058 * 105.02060 * 7 6 5 9 9 Si 1.86303 * 109.47069 * 345.02363 * 7 6 5 10 10 H 1.48500 * 109.46992 * 59.99535 * 9 7 6 11 11 H 1.48499 * 109.47465 * 179.97438 * 9 7 6 12 12 H 1.48500 * 109.47044 * 300.00261 * 9 7 6 13 13 C 1.38799 * 120.05785 * 0.02562 * 6 5 4 14 14 O 1.35889 * 120.03194 * 179.97438 * 13 6 5 15 15 C 1.42898 * 117.00470 * 179.97438 * 14 13 6 16 16 C 1.50693 * 109.47626 * 180.02562 * 15 14 13 17 17 O 1.21280 * 119.99966 * 0.02562 * 16 15 14 18 18 N 1.34779 * 120.00374 * 179.97438 * 16 15 14 19 19 C 1.44757 * 121.25058 * 0.02562 * 18 16 15 20 20 C 1.51992 * 108.99080 * 283.04005 * 19 18 16 21 21 C 1.46876 * 115.18643 * 266.91199 * 20 19 18 22 22 C 1.54347 * 111.74588 * 66.46669 * 21 20 19 23 23 Si 1.85243 * 110.17009 * 289.11594 * 22 21 20 24 24 C 1.86306 * 109.31230 * 202.02358 * 23 22 21 25 25 C 1.86294 * 109.31535 * 321.44385 * 23 22 21 26 26 C 1.48290 * 121.25531 * 179.97438 * 18 16 15 27 27 C 1.38614 * 119.94059 * 0.23065 * 13 6 5 28 28 H 1.08997 * 109.47419 * 59.99523 * 1 2 3 29 29 H 1.08996 * 109.47677 * 180.02562 * 1 2 3 30 30 H 1.09012 * 109.46614 * 300.00073 * 1 2 3 31 31 H 1.08006 * 119.97148 * 0.02661 * 4 3 2 32 32 H 1.07999 * 119.94840 * 179.97438 * 5 4 3 33 33 H 1.08996 * 109.47501 * 225.02518 * 7 6 5 34 34 H 0.96693 * 113.99997 * 300.00129 * 8 7 6 35 35 H 1.08998 * 109.46680 * 59.99819 * 15 14 13 36 36 H 1.09006 * 109.47055 * 300.00597 * 15 14 13 37 37 H 1.08994 * 109.55639 * 163.18779 * 19 18 16 38 38 H 1.09006 * 109.55354 * 42.88899 * 19 18 16 39 39 H 1.09001 * 108.33923 * 28.39214 * 20 19 18 40 40 H 1.09001 * 108.34091 * 145.61146 * 20 19 18 41 41 H 1.09000 * 109.02422 * 187.05185 * 21 20 19 42 42 H 1.08997 * 109.02590 * 305.88344 * 21 20 19 43 43 H 1.09001 * 109.35140 * 49.33362 * 22 21 20 44 44 H 1.09002 * 109.35416 * 169.04255 * 22 21 20 45 45 H 1.08993 * 109.47095 * 60.00080 * 24 23 22 46 46 H 1.08997 * 109.47188 * 180.02562 * 24 23 22 47 47 H 1.09005 * 109.46824 * 300.00097 * 24 23 22 48 48 H 1.08999 * 109.47316 * 50.76306 * 25 23 22 49 49 H 1.08994 * 109.47780 * 170.76885 * 25 23 22 50 50 H 1.09008 * 109.46863 * 290.77026 * 25 23 22 51 51 H 1.09003 * 109.63623 * 22.71936 * 26 18 16 52 52 H 1.08995 * 109.63907 * 262.09661 * 26 18 16 53 53 H 1.07994 * 120.05580 * 179.75237 * 27 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2910 2.3749 0.0005 5 6 1.9178 3.6065 0.0000 6 6 3.2973 3.6820 -0.0016 7 6 3.9777 5.0266 -0.0028 8 8 4.5058 5.2943 1.2978 9 14 2.7436 6.3467 -0.4556 10 1 1.6382 6.3521 0.5360 11 1 3.4139 7.6718 -0.4562 12 1 2.1947 6.0685 -1.8071 13 6 4.0571 2.5204 -0.0032 14 8 5.4139 2.5953 -0.0053 15 6 6.1319 1.3598 -0.0063 16 6 7.6127 1.6393 -0.0080 17 8 8.0138 2.7839 -0.0078 18 7 8.4915 0.6174 -0.0087 19 6 8.0428 -0.7589 -0.0083 20 6 7.5822 -1.1286 1.3922 21 6 8.6063 -1.7474 2.2440 22 6 9.7433 -0.7595 2.5807 23 14 10.7729 -0.4337 1.0756 24 6 12.4540 0.1752 1.5991 25 6 10.9690 -2.0142 0.1091 26 6 9.9543 0.8605 -0.0109 27 6 3.4306 1.2839 -0.0081 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8901 31 1 0.2124 2.3184 0.0014 32 1 1.3284 4.5114 0.0000 33 1 4.7890 5.0227 -0.7306 34 1 3.8383 5.3129 1.9971 35 1 5.8688 0.7875 -0.8959 36 1 5.8715 0.7875 0.8841 37 1 8.8642 -1.4105 -0.3060 38 1 7.2136 -0.8725 -0.7068 39 1 7.2259 -0.2245 1.8859 40 1 6.7460 -1.8226 1.3062 41 1 8.1416 -2.0838 3.1708 42 1 9.0263 -2.6093 1.7255 43 1 9.3143 0.1778 2.9348 44 1 10.3732 -1.1862 3.3613 45 1 12.9388 -0.5816 2.2157 46 1 13.0620 0.3682 0.7152 47 1 12.3447 1.0957 2.1725 48 1 9.9900 -2.4659 -0.0513 49 1 11.4308 -1.7965 -0.8538 50 1 11.6009 -2.7053 0.6672 51 1 10.1610 1.8549 0.3848 52 1 10.3374 0.7807 -1.0282 53 1 4.0200 0.3790 -0.0134 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946170_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:41:20 Heat of formation + Delta-G solvation = -137.022376 kcal Electronic energy + Delta-G solvation = -32562.040515 eV Core-core repulsion = 28330.797623 eV Total energy + Delta-G solvation = -4231.242892 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.81769 -41.00510 -39.86652 -38.36079 -37.90510 -36.80938 -34.95052 -32.26678 -31.55599 -30.45613 -29.61822 -29.38887 -28.54142 -28.46084 -26.68105 -26.03365 -25.43804 -23.48643 -22.41542 -21.83626 -20.24552 -19.92800 -18.39306 -18.00735 -17.86914 -17.45481 -17.23006 -16.91517 -16.74758 -16.52291 -16.33174 -15.79996 -15.75597 -15.33658 -15.24172 -15.12360 -14.86468 -14.64541 -14.30565 -14.20168 -13.98667 -13.93545 -13.84750 -13.61350 -13.51404 -13.40442 -13.37418 -13.33794 -13.08902 -12.96264 -12.62987 -12.52325 -12.29643 -12.08859 -11.91634 -11.88165 -11.72262 -11.54479 -11.50470 -11.23547 -10.96664 -10.67266 -10.56855 -10.18394 -9.66301 -9.47885 -9.04200 0.23287 0.36304 1.27169 1.30092 1.47920 1.51487 1.60818 1.64293 1.69110 1.82429 2.01086 2.16925 2.41629 2.52651 2.61790 3.38869 3.56676 3.65894 3.71346 3.79179 3.82972 3.88995 3.93480 4.03207 4.04780 4.05493 4.14693 4.25916 4.28327 4.34222 4.39383 4.42123 4.51983 4.53793 4.56258 4.60411 4.63804 4.67007 4.68071 4.79509 4.80509 4.84544 4.96418 5.06716 5.08872 5.18515 5.25660 5.29780 5.32819 5.34389 5.45441 5.47947 5.51329 6.15012 6.30590 6.40632 6.80405 7.20283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.239 4.239 5 C -0.048 4.048 6 C -0.185 4.185 7 C -0.065 4.065 8 O -0.531 6.531 9 Si 0.948 3.052 10 H -0.253 1.253 11 H -0.252 1.252 12 H -0.250 1.250 13 C 0.195 3.805 14 O -0.271 6.271 15 C 0.036 3.964 16 C 0.516 3.484 17 O -0.509 6.509 18 N -0.591 5.591 19 C 0.077 3.923 20 C -0.151 4.151 21 C -0.105 4.105 22 C -0.412 4.412 23 Si 1.013 2.987 24 C -0.449 4.449 25 C -0.456 4.456 26 C -0.181 4.181 27 C -0.247 4.247 28 H 0.059 0.941 29 H 0.103 0.897 30 H 0.059 0.941 31 H 0.134 0.866 32 H 0.134 0.866 33 H 0.117 0.883 34 H 0.369 0.631 35 H 0.093 0.907 36 H 0.096 0.904 37 H 0.105 0.895 38 H 0.081 0.919 39 H 0.068 0.932 40 H 0.075 0.925 41 H 0.066 0.934 42 H 0.067 0.933 43 H 0.076 0.924 44 H 0.079 0.921 45 H 0.073 0.927 46 H 0.072 0.928 47 H 0.072 0.928 48 H 0.076 0.924 49 H 0.072 0.928 50 H 0.075 0.925 51 H 0.096 0.904 52 H 0.073 0.927 53 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.362 -6.318 0.222 6.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.128 3.872 4 C -0.258 4.258 5 C -0.066 4.066 6 C -0.186 4.186 7 C -0.176 4.176 8 O -0.335 6.335 9 Si 0.771 3.229 10 H -0.177 1.177 11 H -0.176 1.176 12 H -0.173 1.173 13 C 0.149 3.851 14 O -0.182 6.182 15 C -0.042 4.042 16 C 0.302 3.698 17 O -0.382 6.382 18 N -0.326 5.326 19 C -0.046 4.046 20 C -0.190 4.190 21 C -0.142 4.142 22 C -0.498 4.498 23 Si 1.207 2.793 24 C -0.558 4.558 25 C -0.563 4.563 26 C -0.349 4.349 27 C -0.267 4.267 28 H 0.077 0.923 29 H 0.121 0.879 30 H 0.077 0.923 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.135 0.865 34 H 0.215 0.785 35 H 0.111 0.889 36 H 0.114 0.886 37 H 0.123 0.877 38 H 0.099 0.901 39 H 0.086 0.914 40 H 0.093 0.907 41 H 0.085 0.915 42 H 0.085 0.915 43 H 0.095 0.905 44 H 0.097 0.903 45 H 0.092 0.908 46 H 0.091 0.909 47 H 0.091 0.909 48 H 0.094 0.906 49 H 0.091 0.909 50 H 0.094 0.906 51 H 0.115 0.885 52 H 0.091 0.909 53 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.022 -4.998 -0.360 5.404 hybrid contribution -0.646 -0.676 0.363 1.003 sum -2.668 -5.674 0.002 6.270 Atomic orbital electron populations 1.23140 0.77660 1.04386 1.01748 1.86070 1.21964 1.26675 1.88031 1.18677 0.91452 0.84345 0.92715 1.21094 1.00397 0.91781 1.12551 1.20738 0.92767 0.97865 0.95197 1.19548 0.92653 0.94661 1.11759 1.24778 1.05905 0.97382 0.89538 1.86615 1.37312 1.93589 1.15958 0.85788 0.77379 0.78760 0.80979 1.17737 1.17598 1.17326 1.18387 0.82107 0.92341 0.92314 1.86263 1.14579 1.29841 1.87553 1.22697 0.90644 0.86855 1.04036 1.19942 0.87090 0.85369 0.77362 1.90775 1.79470 1.20544 1.47440 1.47512 1.05875 1.05300 1.73955 1.21651 1.02438 0.83074 0.97475 1.20928 1.00122 1.02291 0.95649 1.20207 0.95825 0.98297 0.99899 1.26262 1.06069 1.02870 1.14633 0.79472 0.66860 0.66105 0.66856 1.26087 1.17077 1.06552 1.06036 1.26490 1.04922 1.15835 1.09017 1.27146 0.83398 1.14365 1.09959 1.20398 0.92874 0.97389 1.16006 0.92263 0.87887 0.92279 0.84821 0.84900 0.86511 0.78454 0.88875 0.88597 0.87679 0.90087 0.91380 0.90671 0.91513 0.91490 0.90518 0.90262 0.90799 0.90916 0.90930 0.90564 0.90882 0.90607 0.88505 0.90887 0.84421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.38 10.49 -19.41 -0.20 -0.58 16 3 C 0.17 0.30 6.68 -39.24 -0.26 0.04 16 4 C -0.24 -0.18 9.04 -39.41 -0.36 -0.54 16 5 C -0.05 -0.05 8.65 -39.63 -0.34 -0.39 16 6 C -0.18 -0.47 5.27 -104.45 -0.55 -1.02 16 7 C -0.07 -0.16 2.38 36.01 0.09 -0.08 16 8 O -0.53 -1.86 12.88 -35.23 -0.45 -2.31 16 9 Si 0.95 0.84 25.49 -169.99 -4.33 -3.49 16 10 H -0.25 -0.02 6.73 56.52 0.38 0.36 16 11 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 12 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 13 C 0.20 0.61 6.66 -39.24 -0.26 0.35 16 14 O -0.27 -1.19 8.99 -39.30 -0.35 -1.54 16 15 C 0.04 0.04 3.90 36.00 0.14 0.18 16 16 C 0.52 1.77 7.36 -10.99 -0.08 1.68 16 17 O -0.51 -4.17 16.13 -14.35 -0.23 -4.40 16 18 N -0.59 -0.16 2.61 -113.01 -0.29 -0.46 16 19 C 0.08 -0.21 5.01 -5.49 -0.03 -0.24 16 20 C -0.15 0.43 4.63 -30.18 -0.14 0.29 16 21 C -0.10 0.28 5.27 -28.96 -0.15 0.13 16 22 C -0.41 0.86 4.74 37.86 0.18 1.04 16 23 Si 1.01 -3.11 10.33 -169.99 -1.76 -4.86 16 24 C -0.45 0.83 8.65 101.05 0.87 1.71 16 25 C -0.46 1.52 7.85 101.05 0.79 2.31 16 26 C -0.18 0.05 5.35 60.83 0.33 0.37 16 27 C -0.25 -0.44 8.97 -39.29 -0.35 -0.80 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.06 -0.17 7.66 -51.92 -0.40 -0.57 16 31 H 0.13 -0.19 6.29 -52.48 -0.33 -0.52 16 32 H 0.13 -0.09 4.88 -52.49 -0.26 -0.34 16 33 H 0.12 0.40 7.82 -51.93 -0.41 -0.01 16 34 H 0.37 -0.15 8.70 45.56 0.40 0.25 16 35 H 0.09 -0.12 7.06 -51.93 -0.37 -0.48 16 36 H 0.10 -0.09 5.91 -51.93 -0.31 -0.39 16 37 H 0.11 -0.43 3.50 -51.93 -0.18 -0.61 16 38 H 0.08 -0.34 7.12 -51.93 -0.37 -0.71 16 39 H 0.07 -0.11 6.20 -51.93 -0.32 -0.43 16 40 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.07 -0.25 6.35 -51.93 -0.33 -0.58 16 43 H 0.08 -0.06 7.91 -51.93 -0.41 -0.47 16 44 H 0.08 -0.18 7.95 -51.93 -0.41 -0.60 16 45 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 48 H 0.08 -0.30 4.87 -51.93 -0.25 -0.55 16 49 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 50 H 0.07 -0.24 7.96 -51.92 -0.41 -0.66 16 51 H 0.10 0.16 7.21 -51.93 -0.37 -0.22 16 52 H 0.07 -0.07 7.98 -51.93 -0.41 -0.48 16 53 H 0.14 -0.02 6.30 -52.49 -0.33 -0.35 16 LS Contribution 403.68 15.07 6.08 6.08 Total: 0.00 -9.71 403.68 -8.30 -18.00 By element: Atomic # 1 Polarization: -4.80 SS G_CDS: -7.62 Total: -12.42 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 0.86 Total: 5.97 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -0.29 Total: -0.46 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -1.24 Total: -8.83 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: -6.09 Total: -8.35 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.71 -8.30 -18.00 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946170_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.021 kcal (2) G-P(sol) polarization free energy of solvation -9.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.002 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds