Wall clock time and date at job start Sun Mar 7 2021 14:45:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37643 * 125.67551 * 2 1 4 4 C 1.46670 * 126.22468 * 0.02562 * 3 2 1 5 5 O 1.21705 * 120.00046 * 7.88201 * 4 3 2 6 6 N 1.34773 * 120.00253 * 187.88166 * 4 3 2 7 7 C 1.44763 * 121.25198 * 357.37059 * 6 4 3 8 8 C 1.51995 * 108.98925 * 283.04538 * 7 6 4 9 9 C 1.46875 * 115.18477 * 266.90870 * 8 7 6 10 10 C 1.54357 * 111.74691 * 66.46872 * 9 8 7 11 11 Si 1.85466 * 110.36114 * 289.11977 * 10 9 8 12 12 C 1.86299 * 109.20146 * 321.30247 * 11 10 9 13 13 C 1.86297 * 109.52253 * 201.82490 * 11 10 9 14 14 C 1.48286 * 121.25639 * 177.35391 * 6 4 3 15 15 C 1.37881 * 107.55103 * 180.26486 * 3 2 1 16 16 C 1.39882 * 107.09316 * 359.62107 * 15 3 2 17 17 Br 1.89094 * 126.07549 * 180.11260 * 16 15 3 18 18 C 1.35505 * 107.84670 * 0.38287 * 16 15 3 19 19 C 1.50702 * 125.56600 * 179.78222 * 18 16 15 20 20 O 1.42893 * 109.47388 * 306.99315 * 19 18 16 21 21 Si 1.86304 * 109.47258 * 66.99388 * 19 18 16 22 22 H 1.48504 * 109.46994 * 59.89259 * 21 19 18 23 23 H 1.48503 * 109.47162 * 179.88724 * 21 19 18 24 24 H 1.48491 * 109.46989 * 299.89119 * 21 19 18 25 25 H 1.09004 * 109.47275 * 84.39943 * 1 2 3 26 26 H 1.09000 * 109.47065 * 204.39550 * 1 2 3 27 27 H 1.08995 * 109.46953 * 324.40027 * 1 2 3 28 28 H 1.09003 * 109.54978 * 42.89361 * 7 6 4 29 29 H 1.08998 * 109.55400 * 163.19077 * 7 6 4 30 30 H 1.08995 * 108.33895 * 28.38398 * 8 7 6 31 31 H 1.08993 * 108.34057 * 145.60853 * 8 7 6 32 32 H 1.08996 * 109.02933 * 187.05121 * 9 8 7 33 33 H 1.09001 * 109.02289 * 305.88754 * 9 8 7 34 34 H 1.08992 * 109.35055 * 49.33115 * 10 9 8 35 35 H 1.08994 * 109.35278 * 169.04454 * 10 9 8 36 36 H 1.09001 * 109.47457 * 171.68798 * 12 11 10 37 37 H 1.09007 * 109.47247 * 291.68737 * 12 11 10 38 38 H 1.09000 * 109.47285 * 51.68174 * 12 11 10 39 39 H 1.09004 * 109.47053 * 299.02481 * 13 11 10 40 40 H 1.08997 * 109.47311 * 59.02285 * 13 11 10 41 41 H 1.09000 * 109.47161 * 179.02755 * 13 11 10 42 42 H 1.09002 * 109.63687 * 262.09204 * 14 6 4 43 43 H 1.08997 * 109.64117 * 22.49858 * 14 6 4 44 44 H 1.08005 * 126.45372 * 179.76224 * 15 3 2 45 45 H 1.09003 * 109.47223 * 186.99068 * 19 18 16 46 46 H 0.96693 * 114.00351 * 59.99911 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 0.6307 2.7663 0.1456 6 7 2.7015 3.5120 -0.1596 7 6 4.1192 3.2442 -0.2779 8 6 4.6812 2.9370 1.1005 9 6 5.2361 4.0906 1.8206 10 6 4.1414 5.1134 2.1921 11 14 3.5312 5.9858 0.6734 12 6 4.9702 6.3174 -0.4625 13 6 2.7490 7.6057 1.1579 14 6 2.2649 4.9278 -0.2216 15 6 3.5781 0.6892 -0.0061 16 6 3.5530 -0.7094 -0.0009 17 35 5.0610 -1.8502 -0.0026 18 6 2.2559 -1.1014 -0.0006 19 6 1.7715 -2.5285 -0.0004 20 8 2.3857 -3.2402 -1.0765 21 14 2.2223 -3.3371 1.6164 22 1 1.5860 -2.5959 2.7349 23 1 1.7425 -4.7425 1.6176 24 1 3.6974 -3.3174 1.7852 25 1 -0.3634 0.1003 -1.0228 26 1 -0.3633 -0.9359 0.4245 27 1 -0.3633 0.8356 0.5982 28 1 4.2752 2.3882 -0.9344 29 1 4.6225 4.1186 -0.6904 30 1 3.8853 2.5048 1.7069 31 1 5.4697 2.1924 0.9913 32 1 5.7200 3.7411 2.7326 33 1 5.9794 4.5788 1.1903 34 1 3.3090 4.5948 2.6676 35 1 4.5530 5.8473 2.8849 36 1 4.6009 6.6945 -1.4162 37 1 5.6279 7.0589 -0.0088 38 1 5.5238 5.3930 -0.6270 39 1 1.9008 7.4171 1.8160 40 1 3.4822 8.2221 1.6778 41 1 2.4062 8.1255 0.2633 42 1 2.1933 5.2438 -1.2623 43 1 1.2931 5.0329 0.2608 44 1 4.4582 1.3152 -0.0113 45 1 0.6887 -2.5447 -0.1252 46 1 3.3512 -3.2666 -1.0302 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946170_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:45:27 Heat of formation + Delta-G solvation = -20.213632 kcal Electronic energy + Delta-G solvation = -27556.064379 eV Core-core repulsion = 23845.770924 eV Total energy + Delta-G solvation = -3710.293455 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 388.073 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.97448 -40.62614 -38.34627 -37.86135 -35.04711 -34.38077 -32.39157 -31.10458 -30.18644 -29.47546 -28.63564 -28.13884 -27.26408 -26.06192 -25.37302 -22.68906 -22.12126 -20.86152 -20.05728 -18.72195 -18.03976 -17.72878 -17.06466 -16.70972 -16.49407 -16.02521 -15.74808 -15.56995 -15.12634 -14.88659 -14.62206 -14.47868 -14.34681 -14.23199 -14.15635 -14.01562 -13.90209 -13.83463 -13.52465 -13.41509 -13.26397 -13.15010 -12.73201 -12.68018 -12.63229 -12.38083 -12.19301 -11.86739 -11.69217 -11.68280 -11.29513 -10.99956 -10.95806 -10.82382 -10.75048 -10.58111 -9.72658 -9.55555 -9.15747 0.23938 0.57657 0.87488 1.20777 1.35136 1.42786 1.50029 1.54265 1.65922 1.74709 1.93335 2.26042 2.28068 2.40815 3.19540 3.39724 3.48001 3.60530 3.67305 3.87939 3.90351 3.93010 4.17737 4.27366 4.28633 4.36659 4.46235 4.48589 4.56161 4.59571 4.61073 4.62874 4.64613 4.67199 4.71439 4.80855 4.86217 4.94027 5.11879 5.23986 5.29838 5.33386 5.38711 5.43431 5.52090 5.65548 5.86471 6.30952 6.32944 7.12232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.388 5.388 3 C -0.032 4.032 4 C 0.589 3.411 5 O -0.545 6.545 6 N -0.576 5.576 7 C 0.061 3.939 8 C -0.153 4.153 9 C -0.104 4.104 10 C -0.410 4.410 11 Si 1.013 2.987 12 C -0.456 4.456 13 C -0.449 4.449 14 C -0.181 4.181 15 C -0.133 4.133 16 C -0.180 4.180 17 Br -0.019 7.019 18 C 0.055 3.945 19 C -0.063 4.063 20 O -0.528 6.528 21 Si 0.927 3.073 22 H -0.246 1.246 23 H -0.238 1.238 24 H -0.217 1.217 25 H 0.085 0.915 26 H 0.088 0.912 27 H 0.109 0.891 28 H 0.099 0.901 29 H 0.104 0.896 30 H 0.074 0.926 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.075 0.925 35 H 0.078 0.922 36 H 0.072 0.928 37 H 0.075 0.925 38 H 0.077 0.923 39 H 0.071 0.929 40 H 0.073 0.927 41 H 0.072 0.928 42 H 0.074 0.926 43 H 0.097 0.903 44 H 0.186 0.814 45 H 0.120 0.880 46 H 0.376 0.624 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.732 1.954 0.783 3.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.061 5.061 3 C -0.146 4.146 4 C 0.379 3.621 5 O -0.424 6.424 6 N -0.307 5.307 7 C -0.062 4.062 8 C -0.192 4.192 9 C -0.142 4.142 10 C -0.497 4.497 11 Si 1.207 2.793 12 C -0.563 4.563 13 C -0.557 4.557 14 C -0.349 4.349 15 C -0.159 4.159 16 C -0.266 4.266 17 Br 0.065 6.935 18 C -0.067 4.067 19 C -0.173 4.173 20 O -0.335 6.335 21 Si 0.743 3.257 22 H -0.169 1.169 23 H -0.160 1.160 24 H -0.139 1.139 25 H 0.103 0.897 26 H 0.107 0.893 27 H 0.128 0.872 28 H 0.117 0.883 29 H 0.121 0.879 30 H 0.092 0.908 31 H 0.097 0.903 32 H 0.086 0.914 33 H 0.085 0.915 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.091 0.909 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.092 0.908 43 H 0.115 0.885 44 H 0.202 0.798 45 H 0.138 0.862 46 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 1.827 1.187 1.439 2.611 hybrid contribution -0.075 0.567 -0.405 0.701 sum 1.752 1.754 1.034 2.686 Atomic orbital electron populations 1.22442 0.75022 1.05502 1.05135 1.43750 1.07128 1.03880 1.51381 1.20035 0.89700 0.87772 1.17120 1.16839 0.85283 0.83069 0.76957 1.90794 1.16300 1.84291 1.51015 1.47186 1.06322 1.05635 1.71591 1.22134 0.81048 1.04900 0.98079 1.21056 1.02048 0.99711 0.96344 1.20224 0.97846 0.95502 1.00594 1.26263 1.03399 1.05336 1.14660 0.79495 0.66282 0.66305 0.67253 1.26486 1.13866 1.05421 1.10509 1.26084 1.07588 1.16183 1.05865 1.27175 1.12673 0.86620 1.08387 1.22513 0.96720 0.92950 1.03731 1.20753 0.90759 0.94856 1.20224 1.96622 1.36569 1.62266 1.98083 1.20876 0.89661 0.90016 1.06141 1.24709 1.01995 0.87300 1.03287 1.86543 1.25702 1.74248 1.47041 0.85953 0.84569 0.81012 0.74168 1.16949 1.16047 1.13891 0.89676 0.89317 0.87210 0.88287 0.87853 0.90769 0.90259 0.91429 0.91497 0.90638 0.90317 0.90901 0.90586 0.90466 0.90990 0.90753 0.90910 0.90770 0.88457 0.79775 0.86184 0.77323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.01 10.24 59.85 0.61 0.62 16 2 N -0.39 -0.83 3.16 -115.59 -0.37 -1.19 16 3 C -0.03 -0.08 6.56 -81.98 -0.54 -0.62 16 4 C 0.59 1.87 7.23 -12.86 -0.09 1.78 16 5 O -0.54 -3.18 14.39 5.18 0.07 -3.11 16 6 N -0.58 -0.23 2.61 -114.45 -0.30 -0.53 16 7 C 0.06 -0.12 4.76 -5.48 -0.03 -0.15 16 8 C -0.15 0.34 3.53 -30.17 -0.11 0.23 16 9 C -0.10 0.27 5.28 -28.95 -0.15 0.11 16 10 C -0.41 0.91 4.74 37.87 0.18 1.09 16 11 Si 1.01 -3.37 10.36 -169.99 -1.76 -5.13 16 12 C -0.46 1.56 7.86 101.05 0.79 2.35 16 13 C -0.45 1.01 8.65 101.05 0.87 1.88 16 14 C -0.18 0.13 5.35 60.83 0.33 0.46 16 15 C -0.13 -0.14 7.76 -39.10 -0.30 -0.44 16 16 C -0.18 -0.29 6.10 -39.94 -0.24 -0.53 16 17 Br -0.02 -0.01 29.00 -68.01 -1.97 -1.98 16 18 C 0.05 0.10 5.29 -81.90 -0.43 -0.33 16 19 C -0.06 -0.04 2.77 36.01 0.10 0.06 16 20 O -0.53 -0.98 12.87 -35.23 -0.45 -1.43 16 21 Si 0.93 0.19 26.94 -169.99 -4.58 -4.39 16 22 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 23 H -0.24 -0.18 7.11 56.52 0.40 0.23 16 24 H -0.22 -0.04 5.88 56.52 0.33 0.29 16 25 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.09 -0.21 6.84 -51.93 -0.36 -0.57 16 27 H 0.11 0.14 6.49 -51.93 -0.34 -0.20 16 28 H 0.10 -0.22 5.17 -51.93 -0.27 -0.49 16 29 H 0.10 -0.38 3.52 -51.93 -0.18 -0.57 16 30 H 0.07 -0.03 6.67 -51.93 -0.35 -0.38 16 31 H 0.08 -0.26 7.03 -51.93 -0.37 -0.63 16 32 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 33 H 0.07 -0.25 6.39 -51.93 -0.33 -0.58 16 34 H 0.07 -0.07 7.91 -51.93 -0.41 -0.48 16 35 H 0.08 -0.20 7.94 -51.93 -0.41 -0.61 16 36 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 37 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 38 H 0.08 -0.30 4.88 -51.93 -0.25 -0.56 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 41 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 42 H 0.07 -0.10 7.98 -51.93 -0.41 -0.51 16 43 H 0.10 0.07 7.17 -51.93 -0.37 -0.30 16 44 H 0.19 -0.24 2.65 -52.48 -0.14 -0.37 16 45 H 0.12 -0.14 6.48 -51.93 -0.34 -0.47 16 46 H 0.38 0.18 5.93 45.56 0.27 0.45 16 LS Contribution 354.69 15.07 5.35 5.35 Total: 0.00 -6.49 354.69 -9.05 -15.54 By element: Atomic # 1 Polarization: -3.60 SS G_CDS: -6.03 Total: -9.64 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 0.99 Total: 6.52 kcal Atomic # 7 Polarization: -1.06 SS G_CDS: -0.66 Total: -1.72 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.38 Total: -4.54 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: -6.34 Total: -9.52 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -1.97 Total: -1.98 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -6.49 -9.05 -15.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946170_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.670 kcal (2) G-P(sol) polarization free energy of solvation -6.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.214 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds