Wall clock time and date at job start Sun Mar 7 2021 14:57:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86297 * 109.47322 * 2 1 4 4 C 1.50709 * 109.47195 * 239.99922 * 2 1 3 5 5 C 1.34842 * 125.89016 * 119.95583 * 4 2 1 6 6 C 1.40892 * 107.41810 * 179.80349 * 5 4 2 7 7 C 1.34853 * 107.41373 * 0.38707 * 6 5 4 8 8 C 1.50700 * 125.89110 * 179.88592 * 7 6 5 9 9 C 1.50704 * 109.47149 * 274.68498 * 8 7 6 10 10 O 1.21280 * 119.99679 * 359.97438 * 9 8 7 11 11 N 1.34775 * 120.00152 * 179.97438 * 9 8 7 12 12 C 1.46499 * 119.99727 * 179.97438 * 11 9 8 13 13 C 1.53000 * 109.46743 * 179.97438 * 12 11 9 14 14 H 1.08994 * 112.85621 * 316.19927 * 13 12 11 15 15 C 1.54053 * 113.61639 * 87.50997 * 13 12 11 16 16 C 1.53781 * 86.98601 * 139.97520 * 15 13 12 17 17 H 1.08999 * 113.61373 * 219.97573 * 16 15 13 18 18 N 1.46502 * 113.61397 * 89.16131 * 16 15 13 19 19 C 1.34953 * 126.03718 * 345.86354 * 18 16 15 20 20 C 1.35312 * 107.74266 * 180.24977 * 19 18 16 21 21 C 1.39863 * 107.92527 * 359.64076 * 20 19 18 22 22 N 1.30837 * 108.19940 * 0.36269 * 21 20 19 23 23 C 1.53776 * 87.17473 * 334.56990 * 16 15 13 24 24 N 1.36336 * 108.21790 * 359.61456 * 7 6 5 25 25 H 0.96710 * 114.00106 * 60.00021 * 1 2 3 26 26 H 1.09005 * 109.47197 * 120.00198 * 2 1 3 27 27 H 1.48497 * 110.00050 * 59.99583 * 3 2 1 28 28 H 1.48503 * 110.00308 * 181.32139 * 3 2 1 29 29 H 1.08007 * 126.29247 * 0.06157 * 5 4 2 30 30 H 1.07994 * 126.29563 * 180.23666 * 6 5 4 31 31 H 1.08995 * 109.47582 * 154.68368 * 8 7 6 32 32 H 1.09007 * 109.47139 * 34.68205 * 8 7 6 33 33 H 0.97003 * 119.99948 * 0.02562 * 11 9 8 34 34 H 1.09003 * 109.46812 * 60.00457 * 12 11 9 35 35 H 1.08994 * 109.47225 * 300.00181 * 12 11 9 36 36 H 1.09001 * 113.61657 * 25.46737 * 15 13 12 37 37 H 1.09000 * 113.69409 * 254.49272 * 15 13 12 38 38 H 1.08002 * 126.12372 * 359.97438 * 19 18 16 39 39 H 1.08008 * 126.03698 * 179.76435 * 20 19 18 40 40 H 1.08001 * 125.90034 * 180.14354 * 21 20 19 41 41 H 1.09000 * 113.61686 * 140.02016 * 23 16 15 42 42 H 1.09002 * 113.61197 * 270.84760 * 23 16 15 43 43 H 0.97000 * 125.63822 * 180.27099 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7091 -0.1725 -2.1917 6 6 2.9482 -1.1759 -3.1515 7 6 2.3002 -2.2863 -2.7444 8 6 2.2748 -3.6090 -3.4662 9 6 1.1814 -3.5945 -4.5032 10 8 0.4905 -2.6075 -4.6420 11 7 0.9713 -4.6784 -5.2762 12 6 -0.0920 -4.6644 -6.2838 13 6 -0.1169 -6.0068 -7.0175 14 1 0.8785 -6.3620 -7.2842 15 6 -0.9895 -7.0718 -6.3264 16 6 -1.4549 -7.4858 -7.7324 17 1 -2.5170 -7.7241 -7.7882 18 7 -0.6091 -8.5085 -8.3531 19 6 0.6182 -8.8839 -7.9361 20 6 1.0629 -9.8464 -8.7769 21 6 0.0701 -10.0727 -9.7357 22 7 -0.9314 -9.2691 -9.4844 23 6 -1.1203 -6.0538 -8.1820 24 7 1.6770 -2.0077 -1.5643 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5614 2.4679 1.2084 28 1 3.5346 1.7703 -0.0322 29 1 3.0838 0.8401 -2.2187 30 1 3.5394 -1.0738 -4.0494 31 1 2.0867 -4.4097 -2.7510 32 1 3.2356 -3.7755 -3.9535 33 1 1.5237 -5.4680 -5.1648 34 1 0.0956 -3.8634 -6.9989 35 1 -1.0525 -4.4986 -5.7961 36 1 -1.7840 -6.6521 -5.7094 37 1 -0.4151 -7.8422 -5.8121 38 1 1.1520 -8.4842 -7.0865 39 1 2.0153 -10.3521 -8.7168 40 1 0.1226 -10.7849 -10.5458 41 1 -0.6513 -6.0030 -9.1647 42 1 -1.9509 -5.3566 -8.0727 43 1 1.1415 -2.6297 -1.0473 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:57:38 Heat of formation + Delta-G solvation = 89.771603 kcal Electronic energy + Delta-G solvation = -25306.479181 eV Core-core repulsion = 21549.911907 eV Total energy + Delta-G solvation = -3756.567275 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.49175 -42.29086 -40.72310 -39.72967 -37.66535 -35.68515 -33.31132 -32.36390 -31.86765 -31.04900 -29.88572 -28.40910 -27.13835 -25.33571 -24.41681 -22.41210 -21.93132 -21.75527 -21.29805 -20.98581 -20.41677 -18.95889 -18.27367 -17.98236 -17.48629 -16.79274 -16.71074 -16.32456 -16.21711 -15.81126 -15.60688 -15.24009 -15.09260 -14.79398 -14.58072 -14.53180 -14.16609 -14.04538 -14.00940 -13.86696 -13.75382 -13.47417 -13.44701 -13.11848 -12.76713 -12.31670 -12.00993 -11.91961 -11.89130 -11.79639 -11.56631 -10.92095 -10.60812 -10.36746 -10.18609 -9.72596 -9.55186 -8.90808 -4.94651 0.90861 1.13489 1.30376 1.41854 1.59405 1.70086 1.90269 1.92750 1.95895 2.24575 2.48753 2.97054 3.09176 3.34895 3.44776 3.46815 3.60521 3.76033 3.83378 3.85369 3.92408 3.96568 3.99729 4.20373 4.29049 4.32245 4.36368 4.42409 4.45685 4.57748 4.58292 4.61676 4.70122 4.76077 4.81110 4.84977 4.94767 5.08283 5.29154 5.31303 5.34469 5.70909 6.04389 6.05380 6.18763 6.34553 6.54535 6.65107 6.76557 7.15868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.049 4.049 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.188 4.188 6 C -0.173 4.173 7 C 0.035 3.965 8 C -0.072 4.072 9 C 0.510 3.490 10 O -0.521 6.521 11 N -0.733 5.733 12 C 0.131 3.869 13 C -0.127 4.127 14 H 0.100 0.900 15 C -0.139 4.139 16 C 0.134 3.866 17 H 0.113 0.887 18 N -0.356 5.356 19 C 0.051 3.949 20 C -0.273 4.273 21 C 0.045 3.955 22 N -0.293 5.293 23 C -0.136 4.136 24 N -0.535 5.535 25 H 0.383 0.617 26 H 0.109 0.891 27 H -0.256 1.256 28 H -0.255 1.255 29 H 0.141 0.859 30 H 0.136 0.864 31 H 0.099 0.901 32 H 0.117 0.883 33 H 0.400 0.600 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.109 0.891 37 H 0.081 0.919 38 H 0.170 0.830 39 H 0.148 0.852 40 H 0.184 0.816 41 H 0.081 0.919 42 H 0.107 0.893 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.139 -2.204 0.007 3.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.160 4.160 3 Si 0.619 3.381 4 C -0.124 4.124 5 C -0.213 4.213 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.112 4.112 9 C 0.296 3.704 10 O -0.396 6.396 11 N -0.387 5.387 12 C 0.008 3.992 13 C -0.146 4.146 14 H 0.118 0.882 15 C -0.177 4.177 16 C 0.031 3.969 17 H 0.131 0.869 18 N -0.138 5.138 19 C -0.095 4.095 20 C -0.302 4.302 21 C -0.141 4.141 22 N -0.114 5.114 23 C -0.175 4.175 24 N -0.130 5.130 25 H 0.231 0.769 26 H 0.127 0.873 27 H -0.181 1.181 28 H -0.179 1.179 29 H 0.159 0.841 30 H 0.154 0.846 31 H 0.117 0.883 32 H 0.135 0.865 33 H 0.234 0.766 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.128 0.872 37 H 0.100 0.900 38 H 0.187 0.813 39 H 0.166 0.834 40 H 0.201 0.799 41 H 0.100 0.900 42 H 0.125 0.875 43 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 0.851 -0.798 0.670 1.345 hybrid contribution 1.004 -1.812 0.561 2.147 sum 1.856 -2.610 1.231 3.431 Atomic orbital electron populations 1.86463 1.17356 1.81854 1.49596 1.24837 0.84988 1.10681 0.95483 0.93947 0.80869 0.76661 0.86577 1.20842 1.05946 0.85414 1.00155 1.20653 1.04693 0.99914 0.96013 1.20590 1.05629 0.92360 1.01162 1.19465 1.02330 0.96496 0.89603 1.20129 0.99721 0.94745 0.96654 1.20601 0.85065 0.82780 0.81969 1.90776 1.47668 1.32551 1.68557 1.45983 1.37071 1.17309 1.38295 1.21332 0.91081 0.96613 0.90214 1.23008 0.99668 0.95108 0.96785 0.88168 1.23574 1.00656 0.98619 0.94842 1.22038 0.95149 0.86197 0.93548 0.86936 1.48395 1.13180 1.29927 1.22310 1.22462 0.87683 0.98542 1.00788 1.21568 1.03167 1.05445 1.00041 1.23974 0.91620 0.98547 0.99961 1.77425 1.23842 1.08445 1.01655 1.23380 0.99741 0.95413 0.98967 1.41778 1.41008 1.11020 1.19175 0.76944 0.87316 1.18055 1.17902 0.84115 0.84592 0.88289 0.86505 0.76573 0.90921 0.90957 0.87228 0.90016 0.81257 0.83397 0.79864 0.89982 0.87515 0.75124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.54 12.88 -35.23 -0.45 -0.99 16 2 C -0.05 -0.02 3.08 36.01 0.11 0.09 16 3 Si 0.72 -0.38 30.58 -169.99 -5.20 -5.58 16 4 C -0.01 -0.01 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.34 9.37 -39.78 -0.37 -0.71 16 6 C -0.17 -0.35 10.77 -39.78 -0.43 -0.78 16 7 C 0.03 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.17 6.24 -29.03 -0.18 -0.02 16 9 C 0.51 -0.05 7.82 -10.98 -0.09 -0.13 16 10 O -0.52 -2.46 16.03 5.56 0.09 -2.37 16 11 N -0.73 2.22 5.56 -60.30 -0.33 1.89 16 12 C 0.13 -0.33 5.51 -4.04 -0.02 -0.36 16 13 C -0.13 0.51 3.32 -89.66 -0.30 0.21 16 14 H 0.10 -0.42 6.87 -51.93 -0.36 -0.78 16 15 C -0.14 0.58 6.90 -25.78 -0.18 0.40 16 16 C 0.13 -0.24 5.18 -67.12 -0.35 -0.58 16 17 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 18 N -0.36 -0.27 3.80 -54.07 -0.21 -0.47 16 19 C 0.05 -0.04 9.61 -17.22 -0.17 -0.20 16 20 C -0.27 -0.05 10.80 -40.02 -0.43 -0.48 16 21 C 0.05 0.07 12.03 -17.37 -0.21 -0.14 16 22 N -0.29 -0.99 12.58 30.62 0.39 -0.61 16 23 C -0.14 0.37 7.44 -25.92 -0.19 0.18 16 24 N -0.54 -0.51 6.07 -5.44 -0.03 -0.54 16 25 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 26 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 27 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 28 H -0.25 -0.45 7.11 56.52 0.40 -0.04 16 29 H 0.14 0.02 6.22 -52.48 -0.33 -0.31 16 30 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 31 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 32 H 0.12 -0.51 8.14 -51.92 -0.42 -0.93 16 33 H 0.40 -2.36 8.47 -40.82 -0.35 -2.70 16 34 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.07 -0.12 7.85 -51.93 -0.41 -0.53 16 36 H 0.11 -0.52 7.90 -51.93 -0.41 -0.93 16 37 H 0.08 -0.37 7.05 -51.93 -0.37 -0.74 16 38 H 0.17 -0.69 6.62 -52.49 -0.35 -1.04 16 39 H 0.15 -0.25 8.06 -52.48 -0.42 -0.68 16 40 H 0.18 -0.21 8.06 -52.49 -0.42 -0.63 16 41 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 42 H 0.11 -0.39 8.10 -51.93 -0.42 -0.81 16 43 H 0.41 -0.27 8.96 -40.82 -0.37 -0.64 16 LS Contribution 361.54 15.07 5.45 5.45 Total: 0.00 -11.19 361.54 -10.04 -21.23 By element: Atomic # 1 Polarization: -8.56 SS G_CDS: -5.94 Total: -14.50 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: -3.80 Total: -3.50 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.19 Total: 0.26 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.36 Total: -3.36 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.20 Total: -5.58 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -11.19 -10.04 -21.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.006 kcal (2) G-P(sol) polarization free energy of solvation -11.190 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.235 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds