Wall clock time and date at job start Sun Mar 7 2021 14:57:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 C 1.53003 * 109.47119 * 179.97438 * 11 10 8 13 13 H 1.09005 * 112.84396 * 43.80977 * 12 11 10 14 14 C 1.53773 * 113.61713 * 175.00118 * 12 11 10 15 15 C 1.53777 * 87.08553 * 139.98570 * 14 12 11 16 16 H 1.08996 * 113.61895 * 220.02049 * 15 14 12 17 17 N 1.46503 * 113.61485 * 89.19638 * 15 14 12 18 18 C 1.34942 * 126.04037 * 275.00745 * 17 15 14 19 19 C 1.35314 * 107.74591 * 179.97438 * 18 17 15 20 20 C 1.39870 * 107.92325 * 359.97438 * 19 18 17 21 21 N 1.30844 * 108.19940 * 359.74115 * 20 19 18 22 22 C 1.53775 * 113.61958 * 272.50340 * 12 11 10 23 23 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 24 24 C 1.38126 * 119.94094 * 0.02562 * 23 5 4 25 25 C 1.38290 * 120.05768 * 359.97408 * 24 23 5 26 26 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 27 27 H 0.96705 * 113.99836 * 60.00232 * 1 2 3 28 28 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 29 29 H 1.48502 * 109.99868 * 60.00019 * 3 2 1 30 30 H 1.48499 * 110.00235 * 181.31812 * 3 2 1 31 31 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 32 32 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 33 33 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 34 34 H 1.09001 * 109.47382 * 300.00216 * 11 10 8 35 35 H 1.09002 * 109.47089 * 60.00599 * 11 10 8 36 36 H 1.09005 * 113.61827 * 254.53665 * 14 12 11 37 37 H 1.09007 * 113.61438 * 25.35150 * 14 12 11 38 38 H 1.08003 * 126.12803 * 359.97438 * 18 17 15 39 39 H 1.08003 * 126.03910 * 180.02562 * 19 18 17 40 40 H 1.07999 * 125.90053 * 180.02562 * 20 19 18 41 41 H 1.08998 * 113.61112 * 334.56896 * 22 12 11 42 42 H 1.09000 * 113.61800 * 105.46505 * 22 12 11 43 43 H 1.07998 * 120.02777 * 179.97438 * 23 5 4 44 44 H 1.08005 * 119.97091 * 180.02562 * 24 23 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 25 24 23 46 46 H 1.07997 * 119.97398 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 6 -0.0256 -8.3150 1.9426 13 1 0.8963 -8.7190 1.5241 14 6 -0.5066 -9.0551 3.2018 15 6 -1.2836 -9.9900 2.2600 16 1 -2.2731 -10.2585 2.6299 17 7 -0.5085 -11.1507 1.8145 18 6 0.3423 -11.1828 0.7675 19 6 0.8547 -12.4328 0.6907 20 6 0.2984 -13.1905 1.7265 21 7 -0.5145 -12.4213 2.4044 22 6 -1.2973 -8.8313 1.2490 23 6 2.3321 -2.7451 -2.4417 24 6 2.8538 -2.0144 -3.4914 25 6 2.9146 -0.6351 -3.4125 26 6 2.4537 0.0160 -2.2834 27 1 -0.3933 0.4417 -0.7651 28 1 1.7924 -0.5139 0.8899 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 0.7154 -4.4922 -1.2892 32 1 2.3361 -4.6058 -0.5620 33 1 0.8812 -6.7545 0.1657 34 1 0.6186 -6.5335 2.9689 35 1 -1.0028 -6.4192 2.2433 36 1 0.2944 -9.5531 3.7483 37 1 -1.1464 -8.4514 3.8455 38 1 0.5729 -10.3585 0.1089 39 1 1.5679 -12.7833 -0.0406 40 1 0.5075 -14.2295 1.9340 41 1 -2.1544 -8.1668 1.3580 42 1 -1.1348 -9.1485 0.2190 43 1 2.2852 -3.8223 -2.5037 44 1 3.2139 -2.5207 -4.3749 45 1 3.3188 -0.0653 -4.2361 46 1 2.5023 1.0932 -2.2241 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:57:51 Heat of formation + Delta-G solvation = 44.522583 kcal Electronic energy + Delta-G solvation = -28836.279955 eV Core-core repulsion = 24696.268114 eV Total energy + Delta-G solvation = -4140.011841 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.49858 -41.62356 -40.73661 -39.82848 -38.46579 -37.38348 -35.77001 -32.81818 -32.54799 -31.41615 -31.05401 -30.16667 -28.14426 -27.14566 -26.62781 -24.76541 -23.47875 -22.63045 -22.43167 -21.84285 -21.56788 -20.43160 -19.49823 -18.56939 -18.03306 -17.91438 -17.57704 -17.21516 -16.91047 -16.61993 -16.45787 -16.16051 -15.81811 -15.58563 -15.51709 -15.36344 -15.01180 -14.92627 -14.66089 -14.51603 -14.08626 -14.02016 -13.82831 -13.72352 -13.49447 -13.46883 -13.08970 -13.04054 -12.41997 -12.34005 -12.23372 -11.98239 -11.93492 -11.82117 -11.69567 -11.57229 -10.92548 -10.37581 -10.28202 -10.26179 -10.03405 -9.55910 -9.25258 -4.98194 0.17088 0.35981 0.90153 1.37432 1.39306 1.41005 1.45199 1.71176 1.91947 2.06543 2.47909 2.63984 2.95313 3.07157 3.30574 3.41572 3.46491 3.57309 3.72720 3.74665 3.75155 3.82213 3.85451 3.87837 3.96062 3.98698 4.17395 4.21939 4.27991 4.29844 4.35805 4.44838 4.47136 4.55359 4.59838 4.65104 4.68066 4.74424 4.83893 4.92258 4.92518 5.07329 5.18681 5.21372 5.27462 5.43319 5.63993 5.70120 6.04552 6.16154 6.31994 6.75737 6.75748 7.03647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.057 4.057 3 Si 0.682 3.318 4 C -0.149 4.149 5 C 0.151 3.849 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.514 3.486 9 O -0.507 6.507 10 N -0.728 5.728 11 C 0.132 3.868 12 C -0.128 4.128 13 H 0.100 0.900 14 C -0.136 4.136 15 C 0.134 3.866 16 H 0.113 0.887 17 N -0.356 5.356 18 C 0.051 3.949 19 C -0.273 4.273 20 C 0.045 3.955 21 N -0.293 5.293 22 C -0.138 4.138 23 C -0.212 4.212 24 C -0.073 4.073 25 C -0.151 4.151 26 C -0.075 4.075 27 H 0.373 0.627 28 H 0.113 0.887 29 H -0.254 1.254 30 H -0.257 1.257 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.401 0.599 34 H 0.074 0.926 35 H 0.076 0.924 36 H 0.082 0.918 37 H 0.107 0.893 38 H 0.170 0.830 39 H 0.148 0.852 40 H 0.184 0.816 41 H 0.111 0.889 42 H 0.082 0.918 43 H 0.129 0.871 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.413 -0.938 -7.396 7.588 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.168 4.168 3 Si 0.584 3.416 4 C -0.150 4.150 5 C 0.105 3.895 6 O -0.190 6.190 7 C -0.040 4.040 8 C 0.299 3.701 9 O -0.380 6.380 10 N -0.383 5.383 11 C 0.009 3.991 12 C -0.146 4.146 13 H 0.119 0.881 14 C -0.175 4.175 15 C 0.031 3.969 16 H 0.131 0.869 17 N -0.138 5.138 18 C -0.095 4.095 19 C -0.302 4.302 20 C -0.141 4.141 21 N -0.113 5.113 22 C -0.177 4.177 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.169 4.169 26 C -0.092 4.092 27 H 0.219 0.781 28 H 0.131 0.869 29 H -0.179 1.179 30 H -0.182 1.182 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.236 0.764 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.100 0.900 37 H 0.126 0.874 38 H 0.187 0.813 39 H 0.166 0.834 40 H 0.201 0.799 41 H 0.129 0.871 42 H 0.100 0.900 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.148 0.852 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.740 0.136 -4.484 4.547 hybrid contribution 1.034 -1.348 -1.194 2.077 sum 1.775 -1.212 -5.678 6.071 Atomic orbital electron populations 1.86605 1.16937 1.81486 1.48576 1.24936 0.85378 1.09261 0.97209 0.95239 0.81038 0.77851 0.87494 1.19739 1.05634 0.91081 0.98565 1.18801 0.93154 0.90854 0.86732 1.86238 1.77379 1.16803 1.38567 1.22464 1.02440 0.81486 0.97570 1.20024 0.79343 0.82407 0.88355 1.90815 1.47148 1.60999 1.39032 1.45781 1.65262 1.06291 1.20967 1.21384 0.99561 0.90724 0.87407 1.22960 0.98864 0.94366 0.98446 0.88142 1.23381 1.00911 0.96928 0.96251 1.22034 0.95370 0.82304 0.97211 0.86888 1.48395 1.33905 1.08708 1.22807 1.22455 0.94291 0.99691 0.93061 1.21566 1.09640 0.93748 1.05267 1.23979 0.95568 1.00231 0.94325 1.77433 1.23237 0.89252 1.21406 1.23530 0.99160 0.95993 0.98974 1.21293 1.06494 1.00423 0.94889 1.21027 0.96287 0.94110 0.97680 1.21082 1.02670 0.94582 0.98596 1.20866 0.96683 0.99132 0.92536 0.78058 0.86915 1.17873 1.18189 0.88777 0.88941 0.76449 0.90746 0.90571 0.89957 0.87450 0.81267 0.83403 0.79861 0.87079 0.89964 0.85307 0.85328 0.85158 0.84670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.58 12.88 -35.23 -0.45 -2.03 16 2 C -0.06 -0.13 2.38 36.01 0.09 -0.04 16 3 Si 0.68 0.17 29.92 -169.99 -5.09 -4.91 16 4 C -0.15 -0.23 5.27 -104.47 -0.55 -0.79 16 5 C 0.15 0.30 6.66 -39.21 -0.26 0.03 16 6 O -0.28 -0.92 9.00 -39.32 -0.35 -1.27 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 8 C 0.51 0.63 7.91 -10.99 -0.09 0.54 16 9 O -0.51 -3.38 16.50 -14.35 -0.24 -3.62 16 10 N -0.73 1.85 5.56 -60.29 -0.33 1.51 16 11 C 0.13 -0.29 5.51 -4.04 -0.02 -0.32 16 12 C -0.13 0.50 3.33 -89.81 -0.30 0.20 16 13 H 0.10 -0.42 6.98 -51.93 -0.36 -0.78 16 14 C -0.14 0.35 7.44 -25.93 -0.19 0.16 16 15 C 0.13 -0.23 5.18 -67.12 -0.35 -0.58 16 16 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 17 N -0.36 -0.28 3.79 -54.07 -0.21 -0.48 16 18 C 0.05 -0.04 9.63 -17.23 -0.17 -0.20 16 19 C -0.27 -0.05 10.80 -40.01 -0.43 -0.48 16 20 C 0.05 0.07 12.03 -17.36 -0.21 -0.14 16 21 N -0.29 -1.00 12.58 30.63 0.39 -0.61 16 22 C -0.14 0.58 6.88 -25.92 -0.18 0.40 16 23 C -0.21 0.08 9.04 -39.43 -0.36 -0.27 16 24 C -0.07 0.08 10.04 -39.60 -0.40 -0.32 16 25 C -0.15 0.17 10.04 -39.56 -0.40 -0.23 16 26 C -0.07 0.04 8.66 -39.61 -0.34 -0.30 16 27 H 0.37 -0.60 8.70 45.56 0.40 -0.20 16 28 H 0.11 0.49 7.83 -51.93 -0.41 0.08 16 29 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 30 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 31 H 0.09 -0.33 7.66 -51.93 -0.40 -0.72 16 32 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 33 H 0.40 -2.34 8.47 -40.82 -0.35 -2.68 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.08 -0.11 7.84 -51.93 -0.41 -0.52 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 37 H 0.11 -0.38 8.10 -51.92 -0.42 -0.80 16 38 H 0.17 -0.70 6.67 -52.48 -0.35 -1.05 16 39 H 0.15 -0.26 8.06 -52.48 -0.42 -0.68 16 40 H 0.18 -0.21 8.06 -52.49 -0.42 -0.63 16 41 H 0.11 -0.52 7.89 -51.93 -0.41 -0.93 16 42 H 0.08 -0.38 6.98 -51.93 -0.36 -0.74 16 43 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 44 H 0.13 -0.41 8.06 -52.48 -0.42 -0.84 16 45 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 46 H 0.14 -0.40 5.13 -52.49 -0.27 -0.67 16 LS Contribution 383.34 15.07 5.78 5.78 Total: 0.00 -12.89 383.34 -10.70 -23.59 By element: Atomic # 1 Polarization: -9.54 SS G_CDS: -6.22 Total: -15.76 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -3.97 Total: -2.18 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.15 Total: 0.42 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -1.04 Total: -6.93 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: -5.09 Total: -4.91 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -12.89 -10.70 -23.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.110 kcal (2) G-P(sol) polarization free energy of solvation -12.890 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.220 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.587 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds