Wall clock time and date at job start Sun Mar 7 2021 14:57:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47567 * 2 1 4 4 C 1.50700 * 109.47370 * 120.00408 * 2 1 3 5 5 C 1.38264 * 119.94418 * 64.99319 * 4 2 1 6 6 C 1.38143 * 120.05956 * 180.02562 * 5 4 2 7 7 C 1.38740 * 119.93679 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05082 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99801 * 179.97438 * 8 7 6 10 10 C 1.50705 * 109.46943 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00226 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99857 * 180.02562 * 10 9 8 13 13 C 1.46493 * 119.99981 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47111 * 180.02562 * 13 12 10 15 15 H 1.08997 * 112.91098 * 43.75037 * 14 13 12 16 16 C 1.53781 * 113.61480 * 175.00222 * 14 13 12 17 17 C 1.53786 * 87.17350 * 139.93948 * 16 14 13 18 18 H 1.09000 * 113.61138 * 220.06261 * 17 16 14 19 19 N 1.46496 * 113.61518 * 89.15486 * 17 16 14 20 20 C 1.34940 * 126.03909 * 274.71783 * 19 17 16 21 21 C 1.35320 * 107.74475 * 179.84251 * 20 19 17 22 22 C 1.39864 * 107.92130 * 0.41836 * 21 20 19 23 23 N 1.30835 * 108.20276 * 359.74258 * 22 21 20 24 24 C 1.53782 * 113.61259 * 272.50057 * 14 13 12 25 25 C 1.38732 * 119.89306 * 0.26796 * 7 6 5 26 26 C 1.38144 * 119.93653 * 359.43524 * 25 7 6 27 27 H 0.96708 * 113.99413 * 299.99913 * 1 2 3 28 28 H 1.09005 * 109.46594 * 240.00111 * 2 1 3 29 29 H 1.48495 * 110.00220 * 178.68568 * 3 2 1 30 30 H 1.48506 * 109.99735 * 300.00560 * 3 2 1 31 31 H 1.08003 * 119.97455 * 359.97438 * 5 4 2 32 32 H 1.07992 * 120.03397 * 180.02562 * 6 5 4 33 33 H 1.08994 * 109.46745 * 60.00390 * 9 8 7 34 34 H 1.08995 * 109.47268 * 300.00594 * 9 8 7 35 35 H 0.97001 * 119.99565 * 0.02562 * 12 10 9 36 36 H 1.08994 * 109.47006 * 60.00362 * 13 12 10 37 37 H 1.09002 * 109.47617 * 299.99816 * 13 12 10 38 38 H 1.09002 * 113.61445 * 254.52948 * 16 14 13 39 39 H 1.09002 * 113.61408 * 25.34678 * 16 14 13 40 40 H 1.07994 * 126.13032 * 359.97438 * 20 19 17 41 41 H 1.08005 * 126.04287 * 180.16316 * 21 20 19 42 42 H 1.08000 * 125.90543 * 179.71753 * 22 21 20 43 43 H 1.08997 * 113.61668 * 334.56352 * 24 14 13 44 44 H 1.08994 * 113.61387 * 105.47087 * 24 14 13 45 45 H 1.07994 * 120.02914 * 179.71935 * 25 7 6 46 46 H 1.08005 * 119.96915 * 180.27282 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3971 6 6 2.1430 -2.7141 2.5243 7 6 2.8523 -2.0143 3.4898 8 8 3.3044 -2.6548 4.5998 9 6 4.0277 -1.8716 5.5514 10 6 4.4467 -2.7447 6.7061 11 8 4.1550 -3.9219 6.7132 12 7 5.1455 -2.2174 7.7308 13 6 5.5522 -3.0660 8.8535 14 6 6.3256 -2.2272 9.8728 15 1 5.8626 -1.2593 10.0646 16 6 6.6946 -2.9976 11.1516 17 6 8.0537 -2.2797 11.1008 18 1 8.8956 -2.9198 11.3644 19 7 8.0673 -0.9982 11.8104 20 6 7.6858 0.1933 11.3048 21 6 7.8458 1.1232 12.2748 22 6 8.3512 0.4794 13.4090 23 7 8.4844 -0.7923 13.1318 24 6 7.8335 -2.1420 9.5832 25 6 3.0940 -0.6584 3.3230 26 6 2.6381 -0.0110 2.1911 27 1 -0.3933 0.4417 0.7652 28 1 1.7923 -0.5139 -0.8901 29 1 3.5347 1.7701 0.0320 30 1 1.5615 2.4678 -1.2085 31 1 1.1307 -2.6046 0.6459 32 1 1.9499 -3.7687 2.6539 33 1 3.3916 -1.0656 5.9170 34 1 4.9128 -1.4487 5.0762 35 1 5.3784 -1.2758 7.7252 36 1 6.1886 -3.8718 8.4879 37 1 4.6671 -3.4892 9.3285 38 1 6.0888 -2.7250 12.0157 39 1 6.7646 -4.0757 11.0069 40 1 7.3167 0.3724 10.3059 41 1 7.6264 2.1771 12.1873 42 1 8.5905 0.9506 14.3509 43 1 8.2163 -2.9860 9.0095 44 1 8.1472 -1.1786 9.1813 45 1 3.6419 -0.1106 4.0753 46 1 2.8298 1.0436 2.0586 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:57:54 Heat of formation + Delta-G solvation = 42.827068 kcal Electronic energy + Delta-G solvation = -28188.161706 eV Core-core repulsion = 24048.076342 eV Total energy + Delta-G solvation = -4140.085364 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.50864 -41.59686 -40.75399 -39.88140 -38.96811 -37.15926 -35.81684 -32.71814 -32.36136 -31.80673 -31.08514 -30.40195 -28.27246 -27.16555 -26.24697 -24.77921 -23.93435 -22.45306 -22.43803 -21.87541 -21.62245 -20.45321 -19.56668 -18.67142 -18.19912 -18.02163 -17.61067 -17.24830 -16.92265 -16.55028 -16.52640 -16.07262 -15.94903 -15.64520 -15.57711 -15.54572 -15.02286 -14.76522 -14.69224 -14.53641 -14.29108 -14.04247 -13.84474 -13.77623 -13.61247 -13.49553 -13.46864 -13.09804 -12.37072 -12.26556 -12.16580 -12.08634 -11.95865 -11.84327 -11.79247 -11.58510 -10.98970 -10.44475 -10.38795 -10.32910 -10.09462 -9.57010 -9.27030 -5.08757 0.24247 0.25039 0.88992 1.26380 1.33930 1.39151 1.39780 1.58808 1.90958 1.94134 2.43560 2.61282 2.92722 3.04843 3.27808 3.38966 3.42209 3.46245 3.62919 3.68002 3.73767 3.79247 3.81437 3.82530 3.85609 3.94499 4.15491 4.21578 4.25703 4.33522 4.38882 4.42840 4.46615 4.52972 4.57282 4.60246 4.66091 4.72713 4.82635 4.89913 4.90304 5.06254 5.09603 5.15041 5.19742 5.46256 5.62820 5.69044 6.03360 6.12154 6.27686 6.55932 6.74639 6.97610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.511 6.511 12 N -0.727 5.727 13 C 0.132 3.868 14 C -0.128 4.128 15 H 0.101 0.899 16 C -0.136 4.136 17 C 0.133 3.867 18 H 0.113 0.887 19 N -0.356 5.356 20 C 0.051 3.949 21 C -0.273 4.273 22 C 0.045 3.955 23 N -0.293 5.293 24 C -0.139 4.139 25 C -0.206 4.206 26 C -0.074 4.074 27 H 0.379 0.621 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.134 0.866 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.402 0.598 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.082 0.918 39 H 0.107 0.893 40 H 0.170 0.830 41 H 0.148 0.852 42 H 0.184 0.816 43 H 0.110 0.890 44 H 0.082 0.918 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.018 5.552 1.362 5.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.587 3.413 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.299 3.701 11 O -0.384 6.384 12 N -0.382 5.382 13 C 0.009 3.991 14 C -0.146 4.146 15 H 0.119 0.881 16 C -0.174 4.174 17 C 0.031 3.969 18 H 0.131 0.869 19 N -0.138 5.138 20 C -0.095 4.095 21 C -0.302 4.302 22 C -0.141 4.141 23 N -0.113 5.113 24 C -0.177 4.177 25 C -0.225 4.225 26 C -0.092 4.092 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.152 0.848 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.236 0.764 36 H 0.094 0.906 37 H 0.093 0.907 38 H 0.101 0.899 39 H 0.125 0.875 40 H 0.187 0.813 41 H 0.166 0.834 42 H 0.201 0.799 43 H 0.129 0.871 44 H 0.100 0.900 45 H 0.150 0.850 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.711 3.470 0.812 3.953 hybrid contribution 0.098 1.004 -0.361 1.072 sum 1.809 4.474 0.451 4.847 Atomic orbital electron populations 1.86513 1.17161 1.81699 1.49227 1.24982 0.85197 1.09883 0.97398 0.94880 0.80930 0.78176 0.87353 1.20255 1.02511 0.95190 0.97807 1.20868 0.96330 0.93475 0.96201 1.20542 1.01192 1.01097 0.93538 1.19076 0.94382 0.91000 0.86720 1.86177 1.68550 1.36603 1.28722 1.22466 0.97912 0.94026 0.89466 1.20040 0.78462 0.88492 0.83067 1.90802 1.53234 1.16213 1.78193 1.45782 1.57470 1.13664 1.21275 1.21390 0.99400 0.92921 0.85395 1.22957 0.95284 1.00472 0.95908 0.88089 1.23377 0.95685 1.00731 0.97649 1.22070 1.00113 0.82666 0.92098 0.86890 1.48388 1.49557 1.06200 1.09687 1.22452 1.01174 0.85677 1.00197 1.21569 1.13705 1.00938 0.93987 1.23977 0.99029 0.91069 1.00018 1.77433 1.21763 1.18476 0.93664 1.23566 0.95634 1.04576 0.93921 1.21166 1.06958 0.93623 1.00759 1.20764 0.96439 0.98997 0.92980 0.77398 0.87001 1.18326 1.17968 0.84783 0.84621 0.88624 0.88725 0.76368 0.90571 0.90666 0.89929 0.87467 0.81255 0.83391 0.79862 0.87133 0.89958 0.85041 0.85276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.05 12.83 -35.23 -0.45 -0.50 16 2 C -0.06 0.03 2.80 36.01 0.10 0.13 16 3 Si 0.68 -1.02 29.80 -169.99 -5.07 -6.08 16 4 C -0.16 0.02 5.35 -104.60 -0.56 -0.54 16 5 C -0.05 -0.03 9.68 -39.61 -0.38 -0.41 16 6 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 7 C 0.13 0.15 6.69 -39.21 -0.26 -0.12 16 8 O -0.29 -0.60 9.67 -39.34 -0.38 -0.98 16 9 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.51 0.08 7.91 -10.98 -0.09 -0.01 16 11 O -0.51 -2.79 16.50 -14.35 -0.24 -3.03 16 12 N -0.73 2.49 5.56 -60.30 -0.33 2.16 16 13 C 0.13 -0.39 5.51 -4.04 -0.02 -0.42 16 14 C -0.13 0.58 3.34 -89.80 -0.30 0.28 16 15 H 0.10 -0.49 7.01 -51.93 -0.36 -0.85 16 16 C -0.14 0.42 7.43 -25.92 -0.19 0.23 16 17 C 0.13 -0.29 5.19 -67.02 -0.35 -0.64 16 18 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 19 N -0.36 -0.14 3.79 -53.98 -0.20 -0.34 16 20 C 0.05 -0.06 9.63 -17.23 -0.17 -0.22 16 21 C -0.27 0.05 10.80 -40.01 -0.43 -0.39 16 22 C 0.05 0.05 12.03 -17.37 -0.21 -0.15 16 23 N -0.29 -0.90 12.58 30.62 0.39 -0.52 16 24 C -0.14 0.65 6.88 -25.82 -0.18 0.47 16 25 C -0.21 0.22 9.04 -39.43 -0.36 -0.13 16 26 C -0.07 0.09 8.66 -39.61 -0.34 -0.25 16 27 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 28 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 29 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 30 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 31 H 0.13 -0.02 8.06 -52.48 -0.42 -0.44 16 32 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 33 H 0.10 -0.45 7.65 -51.93 -0.40 -0.85 16 34 H 0.09 -0.43 7.68 -51.93 -0.40 -0.83 16 35 H 0.40 -2.69 8.47 -40.82 -0.35 -3.03 16 36 H 0.08 -0.17 7.84 -51.93 -0.41 -0.58 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.11 -0.44 8.10 -51.93 -0.42 -0.86 16 40 H 0.17 -0.78 6.68 -52.49 -0.35 -1.13 16 41 H 0.15 -0.31 8.06 -52.48 -0.42 -0.73 16 42 H 0.18 -0.26 8.06 -52.49 -0.42 -0.68 16 43 H 0.11 -0.58 7.90 -51.93 -0.41 -0.99 16 44 H 0.08 -0.42 6.96 -51.93 -0.36 -0.78 16 45 H 0.13 -0.52 6.30 -52.49 -0.33 -0.85 16 46 H 0.13 -0.44 4.90 -52.48 -0.26 -0.70 16 LS Contribution 383.88 15.07 5.79 5.79 Total: 0.00 -12.15 383.88 -10.67 -22.82 By element: Atomic # 1 Polarization: -10.45 SS G_CDS: -6.22 Total: -16.66 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -3.94 Total: -2.65 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.15 Total: 1.30 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -1.07 Total: -4.50 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.07 Total: -6.08 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -12.15 -10.67 -22.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.646 kcal (2) G-P(sol) polarization free energy of solvation -12.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.819 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds