Wall clock time and date at job start Sun Mar 7 2021 14:57:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47567 * 2 1 4 4 C 1.50700 * 109.47370 * 120.00408 * 2 1 3 5 5 C 1.38264 * 119.94418 * 64.99319 * 4 2 1 6 6 C 1.38143 * 120.05956 * 180.02562 * 5 4 2 7 7 C 1.38740 * 119.93679 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05082 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99801 * 179.97438 * 8 7 6 10 10 C 1.50705 * 109.46943 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00226 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99857 * 180.02562 * 10 9 8 13 13 C 1.46493 * 119.99981 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47111 * 180.02562 * 13 12 10 15 15 H 1.08997 * 112.91098 * 43.75037 * 14 13 12 16 16 C 1.53781 * 113.61480 * 175.00222 * 14 13 12 17 17 C 1.53786 * 87.17350 * 139.93948 * 16 14 13 18 18 H 1.09000 * 113.61138 * 220.06261 * 17 16 14 19 19 N 1.46496 * 113.61518 * 89.15486 * 17 16 14 20 20 C 1.34940 * 126.03909 * 274.71783 * 19 17 16 21 21 C 1.35320 * 107.74475 * 179.84251 * 20 19 17 22 22 C 1.39864 * 107.92130 * 0.41836 * 21 20 19 23 23 N 1.30835 * 108.20276 * 359.74258 * 22 21 20 24 24 C 1.53782 * 113.61259 * 272.50057 * 14 13 12 25 25 C 1.38732 * 119.89306 * 0.26796 * 7 6 5 26 26 C 1.38144 * 119.93653 * 359.43524 * 25 7 6 27 27 H 0.96708 * 113.99413 * 299.99913 * 1 2 3 28 28 H 1.09005 * 109.46594 * 240.00111 * 2 1 3 29 29 H 1.48495 * 110.00220 * 178.68568 * 3 2 1 30 30 H 1.48506 * 109.99735 * 300.00560 * 3 2 1 31 31 H 1.08003 * 119.97455 * 359.97438 * 5 4 2 32 32 H 1.07992 * 120.03397 * 180.02562 * 6 5 4 33 33 H 1.08994 * 109.46745 * 60.00390 * 9 8 7 34 34 H 1.08995 * 109.47268 * 300.00594 * 9 8 7 35 35 H 0.97001 * 119.99565 * 0.02562 * 12 10 9 36 36 H 1.08994 * 109.47006 * 60.00362 * 13 12 10 37 37 H 1.09002 * 109.47617 * 299.99816 * 13 12 10 38 38 H 1.09002 * 113.61445 * 254.52948 * 16 14 13 39 39 H 1.09002 * 113.61408 * 25.34678 * 16 14 13 40 40 H 1.07994 * 126.13032 * 359.97438 * 20 19 17 41 41 H 1.08005 * 126.04287 * 180.16316 * 21 20 19 42 42 H 1.08000 * 125.90543 * 179.71753 * 22 21 20 43 43 H 1.08997 * 113.61668 * 334.56352 * 24 14 13 44 44 H 1.08994 * 113.61387 * 105.47087 * 24 14 13 45 45 H 1.07994 * 120.02914 * 179.71935 * 25 7 6 46 46 H 1.08005 * 119.96915 * 180.27282 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3971 6 6 2.1430 -2.7141 2.5243 7 6 2.8523 -2.0143 3.4898 8 8 3.3044 -2.6548 4.5998 9 6 4.0277 -1.8716 5.5514 10 6 4.4467 -2.7447 6.7061 11 8 4.1550 -3.9219 6.7132 12 7 5.1455 -2.2174 7.7308 13 6 5.5522 -3.0660 8.8535 14 6 6.3256 -2.2272 9.8728 15 1 5.8626 -1.2593 10.0646 16 6 6.6946 -2.9976 11.1516 17 6 8.0537 -2.2797 11.1008 18 1 8.8956 -2.9198 11.3644 19 7 8.0673 -0.9982 11.8104 20 6 7.6858 0.1933 11.3048 21 6 7.8458 1.1232 12.2748 22 6 8.3512 0.4794 13.4090 23 7 8.4844 -0.7923 13.1318 24 6 7.8335 -2.1420 9.5832 25 6 3.0940 -0.6584 3.3230 26 6 2.6381 -0.0110 2.1911 27 1 -0.3933 0.4417 0.7652 28 1 1.7923 -0.5139 -0.8901 29 1 3.5347 1.7701 0.0320 30 1 1.5615 2.4678 -1.2085 31 1 1.1307 -2.6046 0.6459 32 1 1.9499 -3.7687 2.6539 33 1 3.3916 -1.0656 5.9170 34 1 4.9128 -1.4487 5.0762 35 1 5.3784 -1.2758 7.7252 36 1 6.1886 -3.8718 8.4879 37 1 4.6671 -3.4892 9.3285 38 1 6.0888 -2.7250 12.0157 39 1 6.7646 -4.0757 11.0069 40 1 7.3167 0.3724 10.3059 41 1 7.6264 2.1771 12.1873 42 1 8.5905 0.9506 14.3509 43 1 8.2163 -2.9860 9.0095 44 1 8.1472 -1.1786 9.1813 45 1 3.6419 -0.1106 4.0753 46 1 2.8298 1.0436 2.0586 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:57:53 Heat of formation + Delta-G solvation = 40.195563 kcal Electronic energy + Delta-G solvation = -28188.275816 eV Core-core repulsion = 24048.076342 eV Total energy + Delta-G solvation = -4140.199475 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.39655 -41.53569 -40.67884 -39.73541 -38.92520 -37.11268 -35.75383 -32.63207 -32.28761 -31.73319 -31.02087 -30.28575 -28.09331 -26.87680 -26.18190 -24.62849 -23.85435 -22.38421 -22.32061 -21.79043 -21.51704 -20.28157 -19.47411 -18.56325 -18.11968 -17.83234 -17.47783 -17.16463 -16.84236 -16.45821 -16.37681 -15.97988 -15.86593 -15.56421 -15.48502 -15.43804 -14.94841 -14.66754 -14.59489 -14.40345 -14.31568 -13.83743 -13.75243 -13.63052 -13.56193 -13.37056 -13.25694 -12.94306 -12.24293 -12.11042 -12.07312 -12.02925 -11.79338 -11.72564 -11.60068 -11.50092 -10.98599 -10.39026 -10.36184 -10.20360 -10.03446 -9.49923 -9.22370 -4.98003 0.28397 0.31558 0.96948 1.35291 1.45620 1.49711 1.54580 1.66614 1.94916 2.00774 2.59735 2.66461 3.18107 3.31553 3.51722 3.57678 3.61842 3.69096 3.76919 3.85281 3.93865 3.96728 4.05704 4.06501 4.11770 4.18326 4.31960 4.37548 4.43580 4.47355 4.50276 4.65933 4.67905 4.70506 4.72714 4.77217 4.88460 4.91501 4.98079 4.98681 5.14074 5.16496 5.20159 5.26121 5.35218 5.50925 5.70380 5.75169 6.19959 6.27359 6.47683 6.78201 6.80772 7.13554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.783 3.217 4 C -0.162 4.162 5 C -0.062 4.062 6 C -0.168 4.168 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.035 3.965 10 C 0.511 3.489 11 O -0.576 6.576 12 N -0.706 5.706 13 C 0.134 3.866 14 C -0.109 4.109 15 H 0.113 0.887 16 C -0.137 4.137 17 C 0.119 3.881 18 H 0.104 0.896 19 N -0.360 5.360 20 C 0.057 3.943 21 C -0.290 4.290 22 C 0.031 3.969 23 N -0.345 5.345 24 C -0.122 4.122 25 C -0.198 4.198 26 C -0.074 4.074 27 H 0.395 0.605 28 H 0.101 0.899 29 H -0.281 1.281 30 H -0.305 1.305 31 H 0.130 0.870 32 H 0.125 0.875 33 H 0.129 0.871 34 H 0.128 0.872 35 H 0.422 0.578 36 H 0.069 0.931 37 H 0.058 0.942 38 H 0.063 0.937 39 H 0.113 0.887 40 H 0.208 0.792 41 H 0.165 0.835 42 H 0.196 0.804 43 H 0.119 0.881 44 H 0.098 0.902 45 H 0.168 0.832 46 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.540 8.139 1.013 8.346 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.689 3.311 4 C -0.163 4.163 5 C -0.080 4.080 6 C -0.187 4.187 7 C 0.076 3.924 8 O -0.235 6.235 9 C -0.042 4.042 10 C 0.297 3.703 11 O -0.455 6.455 12 N -0.361 5.361 13 C 0.010 3.990 14 C -0.127 4.127 15 H 0.131 0.869 16 C -0.176 4.176 17 C 0.016 3.984 18 H 0.122 0.878 19 N -0.143 5.143 20 C -0.089 4.089 21 C -0.319 4.319 22 C -0.154 4.154 23 N -0.167 5.167 24 C -0.160 4.160 25 C -0.217 4.217 26 C -0.091 4.091 27 H 0.245 0.755 28 H 0.119 0.881 29 H -0.208 1.208 30 H -0.233 1.233 31 H 0.148 0.852 32 H 0.143 0.857 33 H 0.147 0.853 34 H 0.145 0.855 35 H 0.260 0.740 36 H 0.087 0.913 37 H 0.076 0.924 38 H 0.082 0.918 39 H 0.132 0.868 40 H 0.225 0.775 41 H 0.183 0.817 42 H 0.213 0.787 43 H 0.137 0.863 44 H 0.116 0.884 45 H 0.186 0.814 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.243 6.087 0.512 6.507 hybrid contribution -0.070 0.182 -0.253 0.319 sum 2.173 6.269 0.259 6.640 Atomic orbital electron populations 1.86473 1.17547 1.82245 1.50481 1.25209 0.85121 1.11142 0.96965 0.93797 0.77733 0.74732 0.84795 1.20358 1.02808 0.94853 0.98281 1.20903 0.96840 0.94193 0.96111 1.20613 1.02502 1.01000 0.94550 1.19206 0.94701 0.91997 0.86495 1.86132 1.69286 1.38503 1.29538 1.22779 0.99546 0.93640 0.88254 1.20571 0.77847 0.87914 0.83968 1.90779 1.56036 1.19025 1.79668 1.45621 1.55845 1.14589 1.20002 1.21318 0.98734 0.93245 0.85689 1.22813 0.95371 1.00229 0.94308 0.86926 1.23382 0.95082 1.01361 0.97748 1.22299 1.00119 0.82147 0.93809 0.87768 1.48577 1.49296 1.07340 1.09055 1.23077 0.99665 0.84722 1.01450 1.21901 1.14099 1.02082 0.93787 1.24369 0.98898 0.90952 1.01223 1.77350 1.23938 1.19678 0.95714 1.23534 0.94872 1.05796 0.91847 1.21523 1.06171 0.92626 1.01346 1.21072 0.95446 1.00168 0.92409 0.75519 0.88149 1.20792 1.23350 0.85166 0.85745 0.85328 0.85490 0.73958 0.91277 0.92386 0.91847 0.86841 0.77490 0.81709 0.78677 0.86288 0.88377 0.81431 0.82652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.10 12.83 -148.98 -1.91 -2.01 16 2 C -0.07 0.08 2.80 71.24 0.20 0.28 16 3 Si 0.78 -3.20 29.80 68.60 2.04 -1.16 16 4 C -0.16 0.11 5.35 -19.85 -0.11 0.01 16 5 C -0.06 -0.15 9.68 22.25 0.22 0.07 16 6 C -0.17 -0.69 9.99 22.37 0.22 -0.46 16 7 C 0.12 0.22 6.69 22.51 0.15 0.37 16 8 O -0.32 -1.31 9.67 -73.41 -0.71 -2.02 16 9 C 0.04 -0.22 5.22 71.24 0.37 0.15 16 10 C 0.51 -0.19 7.91 87.66 0.69 0.50 16 11 O -0.58 -7.09 16.50 16.00 0.26 -6.83 16 12 N -0.71 6.09 5.56 -463.07 -2.57 3.51 16 13 C 0.13 -0.88 5.51 86.38 0.48 -0.40 16 14 C -0.11 1.14 3.34 -10.27 -0.03 1.10 16 15 H 0.11 -1.39 7.01 -2.39 -0.02 -1.41 16 16 C -0.14 0.82 7.43 31.12 0.23 1.05 16 17 C 0.12 -0.53 5.19 45.58 0.24 -0.29 16 18 H 0.10 -0.32 8.14 -2.39 -0.02 -0.34 16 19 N -0.36 -0.21 3.79 -324.70 -1.23 -1.44 16 20 C 0.06 -0.22 9.63 83.54 0.80 0.59 16 21 C -0.29 0.33 10.80 21.99 0.24 0.57 16 22 C 0.03 0.09 12.03 85.24 1.02 1.12 16 23 N -0.35 -2.50 12.58 -57.03 -0.72 -3.22 16 24 C -0.12 1.38 6.88 31.18 0.21 1.59 16 25 C -0.20 0.92 9.04 22.37 0.20 1.12 16 26 C -0.07 0.33 8.66 22.25 0.19 0.53 16 27 H 0.39 -3.22 8.70 -74.05 -0.64 -3.86 16 28 H 0.10 0.07 7.96 -2.38 -0.02 0.05 16 29 H -0.28 0.05 7.11 99.48 0.71 0.76 16 30 H -0.30 -1.32 7.11 99.48 0.71 -0.61 16 31 H 0.13 0.24 8.06 -2.91 -0.02 0.22 16 32 H 0.12 0.61 8.06 -2.91 -0.02 0.59 16 33 H 0.13 -1.67 7.65 -2.39 -0.02 -1.69 16 34 H 0.13 -1.63 7.68 -2.39 -0.02 -1.65 16 35 H 0.42 -7.11 8.47 -92.71 -0.79 -7.89 16 36 H 0.07 -0.31 7.84 -2.39 -0.02 -0.33 16 37 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.11 -0.85 8.10 -2.39 -0.02 -0.87 16 40 H 0.21 -2.67 6.68 -2.91 -0.02 -2.69 16 41 H 0.17 -0.92 8.06 -2.91 -0.02 -0.94 16 42 H 0.20 -0.35 8.06 -2.91 -0.02 -0.37 16 43 H 0.12 -1.47 7.90 -2.39 -0.02 -1.49 16 44 H 0.10 -1.35 6.96 -2.39 -0.02 -1.36 16 45 H 0.17 -2.12 6.30 -2.91 -0.02 -2.14 16 46 H 0.16 -1.60 4.90 -2.91 -0.01 -1.61 16 Total: 0.00 -33.31 383.88 0.13 -33.18 By element: Atomic # 1 Polarization: -27.55 SS G_CDS: -0.37 Total: -27.92 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: 5.33 Total: 7.89 kcal Atomic # 7 Polarization: 3.38 SS G_CDS: -4.52 Total: -1.14 kcal Atomic # 8 Polarization: -8.50 SS G_CDS: -2.36 Total: -10.86 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.04 Total: -1.16 kcal Total: -33.31 0.13 -33.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.377 kcal (2) G-P(sol) polarization free energy of solvation -33.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.063 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds