Wall clock time and date at job start Sun Mar 7 2021 14:58:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47078 * 2 1 4 4 C 1.50704 * 109.46850 * 240.00214 * 2 1 3 5 5 C 1.38246 * 119.97128 * 120.00141 * 4 2 1 6 6 C 1.38283 * 120.11014 * 180.02562 * 5 4 2 7 7 C 1.38121 * 120.05809 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94246 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05870 * 180.02562 * 8 7 6 10 10 C 1.42901 * 116.99604 * 0.02562 * 9 8 7 11 11 C 1.50704 * 109.46992 * 179.97438 * 10 9 8 12 12 O 1.21274 * 119.99890 * 359.97438 * 11 10 9 13 13 N 1.34776 * 119.99647 * 179.97438 * 11 10 9 14 14 C 1.46500 * 119.99752 * 179.97438 * 13 11 10 15 15 C 1.52998 * 109.47293 * 180.02562 * 14 13 11 16 16 H 1.08993 * 112.84953 * 316.19681 * 15 14 13 17 17 C 1.53788 * 113.61527 * 87.50392 * 15 14 13 18 18 C 1.53777 * 87.08157 * 139.98000 * 17 15 14 19 19 H 1.08995 * 113.61413 * 220.01534 * 18 17 15 20 20 N 1.46502 * 113.68823 * 89.12637 * 18 17 15 21 21 C 1.34949 * 126.04177 * 347.18033 * 20 18 17 22 22 C 1.35313 * 107.74692 * 179.83805 * 21 20 18 23 23 C 1.39861 * 107.92359 * 0.42506 * 22 21 20 24 24 N 1.30845 * 108.20314 * 359.73812 * 23 22 21 25 25 C 1.53776 * 87.08213 * 334.56975 * 18 17 15 26 26 C 1.38162 * 119.97090 * 300.25251 * 4 2 1 27 27 H 0.96704 * 114.00195 * 300.00100 * 1 2 3 28 28 H 1.08997 * 109.47091 * 120.00335 * 2 1 3 29 29 H 1.48508 * 109.99787 * 178.68310 * 3 2 1 30 30 H 1.48498 * 110.00314 * 299.99750 * 3 2 1 31 31 H 1.08001 * 119.94242 * 359.97438 * 5 4 2 32 32 H 1.08007 * 119.97266 * 179.97438 * 6 5 4 33 33 H 1.07994 * 120.03028 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47352 * 299.99771 * 10 9 8 35 35 H 1.08999 * 109.47144 * 59.99795 * 10 9 8 36 36 H 0.96995 * 120.00267 * 0.02562 * 13 11 10 37 37 H 1.09006 * 109.47300 * 299.99891 * 14 13 11 38 38 H 1.08999 * 109.47172 * 60.00041 * 14 13 11 39 39 H 1.09002 * 113.60873 * 254.52997 * 17 15 14 40 40 H 1.08997 * 113.61062 * 25.43379 * 17 15 14 41 41 H 1.08004 * 126.12519 * 359.97438 * 21 20 18 42 42 H 1.08001 * 126.03624 * 180.15905 * 22 21 20 43 43 H 1.08004 * 125.90299 * 179.71695 * 23 22 21 44 44 H 1.09006 * 113.61274 * 270.88413 * 25 18 17 45 45 H 1.09001 * 113.61498 * 139.98556 * 25 18 17 46 46 H 1.07998 * 120.02953 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7260 -0.0380 -2.1401 6 6 3.1881 -0.6868 -3.2705 7 6 2.8559 -2.0088 -3.4937 8 6 2.0584 -2.6859 -2.5823 9 8 1.7306 -3.9869 -2.7993 10 6 2.2425 -4.5954 -3.9866 11 6 1.7790 -6.0277 -4.0569 12 8 1.0797 -6.4826 -3.1766 13 7 2.1417 -6.8030 -5.0979 14 6 1.6917 -8.1955 -5.1660 15 6 2.2396 -8.8471 -6.4372 16 1 2.1513 -8.2051 -7.3136 17 6 3.6377 -9.4628 -6.2605 18 6 3.1474 -10.6308 -7.1324 19 1 3.4900 -11.6065 -6.7880 20 7 3.3636 -10.4257 -8.5668 21 6 3.7025 -9.2621 -9.1603 22 6 3.8092 -9.4927 -10.4893 23 6 3.5164 -10.8413 -10.7170 24 7 3.2491 -11.4016 -9.5653 25 6 1.7248 -10.2778 -6.6672 26 6 1.5928 -2.0316 -1.4513 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5139 0.8899 29 1 3.5347 1.7703 0.0321 30 1 1.5616 2.4679 -1.2085 31 1 2.9858 0.9961 -1.9680 32 1 3.8085 -0.1592 -3.9799 33 1 3.2167 -2.5150 -4.3768 34 1 1.8790 -4.0524 -4.8590 35 1 3.3319 -4.5669 -3.9689 36 1 2.7013 -6.4393 -5.8017 37 1 2.0563 -8.7383 -4.2938 38 1 0.6022 -8.2248 -5.1828 39 1 4.4337 -8.8779 -6.7214 40 1 3.8619 -9.7491 -5.2330 41 1 3.8622 -8.3166 -8.6632 42 1 4.0699 -8.7633 -11.2419 43 1 3.5114 -11.3349 -11.6777 44 1 1.4262 -10.7869 -5.7508 45 1 0.9766 -10.3511 -7.4564 46 1 0.9682 -2.5552 -0.7426 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:58:43 Heat of formation + Delta-G solvation = 45.699206 kcal Electronic energy + Delta-G solvation = -28240.815957 eV Core-core repulsion = 24100.855138 eV Total energy + Delta-G solvation = -4139.960819 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.50604 -41.57363 -40.73415 -39.86465 -38.84294 -37.29708 -35.80205 -32.68341 -32.59848 -31.78778 -31.06567 -30.12757 -28.16175 -27.15890 -26.75957 -24.68495 -23.72717 -22.53317 -22.44483 -21.83772 -21.47424 -20.44620 -19.20052 -18.53978 -18.40528 -18.01864 -17.63109 -17.57062 -17.09400 -16.87458 -16.52104 -16.11449 -15.87009 -15.62450 -15.57683 -15.36413 -14.92439 -14.66998 -14.58738 -14.52536 -14.24846 -14.03475 -13.83210 -13.78353 -13.57187 -13.48567 -13.22888 -13.09242 -12.40979 -12.35710 -12.20965 -12.14295 -11.95054 -11.83322 -11.81268 -11.58048 -10.96951 -10.43262 -10.38087 -10.31250 -9.90844 -9.56470 -9.31773 -4.98737 0.14972 0.34573 0.89526 1.21787 1.38656 1.40343 1.41158 1.62152 1.91512 1.95228 2.44973 2.59155 2.94121 3.05790 3.28840 3.34071 3.40366 3.44830 3.68295 3.74502 3.75048 3.81365 3.83441 3.86554 3.93194 3.95314 4.14399 4.16841 4.21454 4.26701 4.34420 4.43721 4.46561 4.53858 4.55651 4.58688 4.66898 4.73525 4.83276 4.90848 4.92287 5.06883 5.15022 5.17637 5.27953 5.39235 5.57701 5.69622 6.03923 6.14132 6.30176 6.60605 6.75180 6.99496 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.035 4.035 5 C -0.161 4.161 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.515 3.485 12 O -0.510 6.510 13 N -0.728 5.728 14 C 0.132 3.868 15 C -0.128 4.128 16 H 0.101 0.899 17 C -0.139 4.139 18 C 0.134 3.866 19 H 0.113 0.887 20 N -0.356 5.356 21 C 0.051 3.949 22 C -0.273 4.273 23 C 0.045 3.955 24 N -0.293 5.293 25 C -0.136 4.136 26 C -0.116 4.116 27 H 0.384 0.616 28 H 0.078 0.922 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.120 0.880 32 H 0.131 0.869 33 H 0.131 0.869 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.402 0.598 37 H 0.076 0.924 38 H 0.075 0.925 39 H 0.082 0.918 40 H 0.111 0.889 41 H 0.170 0.830 42 H 0.148 0.852 43 H 0.185 0.815 44 H 0.107 0.893 45 H 0.082 0.918 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.302 3.548 -0.241 4.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.179 4.179 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.199 6.199 10 C -0.039 4.039 11 C 0.300 3.700 12 O -0.384 6.384 13 N -0.382 5.382 14 C 0.009 3.991 15 C -0.147 4.147 16 H 0.119 0.881 17 C -0.177 4.177 18 C 0.031 3.969 19 H 0.131 0.869 20 N -0.138 5.138 21 C -0.095 4.095 22 C -0.302 4.302 23 C -0.141 4.141 24 N -0.113 5.113 25 C -0.175 4.175 26 C -0.135 4.135 27 H 0.231 0.769 28 H 0.096 0.904 29 H -0.180 1.180 30 H -0.175 1.175 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.149 0.851 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.236 0.764 37 H 0.094 0.906 38 H 0.093 0.907 39 H 0.100 0.900 40 H 0.129 0.871 41 H 0.187 0.813 42 H 0.166 0.834 43 H 0.201 0.799 44 H 0.126 0.874 45 H 0.101 0.899 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.885 2.245 0.302 3.668 hybrid contribution 0.775 0.483 -1.344 1.625 sum 3.660 2.728 -1.042 4.682 Atomic orbital electron populations 1.86503 1.16950 1.81878 1.49709 1.24743 0.85967 1.10536 0.97275 0.95286 0.80536 0.77782 0.87404 1.19151 0.96352 0.93108 0.94887 1.20799 1.01873 0.99383 0.95810 1.20847 0.97865 0.93763 0.96429 1.21265 1.03764 0.96494 1.00994 1.19014 0.94719 0.83010 0.94728 1.86174 1.70386 1.22477 1.40903 1.22464 1.00235 0.92215 0.88954 1.20022 0.80838 0.86991 0.82165 1.90799 1.35797 1.74171 1.37586 1.45780 1.54627 1.12726 1.25080 1.21394 1.00152 0.80340 0.97225 1.22965 0.96401 0.96986 0.98314 0.88113 1.23534 0.97179 0.95938 1.01037 1.22032 0.97967 1.01191 0.75732 0.86878 1.48394 1.53055 1.06436 1.05937 1.22456 1.01178 0.91820 0.94064 1.21565 1.15390 0.97628 0.95616 1.23978 0.98910 0.94090 0.97114 1.77434 1.23998 1.13762 0.96119 1.23384 0.96360 0.94768 1.02942 1.20245 1.02244 0.93842 0.97146 0.76868 0.90422 1.17959 1.17498 0.86214 0.85088 0.85077 0.88728 0.88730 0.76388 0.90563 0.90660 0.89970 0.87094 0.81275 0.83402 0.79854 0.87442 0.89925 0.84376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.44 12.74 -35.23 -0.45 -0.89 16 2 C -0.07 -0.03 2.81 36.01 0.10 0.07 16 3 Si 0.69 -0.67 29.79 -169.99 -5.06 -5.73 16 4 C -0.03 -0.10 5.42 -104.64 -0.57 -0.67 16 5 C -0.16 -0.38 8.67 -39.56 -0.34 -0.72 16 6 C -0.07 -0.07 10.04 -39.61 -0.40 -0.47 16 7 C -0.21 -0.16 9.04 -39.43 -0.36 -0.51 16 8 C 0.13 0.38 6.69 -39.22 -0.26 0.12 16 9 O -0.29 -0.99 9.67 -39.35 -0.38 -1.37 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 11 C 0.52 0.51 7.91 -10.98 -0.09 0.42 16 12 O -0.51 -3.18 16.50 -14.35 -0.24 -3.41 16 13 N -0.73 1.98 5.56 -60.29 -0.33 1.65 16 14 C 0.13 -0.32 5.51 -4.04 -0.02 -0.35 16 15 C -0.13 0.52 3.33 -89.81 -0.30 0.22 16 16 H 0.10 -0.43 6.96 -51.93 -0.36 -0.79 16 17 C -0.14 0.60 6.88 -25.92 -0.18 0.42 16 18 C 0.13 -0.24 5.18 -67.12 -0.35 -0.59 16 19 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 20 N -0.36 -0.25 3.79 -54.08 -0.21 -0.46 16 21 C 0.05 -0.04 9.62 -17.22 -0.17 -0.20 16 22 C -0.27 -0.05 10.80 -40.02 -0.43 -0.48 16 23 C 0.05 0.07 12.03 -17.37 -0.21 -0.14 16 24 N -0.29 -0.98 12.58 30.62 0.39 -0.60 16 25 C -0.14 0.37 7.44 -25.92 -0.19 0.18 16 26 C -0.12 -0.42 9.55 -39.43 -0.38 -0.80 16 27 H 0.38 -1.69 8.74 45.56 0.40 -1.29 16 28 H 0.08 -0.09 7.96 -51.93 -0.41 -0.51 16 29 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 30 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 31 H 0.12 0.20 4.87 -52.49 -0.26 -0.06 16 32 H 0.13 -0.19 8.06 -52.48 -0.42 -0.62 16 33 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 34 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 35 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 36 H 0.40 -2.40 8.47 -40.82 -0.35 -2.74 16 37 H 0.08 -0.14 7.84 -51.93 -0.41 -0.54 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 -0.39 7.00 -51.93 -0.36 -0.75 16 40 H 0.11 -0.54 7.89 -51.93 -0.41 -0.95 16 41 H 0.17 -0.70 6.66 -52.48 -0.35 -1.05 16 42 H 0.15 -0.25 8.06 -52.49 -0.42 -0.68 16 43 H 0.18 -0.21 8.06 -52.48 -0.42 -0.63 16 44 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 45 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.14 0.51 8.06 -52.49 -0.42 0.09 16 LS Contribution 383.76 15.07 5.78 5.78 Total: 0.00 -12.86 383.76 -10.66 -23.52 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -6.21 Total: -15.13 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -3.95 Total: -3.35 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.15 Total: 0.59 kcal Atomic # 8 Polarization: -4.61 SS G_CDS: -1.07 Total: -5.67 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.06 Total: -5.73 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -12.86 -10.66 -23.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.217 kcal (2) G-P(sol) polarization free energy of solvation -12.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.517 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds