Wall clock time and date at job start Sun Mar 7 2021 14:58:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47078 * 2 1 4 4 C 1.50704 * 109.46850 * 240.00214 * 2 1 3 5 5 C 1.38246 * 119.97128 * 120.00141 * 4 2 1 6 6 C 1.38283 * 120.11014 * 180.02562 * 5 4 2 7 7 C 1.38121 * 120.05809 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94246 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05870 * 180.02562 * 8 7 6 10 10 C 1.42901 * 116.99604 * 0.02562 * 9 8 7 11 11 C 1.50704 * 109.46992 * 179.97438 * 10 9 8 12 12 O 1.21274 * 119.99890 * 359.97438 * 11 10 9 13 13 N 1.34776 * 119.99647 * 179.97438 * 11 10 9 14 14 C 1.46500 * 119.99752 * 179.97438 * 13 11 10 15 15 C 1.52998 * 109.47293 * 180.02562 * 14 13 11 16 16 H 1.08993 * 112.84953 * 316.19681 * 15 14 13 17 17 C 1.53788 * 113.61527 * 87.50392 * 15 14 13 18 18 C 1.53777 * 87.08157 * 139.98000 * 17 15 14 19 19 H 1.08995 * 113.61413 * 220.01534 * 18 17 15 20 20 N 1.46502 * 113.68823 * 89.12637 * 18 17 15 21 21 C 1.34949 * 126.04177 * 347.18033 * 20 18 17 22 22 C 1.35313 * 107.74692 * 179.83805 * 21 20 18 23 23 C 1.39861 * 107.92359 * 0.42506 * 22 21 20 24 24 N 1.30845 * 108.20314 * 359.73812 * 23 22 21 25 25 C 1.53776 * 87.08213 * 334.56975 * 18 17 15 26 26 C 1.38162 * 119.97090 * 300.25251 * 4 2 1 27 27 H 0.96704 * 114.00195 * 300.00100 * 1 2 3 28 28 H 1.08997 * 109.47091 * 120.00335 * 2 1 3 29 29 H 1.48508 * 109.99787 * 178.68310 * 3 2 1 30 30 H 1.48498 * 110.00314 * 299.99750 * 3 2 1 31 31 H 1.08001 * 119.94242 * 359.97438 * 5 4 2 32 32 H 1.08007 * 119.97266 * 179.97438 * 6 5 4 33 33 H 1.07994 * 120.03028 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47352 * 299.99771 * 10 9 8 35 35 H 1.08999 * 109.47144 * 59.99795 * 10 9 8 36 36 H 0.96995 * 120.00267 * 0.02562 * 13 11 10 37 37 H 1.09006 * 109.47300 * 299.99891 * 14 13 11 38 38 H 1.08999 * 109.47172 * 60.00041 * 14 13 11 39 39 H 1.09002 * 113.60873 * 254.52997 * 17 15 14 40 40 H 1.08997 * 113.61062 * 25.43379 * 17 15 14 41 41 H 1.08004 * 126.12519 * 359.97438 * 21 20 18 42 42 H 1.08001 * 126.03624 * 180.15905 * 22 21 20 43 43 H 1.08004 * 125.90299 * 179.71695 * 23 22 21 44 44 H 1.09006 * 113.61274 * 270.88413 * 25 18 17 45 45 H 1.09001 * 113.61498 * 139.98556 * 25 18 17 46 46 H 1.07998 * 120.02953 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7260 -0.0380 -2.1401 6 6 3.1881 -0.6868 -3.2705 7 6 2.8559 -2.0088 -3.4937 8 6 2.0584 -2.6859 -2.5823 9 8 1.7306 -3.9869 -2.7993 10 6 2.2425 -4.5954 -3.9866 11 6 1.7790 -6.0277 -4.0569 12 8 1.0797 -6.4826 -3.1766 13 7 2.1417 -6.8030 -5.0979 14 6 1.6917 -8.1955 -5.1660 15 6 2.2396 -8.8471 -6.4372 16 1 2.1513 -8.2051 -7.3136 17 6 3.6377 -9.4628 -6.2605 18 6 3.1474 -10.6308 -7.1324 19 1 3.4900 -11.6065 -6.7880 20 7 3.3636 -10.4257 -8.5668 21 6 3.7025 -9.2621 -9.1603 22 6 3.8092 -9.4927 -10.4893 23 6 3.5164 -10.8413 -10.7170 24 7 3.2491 -11.4016 -9.5653 25 6 1.7248 -10.2778 -6.6672 26 6 1.5928 -2.0316 -1.4513 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5139 0.8899 29 1 3.5347 1.7703 0.0321 30 1 1.5616 2.4679 -1.2085 31 1 2.9858 0.9961 -1.9680 32 1 3.8085 -0.1592 -3.9799 33 1 3.2167 -2.5150 -4.3768 34 1 1.8790 -4.0524 -4.8590 35 1 3.3319 -4.5669 -3.9689 36 1 2.7013 -6.4393 -5.8017 37 1 2.0563 -8.7383 -4.2938 38 1 0.6022 -8.2248 -5.1828 39 1 4.4337 -8.8779 -6.7214 40 1 3.8619 -9.7491 -5.2330 41 1 3.8622 -8.3166 -8.6632 42 1 4.0699 -8.7633 -11.2419 43 1 3.5114 -11.3349 -11.6777 44 1 1.4262 -10.7869 -5.7508 45 1 0.9766 -10.3511 -7.4564 46 1 0.9682 -2.5552 -0.7426 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:58:42 Heat of formation + Delta-G solvation = 42.273125 kcal Electronic energy + Delta-G solvation = -28240.964523 eV Core-core repulsion = 24100.855138 eV Total energy + Delta-G solvation = -4140.109385 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.42605 -41.62931 -40.74343 -39.77274 -38.90102 -37.31735 -35.80184 -32.70439 -32.58432 -31.82215 -31.03515 -30.11055 -28.05548 -26.90929 -26.77464 -24.57098 -23.81151 -22.56782 -22.35056 -21.79066 -21.45145 -20.31209 -19.21593 -18.51558 -18.39285 -17.86318 -17.68678 -17.54820 -17.13148 -16.84475 -16.39717 -16.07250 -15.87532 -15.58910 -15.51531 -15.35332 -14.90554 -14.67372 -14.62940 -14.44197 -14.32613 -13.87878 -13.84159 -13.71666 -13.54681 -13.28673 -13.22535 -12.98067 -12.47021 -12.26695 -12.17915 -12.13795 -11.86404 -11.78644 -11.62691 -11.53450 -11.04222 -10.43817 -10.38482 -10.25061 -9.96902 -9.52528 -9.42214 -4.92827 0.07323 0.22961 0.94264 1.25618 1.39551 1.44264 1.52095 1.65320 1.92417 1.96356 2.49860 2.52677 3.15745 3.28420 3.37730 3.47657 3.57143 3.65473 3.74428 3.79009 3.86000 3.91331 3.97310 4.02032 4.04232 4.14574 4.16091 4.20458 4.35105 4.40015 4.44464 4.55457 4.63527 4.67774 4.69863 4.74295 4.85305 4.85795 4.88484 4.96030 5.08256 5.11134 5.17083 5.19277 5.29649 5.31011 5.53096 5.72815 6.17094 6.17600 6.40893 6.75725 6.87173 7.07673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.091 4.091 3 Si 0.787 3.213 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.071 4.071 7 C -0.201 4.201 8 C 0.121 3.879 9 O -0.319 6.319 10 C 0.035 3.965 11 C 0.512 3.488 12 O -0.574 6.574 13 N -0.706 5.706 14 C 0.133 3.867 15 C -0.110 4.110 16 H 0.111 0.889 17 C -0.122 4.122 18 C 0.119 3.881 19 H 0.106 0.894 20 N -0.360 5.360 21 C 0.056 3.944 22 C -0.290 4.290 23 C 0.031 3.969 24 N -0.344 5.344 25 C -0.137 4.137 26 C -0.145 4.145 27 H 0.404 0.596 28 H 0.091 0.909 29 H -0.283 1.283 30 H -0.294 1.294 31 H 0.122 0.878 32 H 0.159 0.841 33 H 0.169 0.831 34 H 0.125 0.875 35 H 0.129 0.871 36 H 0.422 0.578 37 H 0.070 0.930 38 H 0.058 0.942 39 H 0.097 0.903 40 H 0.120 0.880 41 H 0.207 0.793 42 H 0.165 0.835 43 H 0.197 0.803 44 H 0.114 0.886 45 H 0.063 0.937 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.892 5.010 -1.085 7.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.199 4.199 3 Si 0.692 3.308 4 C -0.053 4.053 5 C -0.199 4.199 6 C -0.089 4.089 7 C -0.219 4.219 8 C 0.075 3.925 9 O -0.232 6.232 10 C -0.043 4.043 11 C 0.298 3.702 12 O -0.453 6.453 13 N -0.360 5.360 14 C 0.010 3.990 15 C -0.128 4.128 16 H 0.129 0.871 17 C -0.160 4.160 18 C 0.017 3.983 19 H 0.124 0.876 20 N -0.143 5.143 21 C -0.090 4.090 22 C -0.319 4.319 23 C -0.154 4.154 24 N -0.166 5.166 25 C -0.175 4.175 26 C -0.164 4.164 27 H 0.255 0.745 28 H 0.109 0.891 29 H -0.210 1.210 30 H -0.222 1.222 31 H 0.139 0.861 32 H 0.177 0.823 33 H 0.186 0.814 34 H 0.142 0.858 35 H 0.147 0.853 36 H 0.260 0.740 37 H 0.089 0.911 38 H 0.076 0.924 39 H 0.115 0.885 40 H 0.138 0.862 41 H 0.224 0.776 42 H 0.182 0.818 43 H 0.214 0.786 44 H 0.133 0.867 45 H 0.082 0.918 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.487 3.689 -0.562 5.836 hybrid contribution 0.269 -0.026 -1.146 1.178 sum 4.755 3.663 -1.708 6.241 Atomic orbital electron populations 1.86451 1.17269 1.82545 1.51326 1.25047 0.85958 1.11932 0.96989 0.94222 0.77254 0.74534 0.84778 1.19504 0.96621 0.93122 0.96015 1.21021 1.02508 0.99712 0.96674 1.21252 0.97404 0.94045 0.96208 1.21617 1.02534 0.96339 1.01430 1.19174 0.95184 0.83079 0.95022 1.86132 1.71237 1.22833 1.43000 1.22790 1.02150 0.90775 0.88581 1.20486 0.79909 0.87942 0.81853 1.90776 1.38907 1.75483 1.40121 1.45619 1.53663 1.12244 1.24492 1.21341 0.99266 0.80543 0.97850 1.22825 0.96318 0.96025 0.97677 0.87050 1.23503 0.97103 0.94460 1.00980 1.22260 0.98808 1.02114 0.75120 0.87641 1.48585 1.52829 1.06502 1.06340 1.23066 0.99429 0.92505 0.94006 1.21896 1.15908 0.97392 0.96683 1.24374 0.98581 0.95106 0.97338 1.77352 1.26070 1.15790 0.97339 1.23388 0.95514 0.96046 1.02593 1.20325 1.03430 0.94564 0.98032 0.74503 0.89120 1.21019 1.22212 0.86089 0.82298 0.81403 0.85763 0.85350 0.74003 0.91122 0.92377 0.88460 0.86168 0.77622 0.81754 0.78612 0.86734 0.91835 0.85926 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.43 12.74 -148.98 -1.90 -3.33 16 2 C -0.09 -0.15 2.81 71.24 0.20 0.05 16 3 Si 0.79 -1.33 29.79 68.60 2.04 0.71 16 4 C -0.05 -0.36 5.42 -19.88 -0.11 -0.47 16 5 C -0.18 -0.89 8.67 22.28 0.19 -0.70 16 6 C -0.07 -0.05 10.04 22.25 0.22 0.18 16 7 C -0.20 0.04 9.04 22.36 0.20 0.24 16 8 C 0.12 0.74 6.69 22.51 0.15 0.89 16 9 O -0.32 -2.34 9.67 -73.44 -0.71 -3.05 16 10 C 0.03 -0.12 5.22 71.24 0.37 0.25 16 11 C 0.51 0.79 7.91 87.66 0.69 1.49 16 12 O -0.57 -8.03 16.50 16.03 0.26 -7.76 16 13 N -0.71 4.95 5.56 -463.06 -2.57 2.38 16 14 C 0.13 -0.72 5.51 86.38 0.48 -0.25 16 15 C -0.11 1.04 3.33 -10.27 -0.03 1.00 16 16 H 0.11 -1.24 6.96 -2.39 -0.02 -1.25 16 17 C -0.12 1.28 6.88 31.12 0.21 1.49 16 18 C 0.12 -0.46 5.18 45.51 0.24 -0.22 16 19 H 0.11 -0.27 8.14 -2.39 -0.02 -0.29 16 20 N -0.36 -0.46 3.79 -325.01 -1.23 -1.69 16 21 C 0.06 -0.16 9.62 83.54 0.80 0.64 16 22 C -0.29 0.10 10.80 21.99 0.24 0.33 16 23 C 0.03 0.11 12.03 85.23 1.02 1.14 16 24 N -0.34 -2.68 12.58 -57.02 -0.72 -3.40 16 25 C -0.14 0.72 7.44 31.12 0.23 0.95 16 26 C -0.14 -1.31 9.55 22.37 0.21 -1.10 16 27 H 0.40 -3.43 8.74 -74.05 -0.65 -4.08 16 28 H 0.09 -0.15 7.96 -2.39 -0.02 -0.17 16 29 H -0.28 -0.79 7.11 99.48 0.71 -0.08 16 30 H -0.29 -1.60 7.11 99.48 0.71 -0.90 16 31 H 0.12 0.44 4.87 -2.91 -0.01 0.43 16 32 H 0.16 -0.89 8.06 -2.91 -0.02 -0.91 16 33 H 0.17 -1.45 6.30 -2.91 -0.02 -1.47 16 34 H 0.12 -1.19 7.66 -2.39 -0.02 -1.21 16 35 H 0.13 -1.34 7.66 -2.39 -0.02 -1.36 16 36 H 0.42 -6.38 8.47 -92.71 -0.79 -7.16 16 37 H 0.07 -0.26 7.84 -2.38 -0.02 -0.27 16 38 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.10 -1.24 7.00 -2.39 -0.02 -1.26 16 40 H 0.12 -1.40 7.89 -2.39 -0.02 -1.42 16 41 H 0.21 -2.42 6.66 -2.91 -0.02 -2.44 16 42 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 43 H 0.20 -0.25 8.06 -2.91 -0.02 -0.27 16 44 H 0.11 -0.80 8.10 -2.38 -0.02 -0.81 16 45 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 46 H 0.12 1.31 8.06 -2.91 -0.02 1.28 16 Total: 0.00 -34.97 383.76 0.14 -34.83 By element: Atomic # 1 Polarization: -24.24 SS G_CDS: -0.37 Total: -24.61 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: 5.33 Total: 5.92 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -4.52 Total: -2.71 kcal Atomic # 8 Polarization: -11.80 SS G_CDS: -2.34 Total: -14.14 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.04 Total: 0.71 kcal Total: -34.97 0.14 -34.83 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.104 kcal (2) G-P(sol) polarization free energy of solvation -34.969 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.831 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds