Wall clock time and date at job start Sun Mar 7 2021 14:58:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35987 * 117.00137 * 2 1 4 4 C 1.38676 * 120.00510 * 179.97438 * 3 2 1 5 5 C 1.38148 * 119.99992 * 179.74563 * 4 3 2 6 6 C 1.50702 * 120.00218 * 180.27387 * 5 4 3 7 7 O 1.42903 * 109.47121 * 105.27392 * 6 5 4 8 8 Si 1.86296 * 109.46899 * 345.27956 * 6 5 4 9 9 C 1.38681 * 120.00194 * 0.55110 * 5 4 3 10 10 O 1.35980 * 120.00135 * 179.72554 * 9 5 4 11 11 C 1.42904 * 116.99829 * 179.72597 * 10 9 5 12 12 C 1.50699 * 109.46898 * 179.97438 * 11 10 9 13 13 O 1.21280 * 120.00005 * 0.02562 * 12 11 10 14 14 N 1.34774 * 119.99733 * 179.97438 * 12 11 10 15 15 C 1.46507 * 119.99822 * 180.02562 * 14 12 11 16 16 C 1.53010 * 109.46885 * 180.02562 * 15 14 12 17 17 H 1.09000 * 112.84612 * 316.19304 * 16 15 14 18 18 C 1.53775 * 113.69051 * 87.46298 * 16 15 14 19 19 C 1.53775 * 87.08097 * 139.98978 * 18 16 15 20 20 H 1.08996 * 113.69638 * 220.00692 * 19 18 16 21 21 N 1.46506 * 113.61531 * 89.11408 * 19 18 16 22 22 C 1.34947 * 126.03209 * 347.50791 * 21 19 18 23 23 C 1.35316 * 107.74305 * 179.97438 * 22 21 19 24 24 C 1.39877 * 107.92269 * 359.97438 * 23 22 21 25 25 N 1.30840 * 108.19877 * 359.74150 * 24 23 22 26 26 C 1.53777 * 113.61090 * 184.99939 * 16 15 14 27 27 C 1.38722 * 119.99709 * 359.44634 * 9 5 4 28 28 C 1.38115 * 120.00036 * 0.27969 * 27 9 5 29 29 H 1.09000 * 109.46772 * 60.00583 * 1 2 3 30 30 H 1.09001 * 109.46756 * 179.97438 * 1 2 3 31 31 H 1.08991 * 109.47685 * 300.00059 * 1 2 3 32 32 H 1.07999 * 119.99371 * 359.97438 * 4 3 2 33 33 H 1.08993 * 109.47303 * 225.27924 * 6 5 4 34 34 H 0.96698 * 114.00240 * 300.00318 * 7 6 5 35 35 H 1.48497 * 110.00561 * 58.67775 * 8 6 5 36 36 H 1.48500 * 110.00221 * 180.02562 * 8 6 5 37 37 H 1.09003 * 109.46920 * 59.99506 * 11 10 9 38 38 H 1.08997 * 109.46988 * 299.99976 * 11 10 9 39 39 H 0.97004 * 120.00158 * 0.02562 * 14 12 11 40 40 H 1.08990 * 109.47265 * 60.00068 * 15 14 12 41 41 H 1.09000 * 109.46747 * 299.99640 * 15 14 12 42 42 H 1.09003 * 113.61490 * 25.44425 * 18 16 15 43 43 H 1.09002 * 113.61432 * 254.54235 * 18 16 15 44 44 H 1.07989 * 126.13309 * 359.97438 * 22 21 19 45 45 H 1.07993 * 126.04349 * 180.02562 * 23 22 21 46 46 H 1.07997 * 125.89900 * 180.02562 * 24 23 22 47 47 H 1.09003 * 113.61538 * 105.38727 * 26 16 15 48 48 H 1.09005 * 113.61509 * 334.48338 * 26 16 15 49 49 H 1.07992 * 120.00188 * 180.25123 * 27 9 5 50 50 H 1.08001 * 120.00145 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0583 2.5152 -0.0048 6 6 5.5632 2.5942 -0.0104 7 8 6.0156 2.9705 -1.3127 8 14 6.2740 0.9315 0.4374 9 6 3.3030 3.6783 0.0009 10 8 3.9203 4.8899 0.0013 11 6 3.0803 6.0460 0.0012 12 6 3.9344 7.2875 0.0024 13 8 5.1434 7.1918 0.0027 14 7 3.3547 8.5042 0.0020 15 6 4.1851 9.7112 0.0025 16 6 3.2857 10.9491 0.0025 17 1 2.4507 10.8654 -0.6931 18 6 2.8716 11.4119 1.4093 19 6 3.0745 12.8520 0.9096 20 1 3.5446 13.5078 1.6424 21 7 1.8746 13.4390 0.3079 22 6 0.7550 12.7722 -0.0427 23 6 -0.1149 13.6703 -0.5602 24 6 0.4938 14.9292 -0.5240 25 7 1.6841 14.7926 0.0016 26 6 4.0592 12.2725 -0.1197 27 6 1.9177 3.6056 0.0003 28 6 1.2907 2.3750 -0.0001 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 4.0194 0.3785 0.0014 33 1 5.8908 3.3372 0.7167 34 1 5.7596 2.3531 -2.0116 35 1 5.8090 -0.0965 -0.5281 36 1 7.7576 0.9961 0.4360 37 1 2.4506 6.0377 0.8910 38 1 2.4513 6.0380 -0.8890 39 1 2.3877 8.5808 0.0013 40 1 4.8149 9.7194 -0.8870 41 1 4.8137 9.7193 0.8929 42 1 3.5732 11.1177 2.1899 43 1 1.8367 11.1780 1.6589 44 1 0.5838 11.7119 0.0696 45 1 -1.1045 13.4537 -0.9342 46 1 0.0550 15.8548 -0.8663 47 1 3.9829 12.7335 -1.1045 48 1 5.0855 12.2135 0.2428 49 1 1.3294 4.5113 0.0006 50 1 0.2122 2.3184 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:58:46 Heat of formation + Delta-G solvation = 9.545272 kcal Electronic energy + Delta-G solvation = -33017.039804 eV Core-core repulsion = 28401.291422 eV Total energy + Delta-G solvation = -4615.748382 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.41301 -41.76420 -40.90961 -40.00403 -39.52376 -38.27547 -36.96940 -35.74837 -32.84325 -32.52158 -31.19656 -30.98149 -30.01494 -28.20863 -27.75277 -26.88678 -26.63405 -24.64610 -23.51950 -22.42608 -22.33093 -21.79728 -21.53238 -20.29436 -19.64443 -18.78890 -18.56291 -17.90481 -17.74555 -17.49798 -17.26247 -17.05227 -16.65135 -16.38007 -16.17544 -16.03291 -15.92970 -15.54769 -15.52348 -15.31956 -15.18185 -14.72839 -14.62151 -14.41552 -14.30133 -13.99160 -13.84048 -13.63599 -13.47492 -13.42013 -13.26912 -13.00714 -12.95862 -12.47464 -12.43269 -12.12080 -11.88708 -11.77957 -11.74396 -11.60936 -11.51431 -11.40613 -10.97060 -10.56517 -10.37327 -10.20347 -10.11491 -9.51268 -8.77895 -4.96207 0.07712 0.38083 0.95643 1.26728 1.46875 1.51825 1.53353 1.55452 1.90888 1.93603 2.36224 2.56509 2.62798 3.17756 3.30585 3.42147 3.51091 3.59583 3.66837 3.70930 3.78067 3.92566 3.98771 4.04620 4.10644 4.11744 4.15470 4.17552 4.26624 4.36736 4.44297 4.44814 4.46226 4.49369 4.64988 4.69401 4.70265 4.71983 4.76101 4.79735 4.87179 4.90398 4.97526 5.00159 5.12792 5.16753 5.19125 5.24004 5.34779 5.45309 5.73993 6.18540 6.20989 6.42643 6.49498 6.52374 6.77001 7.14669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.336 6.336 3 C 0.087 3.913 4 C -0.126 4.126 5 C -0.118 4.118 6 C -0.075 4.075 7 O -0.544 6.544 8 Si 0.773 3.227 9 C 0.102 3.898 10 O -0.310 6.310 11 C 0.035 3.965 12 C 0.511 3.489 13 O -0.573 6.573 14 N -0.707 5.707 15 C 0.134 3.866 16 C -0.109 4.109 17 H 0.111 0.889 18 C -0.122 4.122 19 C 0.120 3.880 20 H 0.105 0.895 21 N -0.360 5.360 22 C 0.056 3.944 23 C -0.290 4.290 24 C 0.031 3.969 25 N -0.345 5.345 26 C -0.137 4.137 27 C -0.163 4.163 28 C -0.157 4.157 29 H 0.065 0.935 30 H 0.112 0.888 31 H 0.069 0.931 32 H 0.144 0.856 33 H 0.107 0.893 34 H 0.382 0.618 35 H -0.274 1.274 36 H -0.301 1.301 37 H 0.128 0.872 38 H 0.120 0.880 39 H 0.421 0.579 40 H 0.055 0.945 41 H 0.070 0.930 42 H 0.120 0.880 43 H 0.098 0.902 44 H 0.208 0.792 45 H 0.165 0.835 46 H 0.197 0.803 47 H 0.062 0.938 48 H 0.114 0.886 49 H 0.167 0.833 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.850 -2.102 2.657 11.366 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.251 6.251 3 C 0.042 3.958 4 C -0.144 4.144 5 C -0.120 4.120 6 C -0.184 4.184 7 O -0.352 6.352 8 Si 0.677 3.323 9 C 0.057 3.943 10 O -0.224 6.224 11 C -0.043 4.043 12 C 0.297 3.703 13 O -0.451 6.451 14 N -0.362 5.362 15 C 0.011 3.989 16 C -0.128 4.128 17 H 0.129 0.871 18 C -0.160 4.160 19 C 0.017 3.983 20 H 0.123 0.877 21 N -0.143 5.143 22 C -0.090 4.090 23 C -0.319 4.319 24 C -0.154 4.154 25 N -0.166 5.166 26 C -0.176 4.176 27 C -0.181 4.181 28 C -0.176 4.176 29 H 0.084 0.916 30 H 0.131 0.869 31 H 0.088 0.912 32 H 0.162 0.838 33 H 0.125 0.875 34 H 0.231 0.769 35 H -0.200 1.200 36 H -0.229 1.229 37 H 0.146 0.854 38 H 0.138 0.862 39 H 0.259 0.741 40 H 0.074 0.926 41 H 0.088 0.912 42 H 0.138 0.862 43 H 0.116 0.884 44 H 0.224 0.776 45 H 0.183 0.817 46 H 0.214 0.786 47 H 0.081 0.919 48 H 0.132 0.868 49 H 0.184 0.816 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -7.775 -1.913 3.150 8.604 hybrid contribution -1.349 0.389 -1.686 2.194 sum -9.124 -1.525 1.464 9.365 Atomic orbital electron populations 1.23340 0.76405 1.05513 1.02411 1.86080 1.23396 1.26552 1.89054 1.18961 0.91979 0.85236 0.99628 1.20267 0.92586 0.97056 1.04512 1.19356 0.96032 0.90603 1.05964 1.25097 0.92145 1.13401 0.87719 1.86657 1.78753 1.52672 1.17089 0.94022 0.76515 0.72545 0.89185 1.18827 0.91506 0.84515 0.99491 1.86210 1.35218 1.11902 1.89030 1.22731 0.92665 0.82193 1.06681 1.20558 0.88286 0.85596 0.75898 1.90791 1.16941 1.87417 1.49951 1.45622 1.11530 1.04065 1.74965 1.21311 0.93216 0.82290 1.02112 1.22818 0.99062 0.92375 0.98528 0.87067 1.23497 1.05012 0.90271 0.97190 1.22262 0.83799 0.95945 0.96270 0.87675 1.48586 1.13146 1.04726 1.47812 1.23069 0.86590 1.00755 0.98538 1.21899 1.03819 0.92257 1.13898 1.24375 0.91937 1.00715 0.98398 1.77349 1.20581 0.96017 1.22673 1.23389 0.99668 0.95065 0.99485 1.21388 0.92081 0.99993 1.04638 1.21408 1.01528 0.90892 1.03759 0.91647 0.86926 0.91219 0.83818 0.87514 0.76949 1.19994 1.22934 0.85441 0.86209 0.74071 0.92636 0.91212 0.86181 0.88370 0.77565 0.81727 0.78638 0.91894 0.86813 0.81576 0.82211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.34 -0.53 10.50 -93.41 -0.98 -1.51 16 3 C 0.09 0.14 6.69 22.49 0.15 0.29 16 4 C -0.13 -0.37 8.59 22.35 0.19 -0.18 16 5 C -0.12 -0.53 5.27 -19.78 -0.10 -0.63 16 6 C -0.08 -0.47 2.37 71.24 0.17 -0.30 16 7 O -0.54 -5.39 12.88 -148.98 -1.92 -7.31 16 8 Si 0.77 2.01 30.23 68.60 2.07 4.08 16 9 C 0.10 0.32 6.66 22.49 0.15 0.47 16 10 O -0.31 -1.81 9.00 -74.29 -0.67 -2.48 16 11 C 0.04 -0.15 5.22 71.24 0.37 0.22 16 12 C 0.51 0.75 7.91 87.66 0.69 1.45 16 13 O -0.57 -8.21 16.50 16.01 0.26 -7.95 16 14 N -0.71 4.98 5.56 -463.04 -2.57 2.41 16 15 C 0.13 -0.69 5.52 86.38 0.48 -0.22 16 16 C -0.11 1.03 3.33 -10.27 -0.03 0.99 16 17 H 0.11 -1.24 6.97 -2.39 -0.02 -1.25 16 18 C -0.12 1.28 6.88 31.12 0.21 1.50 16 19 C 0.12 -0.46 5.18 45.51 0.24 -0.22 16 20 H 0.11 -0.27 8.14 -2.39 -0.02 -0.29 16 21 N -0.36 -0.42 3.79 -325.00 -1.23 -1.65 16 22 C 0.06 -0.18 9.62 83.54 0.80 0.62 16 23 C -0.29 0.17 10.80 21.99 0.24 0.41 16 24 C 0.03 0.11 12.03 85.24 1.03 1.13 16 25 N -0.34 -2.66 12.58 -57.02 -0.72 -3.38 16 26 C -0.14 0.70 7.44 31.12 0.23 0.93 16 27 C -0.16 0.53 9.03 22.36 0.20 0.73 16 28 C -0.16 0.47 9.03 22.36 0.20 0.67 16 29 H 0.06 -0.56 7.66 -2.39 -0.02 -0.57 16 30 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 31 H 0.07 -0.63 7.66 -2.39 -0.02 -0.65 16 32 H 0.14 0.25 4.86 -2.91 -0.01 0.24 16 33 H 0.11 0.90 7.82 -2.39 -0.02 0.88 16 34 H 0.38 1.11 8.70 -74.06 -0.64 0.47 16 35 H -0.27 -1.32 6.69 99.48 0.67 -0.65 16 36 H -0.30 -3.00 7.11 99.48 0.71 -2.30 16 37 H 0.13 -1.48 7.66 -2.39 -0.02 -1.50 16 38 H 0.12 -1.22 7.66 -2.39 -0.02 -1.24 16 39 H 0.42 -6.43 8.47 -92.71 -0.79 -7.22 16 40 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 41 H 0.07 -0.23 7.85 -2.39 -0.02 -0.25 16 42 H 0.12 -1.41 7.90 -2.39 -0.02 -1.43 16 43 H 0.10 -1.28 6.97 -2.39 -0.02 -1.30 16 44 H 0.21 -2.50 6.66 -2.92 -0.02 -2.52 16 45 H 0.17 -0.83 8.06 -2.91 -0.02 -0.85 16 46 H 0.20 -0.27 8.06 -2.91 -0.02 -0.30 16 47 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 48 H 0.11 -0.75 8.10 -2.38 -0.02 -0.77 16 49 H 0.17 -1.81 6.29 -2.91 -0.02 -1.83 16 50 H 0.16 -1.39 6.29 -2.91 -0.02 -1.40 16 Total: 0.00 -34.94 412.43 0.14 -34.80 By element: Atomic # 1 Polarization: -25.44 SS G_CDS: -0.43 Total: -25.87 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 6.33 Total: 8.85 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -4.52 Total: -2.62 kcal Atomic # 8 Polarization: -15.94 SS G_CDS: -3.30 Total: -19.24 kcal Atomic # 14 Polarization: 2.01 SS G_CDS: 2.07 Total: 4.08 kcal Total: -34.94 0.14 -34.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.346 kcal (2) G-P(sol) polarization free energy of solvation -34.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.801 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds