Wall clock time and date at job start Sun Mar 7 2021 14:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.47379 * 2 1 4 4 C 1.50703 * 109.46711 * 119.99792 * 2 1 3 5 5 C 1.38250 * 119.93693 * 64.99669 * 4 2 1 6 6 C 1.38237 * 120.04077 * 179.97438 * 5 4 2 7 7 Br 1.89098 * 120.03498 * 180.02562 * 6 5 4 8 8 C 1.38790 * 119.93072 * 0.02562 * 6 5 4 9 9 O 1.35916 * 120.06134 * 179.97438 * 8 6 5 10 10 C 1.42908 * 117.00118 * 180.02562 * 9 8 6 11 11 C 1.50697 * 109.46928 * 179.97438 * 10 9 8 12 12 O 1.21282 * 120.00293 * 0.02562 * 11 10 9 13 13 N 1.34778 * 120.00086 * 179.97438 * 11 10 9 14 14 C 1.46497 * 120.00247 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47096 * 180.02562 * 14 13 11 16 16 H 1.09007 * 112.85116 * 43.80582 * 15 14 13 17 17 C 1.53782 * 113.61449 * 175.00132 * 15 14 13 18 18 C 1.53780 * 87.08218 * 139.98553 * 17 15 14 19 19 H 1.08999 * 113.61600 * 219.94140 * 18 17 15 20 20 N 1.46501 * 113.61717 * 89.11411 * 18 17 15 21 21 C 1.34943 * 126.03927 * 275.00306 * 20 18 17 22 22 C 1.35310 * 107.74672 * 179.97438 * 21 20 18 23 23 C 1.39873 * 107.92370 * 359.97438 * 22 21 20 24 24 N 1.30841 * 108.19816 * 359.74279 * 23 22 21 25 25 C 1.53780 * 113.61950 * 272.50207 * 15 14 13 26 26 C 1.38725 * 119.88073 * 0.02562 * 8 6 5 27 27 C 1.38140 * 119.95169 * 359.97438 * 26 8 6 28 28 H 0.96699 * 114.00185 * 300.00943 * 1 2 3 29 29 H 1.08997 * 109.47403 * 239.99558 * 2 1 3 30 30 H 1.48495 * 109.99917 * 178.67519 * 3 2 1 31 31 H 1.48497 * 110.00051 * 299.99754 * 3 2 1 32 32 H 1.07994 * 119.97832 * 0.02562 * 5 4 2 33 33 H 1.09007 * 109.46399 * 299.99541 * 10 9 8 34 34 H 1.08993 * 109.46924 * 59.99475 * 10 9 8 35 35 H 0.97004 * 119.99693 * 0.02562 * 13 11 10 36 36 H 1.08999 * 109.47201 * 300.00485 * 14 13 11 37 37 H 1.09001 * 109.46711 * 60.00729 * 14 13 11 38 38 H 1.09002 * 113.61217 * 254.53045 * 17 15 14 39 39 H 1.08993 * 113.61640 * 25.43469 * 17 15 14 40 40 H 1.08006 * 126.12663 * 359.97438 * 21 20 18 41 41 H 1.08006 * 126.04295 * 180.02562 * 22 21 20 42 42 H 1.07997 * 125.90258 * 179.97438 * 23 22 21 43 43 H 1.09004 * 113.60887 * 334.56424 * 25 15 14 44 44 H 1.08995 * 113.62074 * 105.46789 * 25 15 14 45 45 H 1.08006 * 120.01988 * 179.72865 * 26 8 6 46 46 H 1.08001 * 119.95908 * 179.97438 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6838 -2.0603 1.3972 6 6 2.1440 -2.7142 2.5249 7 35 1.8060 -4.5608 2.7523 8 6 2.8543 -2.0140 3.4899 9 8 3.3075 -2.6541 4.6000 10 6 4.0306 -1.8702 5.5512 11 6 4.4496 -2.7428 6.7063 12 8 4.1582 -3.9200 6.7139 13 7 5.1491 -2.2151 7.7304 14 6 5.5560 -3.0631 8.8535 15 6 6.3302 -2.2239 9.8719 16 1 5.8663 -1.2562 10.0632 17 6 6.6994 -2.9936 11.1510 18 6 8.0575 -2.2744 11.0978 19 1 8.9003 -2.9126 11.3631 20 7 8.0704 -0.9915 11.8052 21 6 7.6821 0.1978 11.2996 22 6 7.8467 1.1304 12.2661 23 6 8.3524 0.4889 13.4015 24 7 8.4814 -0.7841 13.1282 25 6 7.8380 -2.1395 9.5816 26 6 3.1000 -0.6593 3.3201 27 6 2.6379 -0.0107 2.1913 28 1 -0.3933 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5347 1.7702 0.0323 31 1 1.5617 2.4679 -1.2085 32 1 1.1314 -2.6045 0.6456 33 1 4.9153 -1.4469 5.0755 34 1 3.3940 -1.0647 5.9170 35 1 5.3825 -1.2736 7.7241 36 1 4.6709 -3.4855 9.3291 37 1 6.1919 -3.8694 8.4881 38 1 6.0940 -2.7201 12.0152 39 1 6.7703 -4.0717 11.0068 40 1 7.3071 0.3739 10.3021 41 1 7.6258 2.1838 12.1770 42 1 8.5913 0.9619 14.3425 43 1 8.2202 -2.9842 9.0083 44 1 8.1520 -1.1766 9.1789 45 1 3.6487 -0.1112 4.0718 46 1 2.8287 1.0440 2.0592 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:59:02 Heat of formation + Delta-G solvation = 49.844559 kcal Electronic energy + Delta-G solvation = -30389.811233 eV Core-core repulsion = 25910.212167 eV Total energy + Delta-G solvation = -4479.599066 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.51878 -41.75439 -40.82718 -39.92673 -39.09843 -37.30109 -35.82201 -33.64252 -32.62592 -32.03517 -31.10606 -30.74891 -30.14187 -28.33452 -27.17217 -26.41518 -24.81081 -23.92664 -22.49063 -22.45557 -21.88887 -21.65310 -20.46147 -19.69656 -18.75686 -18.26674 -18.03571 -17.70767 -17.27049 -17.17463 -16.59727 -16.54803 -16.14146 -16.03615 -15.77065 -15.62687 -15.58930 -15.11199 -14.88373 -14.79570 -14.56316 -14.42580 -14.10467 -13.97592 -13.87974 -13.77808 -13.65380 -13.49455 -13.12093 -12.42212 -12.36998 -12.34241 -12.20523 -11.98767 -11.94006 -11.84657 -11.82424 -11.58992 -11.08629 -11.00002 -10.52665 -10.39143 -10.33110 -10.01745 -9.57411 -9.37187 -5.15707 -0.13134 0.02909 0.69168 0.88618 1.19003 1.24946 1.38278 1.39429 1.52108 1.88538 1.90555 2.30057 2.32543 2.92505 3.04025 3.25353 3.33731 3.35587 3.39880 3.50376 3.54751 3.62456 3.72705 3.73296 3.74421 3.84822 3.94124 3.98565 4.15205 4.24439 4.25510 4.33330 4.40880 4.42517 4.51739 4.52929 4.57362 4.65680 4.72299 4.72894 4.82212 4.86630 4.89541 5.05815 5.12890 5.13959 5.36251 5.68651 5.91273 6.02987 6.18848 6.48821 6.74285 6.96986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.064 4.064 3 Si 0.686 3.314 4 C -0.152 4.152 5 C -0.024 4.024 6 C -0.123 4.123 7 Br -0.025 7.025 8 C 0.160 3.840 9 O -0.274 6.274 10 C 0.037 3.963 11 C 0.515 3.485 12 O -0.505 6.505 13 N -0.727 5.727 14 C 0.132 3.868 15 C -0.128 4.128 16 H 0.101 0.899 17 C -0.136 4.136 18 C 0.134 3.866 19 H 0.113 0.887 20 N -0.356 5.356 21 C 0.051 3.949 22 C -0.273 4.273 23 C 0.045 3.955 24 N -0.293 5.293 25 C -0.139 4.139 26 C -0.201 4.201 27 C -0.059 4.059 28 H 0.380 0.620 29 H 0.116 0.884 30 H -0.256 1.256 31 H -0.253 1.253 32 H 0.144 0.856 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.402 0.598 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.082 0.918 39 H 0.107 0.893 40 H 0.170 0.830 41 H 0.148 0.852 42 H 0.184 0.816 43 H 0.111 0.889 44 H 0.082 0.918 45 H 0.141 0.859 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.431 7.361 1.274 7.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.175 4.175 3 Si 0.588 3.412 4 C -0.154 4.154 5 C -0.043 4.043 6 C -0.203 4.203 7 Br 0.061 6.939 8 C 0.112 3.888 9 O -0.185 6.185 10 C -0.042 4.042 11 C 0.299 3.701 12 O -0.378 6.378 13 N -0.382 5.382 14 C 0.009 3.991 15 C -0.146 4.146 16 H 0.119 0.881 17 C -0.175 4.175 18 C 0.031 3.969 19 H 0.131 0.869 20 N -0.138 5.138 21 C -0.095 4.095 22 C -0.302 4.302 23 C -0.141 4.141 24 N -0.113 5.113 25 C -0.177 4.177 26 C -0.220 4.220 27 C -0.077 4.077 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.181 1.181 31 H -0.177 1.177 32 H 0.162 0.838 33 H 0.115 0.885 34 H 0.116 0.884 35 H 0.236 0.764 36 H 0.093 0.907 37 H 0.094 0.906 38 H 0.101 0.899 39 H 0.125 0.875 40 H 0.187 0.813 41 H 0.166 0.834 42 H 0.201 0.799 43 H 0.129 0.871 44 H 0.100 0.900 45 H 0.159 0.841 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.995 4.567 0.819 5.050 hybrid contribution 0.150 1.402 -0.425 1.473 sum 2.145 5.969 0.394 6.355 Atomic orbital electron populations 1.86530 1.16928 1.81669 1.49260 1.25021 0.85383 1.09996 0.97068 0.94905 0.80918 0.77747 0.87621 1.20273 1.02508 0.94398 0.98188 1.20891 0.95174 0.93611 0.94665 1.21165 1.07889 0.93174 0.98076 1.96817 1.94719 1.04760 1.97599 1.18634 0.93057 0.90712 0.86404 1.86292 1.68005 1.36064 1.28158 1.22549 0.97945 0.94150 0.89524 1.19952 0.78644 0.88502 0.83032 1.90825 1.52962 1.16026 1.78012 1.45772 1.57472 1.13667 1.21300 1.21390 0.99404 0.92915 0.85361 1.22963 0.95276 1.00473 0.95917 0.88096 1.23382 0.95694 1.00741 0.97649 1.22039 1.00129 0.82612 0.92153 0.86901 1.48395 1.49556 1.06260 1.09623 1.22450 1.01082 0.85737 1.00243 1.21568 1.13602 1.00914 0.94114 1.23981 0.99066 0.91044 1.00008 1.77435 1.21966 1.18391 0.93527 1.23533 0.95632 1.04587 0.93933 1.21164 1.06902 0.92833 1.01097 1.20907 0.94993 0.99337 0.92473 0.77303 0.86710 1.18133 1.17737 0.83837 0.88492 0.88410 0.76408 0.90654 0.90558 0.89923 0.87455 0.81261 0.83396 0.79865 0.87109 0.89963 0.84121 0.84602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.33 12.83 -35.23 -0.45 -0.12 16 2 C -0.06 0.08 2.80 36.01 0.10 0.18 16 3 Si 0.69 -1.64 29.80 -169.99 -5.07 -6.71 16 4 C -0.15 0.13 5.35 -104.60 -0.56 -0.43 16 5 C -0.02 -0.02 9.42 -39.58 -0.37 -0.39 16 6 C -0.12 -0.24 6.24 -39.38 -0.25 -0.49 16 7 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.34 16 8 C 0.16 0.14 6.68 -39.20 -0.26 -0.12 16 9 O -0.27 -0.48 9.01 -39.39 -0.35 -0.83 16 10 C 0.04 -0.10 5.22 36.00 0.19 0.09 16 11 C 0.51 -0.10 7.91 -10.99 -0.09 -0.19 16 12 O -0.51 -2.64 16.50 -14.35 -0.24 -2.87 16 13 N -0.73 2.70 5.56 -60.30 -0.33 2.37 16 14 C 0.13 -0.42 5.51 -4.05 -0.02 -0.44 16 15 C -0.13 0.60 3.33 -89.81 -0.30 0.30 16 16 H 0.10 -0.50 6.98 -51.93 -0.36 -0.86 16 17 C -0.14 0.43 7.44 -25.92 -0.19 0.24 16 18 C 0.13 -0.30 5.18 -67.12 -0.35 -0.65 16 19 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 20 N -0.36 -0.10 3.79 -54.07 -0.21 -0.31 16 21 C 0.05 -0.06 9.62 -17.23 -0.17 -0.23 16 22 C -0.27 0.07 10.80 -40.01 -0.43 -0.36 16 23 C 0.05 0.05 12.03 -17.36 -0.21 -0.16 16 24 N -0.29 -0.88 12.58 30.63 0.39 -0.50 16 25 C -0.14 0.67 6.88 -25.92 -0.18 0.49 16 26 C -0.20 0.41 9.04 -39.44 -0.36 0.05 16 27 C -0.06 0.14 8.66 -39.61 -0.34 -0.21 16 28 H 0.38 -1.72 8.70 45.56 0.40 -1.32 16 29 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 0.06 7.11 56.52 0.40 0.46 16 31 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 32 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 33 H 0.10 -0.52 7.67 -51.93 -0.40 -0.91 16 34 H 0.10 -0.53 7.66 -51.93 -0.40 -0.93 16 35 H 0.40 -2.82 8.47 -40.82 -0.35 -3.17 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.08 -0.18 7.84 -51.93 -0.41 -0.59 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.11 -0.44 8.10 -51.93 -0.42 -0.86 16 40 H 0.17 -0.80 6.67 -52.48 -0.35 -1.15 16 41 H 0.15 -0.32 8.06 -52.48 -0.42 -0.75 16 42 H 0.18 -0.27 8.06 -52.49 -0.42 -0.69 16 43 H 0.11 -0.59 7.90 -51.93 -0.41 -1.00 16 44 H 0.08 -0.43 6.97 -51.93 -0.36 -0.79 16 45 H 0.14 -0.75 6.30 -52.48 -0.33 -1.08 16 46 H 0.14 -0.65 4.90 -52.49 -0.26 -0.91 16 LS Contribution 404.25 15.07 6.09 6.09 Total: 0.00 -12.57 404.25 -12.00 -24.57 By element: Atomic # 1 Polarization: -11.27 SS G_CDS: -5.79 Total: -17.06 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -3.78 Total: -2.30 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -0.15 Total: 1.57 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -1.04 Total: -3.82 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.07 Total: -6.71 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -12.57 -12.00 -24.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.417 kcal (2) G-P(sol) polarization free energy of solvation -12.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.573 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds