Wall clock time and date at job start Sun Mar 7 2021 14:59:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46903 * 110.99450 * 2 1 4 4 C 1.50692 * 109.47514 * 293.95121 * 3 2 1 5 5 O 1.21281 * 120.00074 * 0.02562 * 4 3 2 6 6 N 1.34774 * 120.00174 * 180.02562 * 4 3 2 7 7 C 1.46505 * 120.00091 * 180.02562 * 6 4 3 8 8 C 1.53001 * 109.46958 * 179.97438 * 7 6 4 9 9 H 1.08998 * 112.84877 * 43.80772 * 8 7 6 10 10 C 1.53788 * 113.61220 * 174.99837 * 8 7 6 11 11 C 1.53785 * 87.07827 * 139.98048 * 10 8 7 12 12 H 1.08999 * 113.61523 * 220.01598 * 11 10 8 13 13 N 1.46503 * 113.61185 * 89.20149 * 11 10 8 14 14 C 1.34949 * 126.03857 * 274.71325 * 13 11 10 15 15 C 1.35311 * 107.74629 * 179.83746 * 14 13 11 16 16 C 1.39865 * 107.92047 * 0.42580 * 15 14 13 17 17 N 1.30839 * 108.20525 * 359.73451 * 16 15 14 18 18 C 1.53776 * 113.61430 * 272.49620 * 8 7 6 19 19 C 1.39674 * 110.99923 * 123.95222 * 2 1 3 20 20 C 1.38892 * 120.06925 * 116.04833 * 19 2 1 21 21 C 1.50702 * 120.03911 * 0.02811 * 20 19 2 22 22 O 1.42908 * 109.46645 * 284.71706 * 21 20 19 23 23 Si 1.86298 * 109.46915 * 164.72454 * 21 20 19 24 24 C 1.38126 * 119.92083 * 179.74515 * 20 19 2 25 25 C 1.38265 * 120.07410 * 0.27899 * 24 20 19 26 26 C 1.50700 * 119.92460 * 179.97438 * 25 24 20 27 27 F 1.39902 * 109.47129 * 89.99474 * 26 25 24 28 28 F 1.39891 * 109.47570 * 210.00156 * 26 25 24 29 29 F 1.39908 * 109.47164 * 330.00064 * 26 25 24 30 30 C 1.38303 * 120.15041 * 359.97438 * 25 24 20 31 31 C 1.38076 * 120.07651 * 359.97438 * 30 25 24 32 32 H 1.08998 * 109.47809 * 296.04421 * 1 2 3 33 33 H 1.09006 * 109.47028 * 56.04783 * 1 2 3 34 34 H 1.09004 * 109.47162 * 176.03951 * 1 2 3 35 35 H 1.08999 * 109.46949 * 53.95392 * 3 2 1 36 36 H 1.08999 * 109.46553 * 173.94997 * 3 2 1 37 37 H 0.96995 * 119.99892 * 0.02562 * 6 4 3 38 38 H 1.08999 * 109.47138 * 299.99875 * 7 6 4 39 39 H 1.08997 * 109.46761 * 60.00234 * 7 6 4 40 40 H 1.08990 * 113.61376 * 254.53028 * 10 8 7 41 41 H 1.08995 * 113.61178 * 25.43756 * 10 8 7 42 42 H 1.08007 * 126.12327 * 0.02562 * 14 13 11 43 43 H 1.08006 * 126.04189 * 180.15790 * 15 14 13 44 44 H 1.08004 * 125.90343 * 179.71270 * 16 15 14 45 45 H 1.08998 * 113.61736 * 334.56997 * 18 8 7 46 46 H 1.08997 * 113.61585 * 105.47659 * 18 8 7 47 47 H 1.08996 * 109.47312 * 44.71797 * 21 20 19 48 48 H 0.96699 * 113.99775 * 60.00016 * 22 21 20 49 49 H 1.48506 * 109.99834 * 178.68053 * 23 21 20 50 50 H 1.48502 * 110.00011 * 299.99318 * 23 21 20 51 51 H 1.07995 * 119.96267 * 180.25167 * 24 20 19 52 52 H 1.08003 * 119.96055 * 179.97438 * 30 25 24 53 53 H 1.07995 * 120.04022 * 180.02562 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6369 2.0472 -1.2984 5 8 1.0047 1.4457 -2.1407 6 7 2.0187 3.3199 -1.5236 7 6 1.6698 3.9770 -2.7857 8 6 2.2181 5.4054 -2.7856 9 1 3.2379 5.4673 -2.4058 10 6 2.0111 6.1447 -4.1181 11 6 1.6790 7.3930 -3.2835 12 1 0.8532 7.9799 -3.6855 13 7 2.8508 8.2091 -2.9566 14 6 3.6823 8.0214 -1.9104 15 6 4.6356 8.9802 -1.9640 16 6 4.3723 9.7872 -3.0756 17 7 3.3027 9.3259 -3.6714 18 6 1.2613 6.4325 -2.1575 19 6 1.9696 -0.7283 1.0817 20 6 2.7117 -1.8813 0.8605 21 6 2.9787 -2.3482 -0.5472 22 8 1.7938 -2.9378 -1.0863 23 14 4.3492 -3.6101 -0.5334 24 6 3.2097 -2.5962 1.9323 25 6 2.9652 -2.1684 3.2242 26 6 3.5096 -2.9514 4.3911 27 9 4.7815 -2.4716 4.7218 28 9 2.6560 -2.8054 5.4897 29 9 3.5971 -4.3041 4.0450 30 6 2.2221 -1.0237 3.4480 31 6 1.7222 -0.3036 2.3811 32 1 -0.3634 0.4512 0.9232 33 1 -0.3633 0.5740 -0.8525 34 1 -0.3634 -1.0252 -0.0710 35 1 1.5609 1.9273 0.8309 36 1 3.0796 1.3445 0.1083 37 1 2.5246 3.8009 -0.8501 38 1 2.1034 3.4210 -3.6168 39 1 0.5855 4.0045 -2.8932 40 1 2.9219 6.2438 -4.7085 41 1 1.1678 5.7706 -4.6986 42 1 3.6029 7.2432 -1.1656 43 1 5.4527 9.1034 -1.2686 44 1 4.9516 10.6435 -3.3881 45 1 0.2131 6.1370 -2.2020 46 1 1.5669 6.7640 -1.1652 47 1 3.2737 -1.4980 -1.1622 48 1 1.0374 -2.3366 -1.1236 49 1 4.6005 -4.1020 -1.9119 50 1 5.5872 -3.0094 0.0250 51 1 3.7903 -3.4906 1.7611 52 1 2.0326 -0.6925 4.4584 53 1 1.1424 0.5904 2.5565 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:59:04 Heat of formation + Delta-G solvation = -53.439990 kcal Electronic energy + Delta-G solvation = -41144.632470 eV Core-core repulsion = 35378.654151 eV Total energy + Delta-G solvation = -5765.978320 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.171 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -51.18038 -48.69511 -48.65207 -42.42824 -41.77337 -40.70188 -39.73167 -37.69489 -37.59522 -35.64258 -33.01424 -32.54403 -32.09095 -31.04964 -30.15909 -28.19483 -27.50819 -26.95145 -26.90032 -25.18130 -24.40334 -23.32224 -22.33706 -22.04582 -21.76020 -21.36348 -20.28596 -19.54190 -19.48782 -19.42960 -18.48528 -18.15567 -17.99411 -17.73321 -17.13980 -16.87430 -16.64156 -16.36531 -16.23465 -15.98565 -15.61285 -15.58732 -15.52472 -15.41407 -15.28615 -15.14554 -15.07224 -14.99423 -14.84659 -14.79918 -14.66099 -14.49947 -14.39038 -14.21601 -13.99642 -13.85114 -13.63740 -13.57573 -13.28437 -13.20463 -13.03477 -12.90648 -12.77463 -12.57612 -12.20905 -12.11575 -11.79004 -11.60838 -11.52503 -11.42454 -11.20701 -10.89801 -10.39135 -10.22068 -10.11757 -10.07777 -9.65902 -9.53330 -4.96388 -0.35851 0.02358 0.93399 1.30334 1.51653 1.54050 1.59825 1.60986 1.91274 1.91469 1.92413 2.18121 2.63275 2.73883 2.95586 3.16943 3.30355 3.37229 3.49740 3.53110 3.64684 3.67694 3.74224 3.85924 3.90363 4.02519 4.03612 4.04433 4.08604 4.16933 4.18654 4.29411 4.33392 4.36237 4.45644 4.47640 4.53250 4.63473 4.63992 4.68839 4.70653 4.75589 4.85856 4.87645 4.89606 4.96745 4.98649 5.01571 5.11314 5.13789 5.19882 5.39238 5.44222 5.57394 5.71912 6.08400 6.16496 6.53007 6.58553 6.74808 7.24817 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.508 5.508 3 C 0.039 3.961 4 C 0.512 3.488 5 O -0.562 6.562 6 N -0.717 5.717 7 C 0.137 3.863 8 C -0.110 4.110 9 H 0.106 0.894 10 C -0.137 4.137 11 C 0.118 3.882 12 H 0.105 0.895 13 N -0.360 5.360 14 C 0.056 3.944 15 C -0.290 4.290 16 C 0.031 3.969 17 N -0.344 5.344 18 C -0.120 4.120 19 C 0.130 3.870 20 C -0.100 4.100 21 C -0.065 4.065 22 O -0.545 6.545 23 Si 0.781 3.219 24 C -0.062 4.062 25 C -0.185 4.185 26 C 0.508 3.492 27 F -0.181 7.181 28 F -0.178 7.178 29 F -0.178 7.178 30 C -0.053 4.053 31 C -0.137 4.137 32 H 0.049 0.951 33 H 0.081 0.919 34 H 0.072 0.928 35 H 0.103 0.897 36 H 0.118 0.882 37 H 0.416 0.584 38 H 0.053 0.947 39 H 0.070 0.930 40 H 0.060 0.940 41 H 0.115 0.885 42 H 0.206 0.794 43 H 0.165 0.835 44 H 0.197 0.803 45 H 0.121 0.879 46 H 0.095 0.905 47 H 0.076 0.924 48 H 0.372 0.628 49 H -0.295 1.295 50 H -0.259 1.259 51 H 0.150 0.850 52 H 0.157 0.843 53 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.151 3.857 5.748 7.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.230 5.230 3 C -0.091 4.091 4 C 0.298 3.702 5 O -0.440 6.440 6 N -0.371 5.371 7 C 0.013 3.987 8 C -0.129 4.129 9 H 0.125 0.875 10 C -0.176 4.176 11 C 0.016 3.984 12 H 0.123 0.877 13 N -0.142 5.142 14 C -0.090 4.090 15 C -0.319 4.319 16 C -0.154 4.154 17 N -0.165 5.165 18 C -0.158 4.158 19 C 0.036 3.964 20 C -0.101 4.101 21 C -0.174 4.174 22 O -0.352 6.352 23 Si 0.684 3.316 24 C -0.081 4.081 25 C -0.186 4.186 26 C 0.454 3.546 27 F -0.162 7.162 28 F -0.159 7.159 29 F -0.159 7.159 30 C -0.072 4.072 31 C -0.157 4.157 32 H 0.068 0.932 33 H 0.100 0.900 34 H 0.091 0.909 35 H 0.121 0.879 36 H 0.136 0.864 37 H 0.253 0.747 38 H 0.071 0.929 39 H 0.089 0.911 40 H 0.079 0.921 41 H 0.133 0.867 42 H 0.223 0.777 43 H 0.182 0.818 44 H 0.214 0.786 45 H 0.140 0.860 46 H 0.114 0.886 47 H 0.093 0.907 48 H 0.222 0.778 49 H -0.223 1.223 50 H -0.184 1.184 51 H 0.167 0.833 52 H 0.174 0.826 53 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -1.211 2.562 3.367 4.401 hybrid contribution 0.201 1.969 0.938 2.190 sum -1.010 4.532 4.305 6.331 Atomic orbital electron populations 1.22639 0.83783 1.03567 1.02279 1.59166 1.10084 1.13360 1.40380 1.22146 1.03296 0.88142 0.95475 1.20728 0.78805 0.81703 0.88924 1.90722 1.40741 1.64891 1.47659 1.45824 1.57769 1.13190 1.20280 1.21233 1.00196 0.91415 0.85838 1.22804 1.00518 0.92402 0.97155 0.87548 1.23385 1.03380 0.94058 0.96753 1.22282 0.85312 0.90749 1.00044 0.87693 1.48588 1.22714 1.22334 1.20612 1.23047 0.91436 1.01319 0.93166 1.21895 1.05587 1.00567 1.03864 1.24370 0.94902 1.00893 0.95233 1.77347 1.16201 1.01540 1.21457 1.23481 1.01805 0.92791 0.97748 1.18853 0.95116 0.93057 0.89392 1.20178 0.99019 0.95193 0.95747 1.25297 0.96440 1.05114 0.90538 1.86687 1.21462 1.41931 1.85094 0.92569 0.73112 0.83945 0.82016 1.20814 0.97741 0.98933 0.90564 1.19976 1.06426 0.99947 0.92270 1.18352 0.75634 0.77818 0.82770 1.93236 1.41539 1.88002 1.93429 1.93199 1.70463 1.95489 1.56745 1.93212 1.96096 1.34616 1.91963 1.21107 0.93003 0.91633 1.01419 1.21862 1.00810 1.01693 0.91355 0.93228 0.90042 0.90934 0.87883 0.86359 0.74675 0.92870 0.91132 0.92099 0.86709 0.77709 0.81794 0.78617 0.86050 0.88645 0.90692 0.77841 1.22274 1.18395 0.83263 0.82556 0.82142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 8.76 127.69 1.12 1.02 16 2 N -0.51 1.94 3.23 -724.43 -2.34 -0.40 16 3 C 0.04 -0.32 5.03 85.55 0.43 0.11 16 4 C 0.51 -1.78 7.52 87.65 0.66 -1.12 16 5 O -0.56 -3.38 14.33 -3.03 -0.04 -3.42 16 6 N -0.72 6.58 5.56 -463.06 -2.57 4.01 16 7 C 0.14 -0.98 5.51 86.38 0.48 -0.51 16 8 C -0.11 1.12 3.34 -10.27 -0.03 1.08 16 9 H 0.11 -1.17 7.00 -2.39 -0.02 -1.19 16 10 C -0.14 0.79 7.44 31.12 0.23 1.02 16 11 C 0.12 -0.51 5.18 45.52 0.24 -0.28 16 12 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 13 N -0.36 -0.37 3.79 -324.97 -1.23 -1.61 16 14 C 0.06 -0.17 9.63 83.54 0.80 0.63 16 15 C -0.29 0.11 10.80 21.99 0.24 0.35 16 16 C 0.03 0.11 12.02 85.23 1.02 1.13 16 17 N -0.34 -2.61 12.58 -57.02 -0.72 -3.33 16 18 C -0.12 1.35 6.88 31.12 0.21 1.57 16 19 C 0.13 -0.49 4.63 38.21 0.18 -0.31 16 20 C -0.10 0.06 5.28 -19.73 -0.10 -0.04 16 21 C -0.07 -0.14 2.30 71.24 0.16 0.02 16 22 O -0.54 -2.63 12.65 -148.98 -1.89 -4.52 16 23 Si 0.78 1.34 30.17 68.60 2.07 3.41 16 24 C -0.06 0.07 8.01 22.25 0.18 0.24 16 25 C -0.18 0.31 5.46 -19.84 -0.11 0.20 16 26 C 0.51 0.29 3.36 71.24 0.24 0.53 16 27 F -0.18 -0.41 17.30 44.97 0.78 0.36 16 28 F -0.18 -0.21 16.46 44.97 0.74 0.53 16 29 F -0.18 -0.35 16.46 44.97 0.74 0.39 16 30 C -0.05 0.29 9.39 22.25 0.21 0.50 16 31 C -0.14 1.00 8.66 22.40 0.19 1.19 16 32 H 0.05 -0.38 7.33 -2.39 -0.02 -0.40 16 33 H 0.08 0.00 5.82 -2.38 -0.01 -0.02 16 34 H 0.07 -0.25 7.43 -2.38 -0.02 -0.27 16 35 H 0.10 -1.45 7.49 -2.39 -0.02 -1.47 16 36 H 0.12 -1.21 8.06 -2.39 -0.02 -1.23 16 37 H 0.42 -6.48 8.47 -92.71 -0.79 -7.27 16 38 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 39 H 0.07 -0.42 7.84 -2.39 -0.02 -0.43 16 40 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.11 -0.88 8.10 -2.39 -0.02 -0.90 16 42 H 0.21 -2.40 6.68 -2.91 -0.02 -2.42 16 43 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 44 H 0.20 -0.27 8.06 -2.91 -0.02 -0.29 16 45 H 0.12 -1.57 7.89 -2.39 -0.02 -1.59 16 46 H 0.10 -1.27 6.97 -2.39 -0.02 -1.29 16 47 H 0.08 0.26 7.77 -2.39 -0.02 0.24 16 48 H 0.37 0.83 7.56 -74.06 -0.56 0.27 16 49 H -0.30 -2.68 7.11 99.48 0.71 -1.97 16 50 H -0.26 -0.83 7.11 99.48 0.71 -0.13 16 51 H 0.15 -0.44 4.67 -2.91 -0.01 -0.46 16 52 H 0.16 -1.37 7.60 -2.91 -0.02 -1.39 16 53 H 0.16 -2.01 7.14 -2.91 -0.02 -2.03 16 Total: 0.00 -24.37 440.30 1.57 -22.80 By element: Atomic # 1 Polarization: -25.28 SS G_CDS: -0.31 Total: -25.58 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: 6.35 Total: 7.35 kcal Atomic # 7 Polarization: 5.53 SS G_CDS: -6.87 Total: -1.33 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.93 Total: -7.94 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 2.26 Total: 1.28 kcal Atomic # 14 Polarization: 1.34 SS G_CDS: 2.07 Total: 3.41 kcal Total: -24.37 1.57 -22.80 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.640 kcal (2) G-P(sol) polarization free energy of solvation -24.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.800 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.440 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.99 seconds