Wall clock time and date at job start Sun Mar 7 2021 14:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86291 * 109.47342 * 2 1 4 4 C 1.50705 * 109.47145 * 239.99839 * 2 1 3 5 5 C 1.35447 * 125.56612 * 119.97993 * 4 2 1 6 6 C 1.39833 * 107.86968 * 179.76212 * 5 4 2 7 7 C 1.37875 * 107.07983 * 0.41174 * 6 5 4 8 8 C 1.46679 * 126.23037 * 179.84563 * 7 6 5 9 9 O 1.21689 * 120.00118 * 359.69258 * 8 7 6 10 10 N 1.34783 * 120.00013 * 179.69340 * 8 7 6 11 11 C 1.46498 * 120.00214 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.47070 * 179.97438 * 11 10 8 13 13 H 1.08994 * 112.91116 * 43.74800 * 12 11 10 14 14 C 1.53787 * 113.61251 * 175.00109 * 12 11 10 15 15 C 1.53779 * 87.07963 * 139.97890 * 14 12 11 16 16 H 1.09007 * 113.61383 * 220.01369 * 15 14 12 17 17 N 1.46506 * 113.61276 * 89.20243 * 15 14 12 18 18 C 1.34952 * 126.03298 * 274.70962 * 17 15 14 19 19 C 1.35311 * 107.74382 * 179.84320 * 18 17 15 20 20 C 1.39873 * 107.91934 * 0.42554 * 19 18 17 21 21 N 1.30835 * 108.20206 * 359.73758 * 20 19 18 22 22 C 1.53779 * 87.08402 * 334.56577 * 15 14 12 23 23 N 1.35539 * 125.56334 * 299.99880 * 4 2 1 24 24 H 0.96702 * 114.00082 * 60.00037 * 1 2 3 25 25 H 1.09000 * 109.47213 * 120.00421 * 2 1 3 26 26 H 1.48499 * 110.00260 * 59.99812 * 3 2 1 27 27 H 1.48504 * 110.00182 * 181.32113 * 3 2 1 28 28 H 1.08003 * 126.06454 * 0.02562 * 5 4 2 29 29 H 1.07994 * 126.46278 * 180.26109 * 6 5 4 30 30 H 0.96997 * 119.99499 * 0.02562 * 10 8 7 31 31 H 1.08998 * 109.46965 * 59.99571 * 11 10 8 32 32 H 1.09003 * 109.46664 * 299.99726 * 11 10 8 33 33 H 1.08997 * 113.61028 * 254.52850 * 14 12 11 34 34 H 1.08998 * 113.61447 * 25.34385 * 14 12 11 35 35 H 1.07997 * 126.12492 * 0.02562 * 18 17 15 36 36 H 1.08000 * 126.04363 * 180.16185 * 19 18 17 37 37 H 1.08003 * 125.89293 * 179.72132 * 20 19 18 38 38 H 1.09002 * 113.61557 * 270.88569 * 22 15 14 39 39 H 1.09004 * 113.61501 * 139.97990 * 22 15 14 40 40 H 0.97000 * 125.67721 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7130 -0.1636 -2.1920 6 6 2.9613 -1.1475 -3.1541 7 6 2.3018 -2.2877 -2.7469 8 6 2.2783 -3.5740 -3.4515 9 8 2.8764 -3.7026 -4.5034 10 7 1.5941 -4.6135 -2.9338 11 6 1.5710 -5.8983 -3.6372 12 6 0.7311 -6.9000 -2.8421 13 1 -0.1975 -6.4709 -2.4659 14 6 0.5416 -8.2488 -3.5561 15 6 0.7289 -8.9132 -2.1820 16 1 1.3254 -9.8250 -2.2155 17 7 -0.5204 -9.0779 -1.4347 18 6 -1.1003 -8.1511 -0.6435 19 6 -2.2354 -8.6897 -0.1412 20 6 -2.3482 -9.9936 -0.6347 21 7 -1.3206 -10.2274 -1.4102 22 6 1.5320 -7.6662 -1.7760 23 7 1.6744 -2.0009 -1.5558 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8899 26 1 1.5615 2.4679 1.2084 27 1 3.5346 1.7702 -0.0322 28 1 3.0828 0.8510 -2.2100 29 1 3.5554 -1.0347 -4.0489 30 1 1.1170 -4.5108 -2.0955 31 1 2.5885 -6.2762 -3.7370 32 1 1.1350 -5.7628 -4.6270 33 1 -0.4555 -8.3849 -3.9747 34 1 1.3344 -8.4817 -4.2670 35 1 -0.7269 -7.1566 -0.4488 36 1 -2.9294 -8.2009 0.5266 37 1 -3.1456 -10.6876 -0.4136 38 1 2.5963 -7.7405 -1.9992 39 1 1.3343 -7.3320 -0.7575 40 1 1.1371 -2.6191 -1.0361 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:59:11 Heat of formation + Delta-G solvation = 91.900966 kcal Electronic energy + Delta-G solvation = -23846.891115 eV Core-core repulsion = 20245.953796 eV Total energy + Delta-G solvation = -3600.937320 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.60749 -42.45621 -40.59379 -39.65091 -37.83684 -35.83070 -32.72929 -32.14839 -31.48532 -31.05496 -29.14929 -27.18084 -26.75459 -24.77855 -23.06121 -22.45566 -21.83823 -21.59257 -21.14907 -20.52177 -19.85333 -18.27608 -18.04105 -17.29783 -16.88215 -16.72733 -16.37699 -16.10380 -15.72796 -15.62143 -15.25091 -15.13219 -14.99155 -14.62422 -14.42939 -14.34646 -14.05349 -13.99187 -13.75664 -13.67013 -13.48894 -13.10318 -12.36413 -12.29380 -12.10730 -11.96271 -11.83828 -11.59535 -11.21640 -10.80946 -10.38675 -10.32199 -10.12655 -9.57044 -9.30708 -5.09913 0.30893 0.88947 1.06659 1.39685 1.48769 1.60075 1.79300 1.90836 1.91015 2.08962 2.33332 2.93589 3.05861 3.21998 3.30946 3.40125 3.47675 3.72074 3.73508 3.86638 3.94927 4.14689 4.17572 4.22215 4.26729 4.33863 4.34830 4.42729 4.54645 4.58841 4.66848 4.73386 4.82699 4.90379 4.95396 5.03619 5.06387 5.17726 5.53573 5.69178 5.77389 6.03180 6.13102 6.31015 6.32984 6.74675 7.04045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.055 4.055 3 Si 0.722 3.278 4 C 0.022 3.978 5 C -0.200 4.200 6 C -0.097 4.097 7 C -0.053 4.053 8 C 0.590 3.410 9 O -0.523 6.523 10 N -0.732 5.732 11 C 0.132 3.868 12 C -0.129 4.129 13 H 0.099 0.901 14 C -0.135 4.135 15 C 0.134 3.866 16 H 0.113 0.887 17 N -0.356 5.356 18 C 0.050 3.950 19 C -0.272 4.272 20 C 0.045 3.955 21 N -0.292 5.292 22 C -0.139 4.139 23 N -0.524 5.524 24 H 0.384 0.616 25 H 0.115 0.885 26 H -0.253 1.253 27 H -0.253 1.253 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.394 0.606 31 H 0.077 0.923 32 H 0.076 0.924 33 H 0.082 0.918 34 H 0.108 0.892 35 H 0.169 0.831 36 H 0.148 0.852 37 H 0.185 0.815 38 H 0.111 0.889 39 H 0.080 0.920 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.443 2.907 1.861 3.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.096 4.096 5 C -0.224 4.224 6 C -0.123 4.123 7 C -0.166 4.166 8 C 0.377 3.623 9 O -0.398 6.398 10 N -0.384 5.384 11 C 0.008 3.992 12 C -0.147 4.147 13 H 0.117 0.883 14 C -0.174 4.174 15 C 0.031 3.969 16 H 0.131 0.869 17 N -0.138 5.138 18 C -0.095 4.095 19 C -0.302 4.302 20 C -0.141 4.141 21 N -0.113 5.113 22 C -0.177 4.177 23 N -0.120 5.120 24 H 0.232 0.768 25 H 0.132 0.868 26 H -0.178 1.178 27 H -0.177 1.177 28 H 0.169 0.831 29 H 0.171 0.829 30 H 0.227 0.773 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.101 0.899 34 H 0.126 0.874 35 H 0.186 0.814 36 H 0.166 0.834 37 H 0.202 0.798 38 H 0.129 0.871 39 H 0.099 0.901 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.190 2.087 1.287 2.459 hybrid contribution -0.943 -0.367 1.427 1.749 sum -0.753 1.720 2.714 3.300 Atomic orbital electron populations 1.86496 1.17001 1.81760 1.49685 1.24972 0.85221 1.11080 0.95294 0.93975 0.81083 0.75916 0.86892 1.21159 1.03745 0.85100 0.99575 1.20726 1.05123 1.00624 0.95958 1.21345 1.00198 0.90580 1.00206 1.20444 1.08110 0.96743 0.91297 1.17051 0.78831 0.81935 0.84445 1.90885 1.44034 1.82897 1.21998 1.45865 1.53855 1.12048 1.26650 1.21388 1.00525 0.81453 0.95784 1.22966 0.99336 0.95106 0.97321 0.88267 1.23372 1.04425 0.93532 0.96029 1.22031 0.82337 1.00136 0.92385 0.86880 1.48390 1.19052 1.10025 1.36353 1.22438 0.95292 0.96286 0.95529 1.21568 1.01278 0.96800 1.10513 1.23980 0.97223 0.96907 0.95969 1.77425 1.05118 1.05810 1.22925 1.23538 1.00385 0.93826 0.99995 1.41926 1.40241 1.11113 1.18732 0.76831 0.86755 1.17814 1.17685 0.83113 0.82917 0.77279 0.90514 0.90578 0.89920 0.87398 0.81386 0.83392 0.79826 0.87077 0.90108 0.74690 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.12 12.88 -35.23 -0.45 0.67 16 2 C -0.06 0.13 3.08 36.01 0.11 0.24 16 3 Si 0.72 -1.98 30.54 -169.99 -5.19 -7.17 16 4 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 5 C -0.20 0.13 9.32 -39.98 -0.37 -0.25 16 6 C -0.10 -0.11 10.65 -39.12 -0.42 -0.52 16 7 C -0.05 -0.04 7.06 -81.98 -0.58 -0.62 16 8 C 0.59 1.00 7.79 -12.85 -0.10 0.90 16 9 O -0.52 -2.97 16.88 5.20 0.09 -2.88 16 10 N -0.73 1.34 5.55 -61.62 -0.34 1.00 16 11 C 0.13 -0.28 5.51 -4.04 -0.02 -0.30 16 12 C -0.13 0.47 3.34 -89.80 -0.30 0.17 16 13 H 0.10 -0.37 7.00 -51.93 -0.36 -0.74 16 14 C -0.13 0.35 7.44 -25.92 -0.19 0.15 16 15 C 0.13 -0.21 5.18 -67.12 -0.35 -0.56 16 16 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 17 N -0.36 -0.33 3.79 -54.07 -0.21 -0.54 16 18 C 0.05 -0.02 9.63 -17.22 -0.17 -0.19 16 19 C -0.27 -0.11 10.80 -40.01 -0.43 -0.55 16 20 C 0.05 0.07 12.03 -17.36 -0.21 -0.13 16 21 N -0.29 -1.03 12.58 30.63 0.39 -0.64 16 22 C -0.14 0.54 6.88 -25.92 -0.18 0.36 16 23 N -0.52 0.87 5.99 -5.69 -0.03 0.84 16 24 H 0.38 -2.09 8.70 45.56 0.40 -1.70 16 25 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 26 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 27 H -0.25 0.04 7.11 56.52 0.40 0.44 16 28 H 0.15 -0.39 6.17 -52.48 -0.32 -0.71 16 29 H 0.15 0.14 8.06 -52.49 -0.42 -0.28 16 30 H 0.39 -1.76 7.60 -40.82 -0.31 -2.07 16 31 H 0.08 -0.12 7.84 -51.93 -0.41 -0.53 16 32 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 35 H 0.17 -0.62 6.68 -52.49 -0.35 -0.97 16 36 H 0.15 -0.22 8.06 -52.49 -0.42 -0.64 16 37 H 0.18 -0.19 8.06 -52.48 -0.42 -0.61 16 38 H 0.11 -0.50 7.90 -51.93 -0.41 -0.91 16 39 H 0.08 -0.34 6.97 -51.93 -0.36 -0.70 16 40 H 0.42 -1.67 8.19 -40.82 -0.33 -2.01 16 LS Contribution 339.30 15.07 5.11 5.11 Total: 0.00 -10.23 339.30 -9.41 -19.64 By element: Atomic # 1 Polarization: -9.16 SS G_CDS: -5.03 Total: -14.19 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -3.74 Total: -1.84 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.20 Total: 0.65 kcal Atomic # 8 Polarization: -1.84 SS G_CDS: -0.37 Total: -2.21 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.19 Total: -7.17 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -10.23 -9.41 -19.64 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.541 kcal (2) G-P(sol) polarization free energy of solvation -10.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.640 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds