Wall clock time and date at job start Sun Mar 7 2021 14:59:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47101 * 2 1 4 4 C 1.50703 * 109.47350 * 239.99653 * 2 1 3 5 5 C 1.34245 * 126.49602 * 105.35216 * 4 2 1 6 6 N 1.36836 * 109.93418 * 180.13684 * 5 4 2 7 7 C 1.46492 * 125.06088 * 179.81416 * 6 5 4 8 8 C 1.50699 * 109.47638 * 264.70076 * 7 6 5 9 9 O 1.21287 * 119.99705 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00510 * 180.02562 * 8 7 6 11 11 C 1.46493 * 120.00050 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.47287 * 179.97438 * 11 10 8 13 13 H 1.09003 * 112.84573 * 43.80420 * 12 11 10 14 14 C 1.53781 * 113.61703 * 174.99941 * 12 11 10 15 15 C 1.53777 * 87.08098 * 140.06592 * 14 12 11 16 16 H 1.08996 * 113.61281 * 219.93456 * 15 14 12 17 17 N 1.46502 * 113.61509 * 89.11286 * 15 14 12 18 18 C 1.34942 * 126.03991 * 275.02583 * 17 15 14 19 19 C 1.35316 * 107.74613 * 179.75096 * 18 17 15 20 20 C 1.39870 * 107.92161 * 0.39436 * 19 18 17 21 21 N 1.30836 * 108.20019 * 359.59732 * 20 19 18 22 22 C 1.53782 * 113.68924 * 272.53559 * 12 11 10 23 23 C 1.37687 * 109.87461 * 359.55829 * 6 5 4 24 24 C 1.39088 * 133.51510 * 180.28698 * 23 6 5 25 25 C 1.37785 * 119.77984 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.67066 * 0.02562 * 25 24 23 27 27 C 1.36668 * 120.52238 * 0.02562 * 26 25 24 28 28 C 1.39586 * 119.76439 * 359.94951 * 27 26 25 29 29 H 0.96698 * 114.00020 * 60.00541 * 1 2 3 30 30 H 1.08999 * 109.47572 * 120.00105 * 2 1 3 31 31 H 1.48497 * 109.99972 * 60.00052 * 3 2 1 32 32 H 1.48503 * 110.00091 * 181.32217 * 3 2 1 33 33 H 1.07997 * 125.03450 * 359.97438 * 5 4 2 34 34 H 1.09001 * 109.47311 * 144.69814 * 7 6 5 35 35 H 1.08999 * 109.47388 * 24.69901 * 7 6 5 36 36 H 0.97000 * 119.99927 * 359.97438 * 10 8 7 37 37 H 1.09001 * 109.47517 * 60.00226 * 11 10 8 38 38 H 1.09002 * 109.47411 * 299.99738 * 11 10 8 39 39 H 1.09000 * 113.61250 * 25.51603 * 14 12 11 40 40 H 1.09001 * 113.61442 * 254.61215 * 14 12 11 41 41 H 1.08002 * 126.12737 * 359.97438 * 18 17 15 42 42 H 1.07998 * 126.04386 * 180.27449 * 19 18 17 43 43 H 1.08002 * 125.90382 * 179.86983 * 20 19 18 44 44 H 1.09005 * 113.61089 * 105.45601 * 22 12 11 45 45 H 1.08998 * 113.61477 * 334.55095 * 22 12 11 46 46 H 1.08000 * 120.10731 * 359.94899 * 24 23 6 47 47 H 1.08002 * 119.66366 * 180.02562 * 25 24 23 48 48 H 1.08000 * 119.73896 * 179.97438 * 26 25 24 49 49 H 1.07996 * 120.11367 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.4669 -0.1381 -2.3202 6 7 2.8040 -1.0991 -3.2341 7 6 3.4095 -0.8406 -4.5427 8 6 2.3305 -0.7840 -5.5932 9 8 1.1699 -0.9444 -5.2797 10 7 2.6552 -0.5562 -6.8813 11 6 1.6062 -0.5007 -7.9023 12 6 2.2386 -0.2308 -9.2692 13 1 3.1358 -0.8243 -9.4450 14 6 1.2336 -0.2741 -10.4324 15 6 1.9819 0.9339 -11.0203 16 1 1.3239 1.6826 -11.4614 17 7 3.0935 0.5642 -11.9001 18 6 4.3509 0.2689 -11.5093 19 6 5.0693 -0.0237 -12.6180 20 6 4.2243 0.1058 -13.7251 21 7 3.0388 0.4548 -13.2956 22 6 2.4174 1.2641 -9.5829 23 6 2.4946 -2.3457 -2.7381 24 6 2.6302 -3.6363 -3.2386 25 6 2.2161 -4.7108 -2.4820 26 6 1.6636 -4.5194 -1.2233 27 6 1.5201 -3.2599 -0.7125 28 6 1.9334 -2.1570 -1.4617 29 1 -0.3933 0.4416 -0.7651 30 1 1.7924 -0.5138 0.8899 31 1 1.5614 2.4678 1.2085 32 1 3.5346 1.7703 -0.0322 33 1 2.6082 0.9239 -2.4567 34 1 4.1096 -1.6406 -4.7836 35 1 3.9405 0.1109 -4.5158 36 1 3.5835 -0.4283 -7.1322 37 1 0.9068 0.2999 -7.6616 38 1 1.0745 -1.4518 -7.9291 39 1 0.2097 -0.0501 -10.1332 40 1 1.3102 -1.1742 -11.0423 41 1 4.7172 0.2633 -10.4933 42 1 6.1116 -0.3053 -12.6438 43 1 4.5013 -0.0587 -14.7559 44 1 3.4498 1.6056 -9.5070 45 1 1.7171 1.9085 -9.0516 46 1 3.0582 -3.7956 -4.2173 47 1 2.3226 -5.7121 -2.8724 48 1 1.3437 -5.3724 -0.6433 49 1 1.0897 -3.1186 0.2678 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:59:32 Heat of formation + Delta-G solvation = 119.807843 kcal Electronic energy + Delta-G solvation = -31958.050729 eV Core-core repulsion = 27662.569883 eV Total energy + Delta-G solvation = -4295.480846 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.56674 -42.46262 -40.85602 -39.84558 -38.00768 -37.53947 -35.84625 -34.09171 -32.57375 -31.46765 -31.07465 -30.14768 -29.71589 -28.22286 -27.19076 -25.76917 -24.63083 -23.60985 -22.61122 -22.47123 -21.88681 -21.64453 -20.61992 -20.46119 -18.79000 -18.45153 -18.07395 -17.75743 -17.42177 -16.89300 -16.79142 -16.42032 -16.28601 -16.07150 -15.76966 -15.64159 -15.36929 -15.27889 -15.01109 -14.74594 -14.64392 -14.54099 -14.33582 -14.07368 -13.96994 -13.86708 -13.60886 -13.51110 -13.38788 -13.07239 -12.61900 -12.47566 -12.38688 -12.12932 -12.03602 -11.97729 -11.86500 -11.69530 -11.60587 -11.14341 -10.44829 -10.40082 -10.34845 -10.22597 -9.58564 -9.04688 -8.55081 -5.03383 0.25543 0.77090 0.87406 1.33648 1.36563 1.38104 1.38189 1.65610 1.70825 1.89490 2.01779 2.04961 2.90568 3.01917 3.09781 3.26861 3.37541 3.43976 3.46284 3.63674 3.71929 3.74115 3.77233 3.82702 3.83981 3.92760 4.06240 4.13573 4.23455 4.29370 4.31104 4.34851 4.40595 4.50995 4.55271 4.56058 4.64050 4.69283 4.70960 4.77142 4.81040 4.87687 4.88217 4.96569 5.04801 5.12837 5.23294 5.62485 5.67544 5.78526 5.83984 5.87865 6.01740 6.08201 6.27194 6.33912 6.73109 6.76759 6.93239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.511 6.511 10 N -0.729 5.729 11 C 0.132 3.868 12 C -0.128 4.128 13 H 0.100 0.900 14 C -0.136 4.136 15 C 0.134 3.866 16 H 0.113 0.887 17 N -0.356 5.356 18 C 0.051 3.949 19 C -0.272 4.272 20 C 0.045 3.955 21 N -0.293 5.293 22 C -0.138 4.138 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.066 4.066 28 C -0.087 4.087 29 H 0.377 0.623 30 H 0.110 0.890 31 H -0.254 1.254 32 H -0.256 1.256 33 H 0.171 0.829 34 H 0.117 0.883 35 H 0.123 0.877 36 H 0.401 0.599 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.107 0.893 40 H 0.082 0.918 41 H 0.170 0.830 42 H 0.148 0.852 43 H 0.185 0.815 44 H 0.082 0.918 45 H 0.110 0.890 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.715 2.590 -3.262 6.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.057 4.057 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.274 3.726 9 O -0.385 6.385 10 N -0.382 5.382 11 C 0.008 3.992 12 C -0.146 4.146 13 H 0.118 0.882 14 C -0.175 4.175 15 C 0.031 3.969 16 H 0.131 0.869 17 N -0.139 5.139 18 C -0.095 4.095 19 C -0.302 4.302 20 C -0.141 4.141 21 N -0.113 5.113 22 C -0.176 4.176 23 C 0.004 3.996 24 C -0.149 4.149 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.084 4.084 28 C -0.091 4.091 29 H 0.224 0.776 30 H 0.127 0.873 31 H -0.179 1.179 32 H -0.180 1.180 33 H 0.188 0.812 34 H 0.135 0.865 35 H 0.141 0.859 36 H 0.236 0.764 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.125 0.875 40 H 0.100 0.900 41 H 0.187 0.813 42 H 0.166 0.834 43 H 0.201 0.799 44 H 0.100 0.900 45 H 0.129 0.871 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.245 3.177 -2.578 5.222 hybrid contribution 1.529 -0.812 -0.016 1.731 sum 4.774 2.365 -2.594 5.925 Atomic orbital electron populations 1.86491 1.17419 1.81832 1.48953 1.24332 0.84798 1.08748 0.96221 0.95265 0.80617 0.77851 0.87860 1.20656 1.09536 0.92416 0.97873 1.21503 1.01281 0.93763 0.89116 1.43182 1.53959 1.04651 1.13191 1.21576 0.94548 1.05963 0.81381 1.21008 0.90821 0.77285 0.83483 1.90828 1.19853 1.47025 1.80797 1.45932 1.11096 1.74131 1.07069 1.21368 0.89973 1.02859 0.84973 1.22959 1.00336 0.97040 0.94283 0.88184 1.23382 0.99202 0.98946 0.95966 1.22033 0.87357 0.98487 0.89035 0.86905 1.48393 1.07819 1.52814 1.04832 1.22448 0.85582 1.01035 1.00448 1.21570 1.01971 1.15156 0.91487 1.23981 0.90595 0.99019 1.00487 1.77433 1.22330 1.23405 0.88148 1.23525 1.03760 0.96785 0.93550 1.18161 1.01409 0.85839 0.94174 1.19950 1.05350 0.89286 1.00291 1.20827 0.98337 0.97961 0.94451 1.20676 1.02388 0.96952 0.96444 1.20312 0.97870 0.90954 0.99272 1.18943 1.03143 0.92823 0.94171 0.77552 0.87253 1.17885 1.18045 0.81217 0.86515 0.85915 0.76437 0.90685 0.90876 0.87490 0.89967 0.81270 0.83397 0.79854 0.89969 0.87135 0.86773 0.85726 0.85920 0.85965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.17 12.88 -35.23 -0.45 -1.63 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.51 30.75 -169.99 -5.23 -5.74 16 4 C -0.20 -0.43 5.58 -102.71 -0.57 -1.00 16 5 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.32 2.27 -115.71 -0.26 -0.58 16 7 C 0.09 -0.30 6.48 -5.20 -0.03 -0.34 16 8 C 0.49 -0.60 7.90 -10.99 -0.09 -0.68 16 9 O -0.51 -2.05 16.42 5.55 0.09 -1.96 16 10 N -0.73 3.13 5.56 -60.29 -0.33 2.79 16 11 C 0.13 -0.46 5.51 -4.04 -0.02 -0.48 16 12 C -0.13 0.62 3.33 -89.80 -0.30 0.32 16 13 H 0.10 -0.50 6.97 -51.93 -0.36 -0.86 16 14 C -0.14 0.45 7.44 -25.92 -0.19 0.26 16 15 C 0.13 -0.32 5.18 -67.12 -0.35 -0.67 16 16 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 17 N -0.36 -0.07 3.79 -54.07 -0.21 -0.28 16 18 C 0.05 -0.06 9.62 -17.23 -0.17 -0.23 16 19 C -0.27 0.07 10.80 -40.01 -0.43 -0.36 16 20 C 0.05 0.05 12.03 -17.37 -0.21 -0.16 16 21 N -0.29 -0.86 12.58 30.62 0.39 -0.48 16 22 C -0.14 0.71 6.88 -25.92 -0.18 0.53 16 23 C 0.11 0.35 6.80 -83.99 -0.57 -0.23 16 24 C -0.13 -0.31 10.00 -39.43 -0.39 -0.70 16 25 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 26 C -0.15 -0.39 9.97 -39.95 -0.40 -0.79 16 27 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 28 C -0.09 -0.35 6.35 -105.14 -0.67 -1.02 16 29 H 0.38 -0.51 8.70 45.56 0.40 -0.11 16 30 H 0.11 0.20 7.96 -51.93 -0.41 -0.21 16 31 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 32 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 33 H 0.17 -0.58 6.34 -52.49 -0.33 -0.91 16 34 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 35 H 0.12 -0.83 8.12 -51.93 -0.42 -1.25 16 36 H 0.40 -2.95 8.47 -40.82 -0.35 -3.30 16 37 H 0.07 -0.21 7.85 -51.93 -0.41 -0.62 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.11 -0.45 8.10 -51.93 -0.42 -0.87 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.17 -0.81 6.66 -52.49 -0.35 -1.16 16 42 H 0.15 -0.32 8.06 -52.49 -0.42 -0.74 16 43 H 0.18 -0.27 8.06 -52.49 -0.42 -0.69 16 44 H 0.08 -0.45 6.98 -51.93 -0.36 -0.82 16 45 H 0.11 -0.64 7.90 -51.93 -0.41 -1.05 16 46 H 0.11 0.05 8.06 -52.49 -0.42 -0.38 16 47 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.35 8.06 -52.49 -0.42 -0.07 16 LS Contribution 410.30 15.07 6.18 6.18 Total: 0.00 -13.22 410.30 -12.10 -25.32 By element: Atomic # 1 Polarization: -9.89 SS G_CDS: -6.86 Total: -16.75 kcal Atomic # 6 Polarization: -1.46 SS G_CDS: -5.42 Total: -6.88 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -0.42 Total: 1.45 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.36 Total: -3.59 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.23 Total: -5.74 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -13.22 -12.10 -25.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.125 kcal (2) G-P(sol) polarization free energy of solvation -13.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.317 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.808 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds