Wall clock time and date at job start Sun Mar 7 2021 14:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47101 * 2 1 4 4 C 1.50703 * 109.47350 * 239.99653 * 2 1 3 5 5 C 1.34245 * 126.49602 * 105.35216 * 4 2 1 6 6 N 1.36836 * 109.93418 * 180.13684 * 5 4 2 7 7 C 1.46492 * 125.06088 * 179.81416 * 6 5 4 8 8 C 1.50699 * 109.47638 * 264.70076 * 7 6 5 9 9 O 1.21287 * 119.99705 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00510 * 180.02562 * 8 7 6 11 11 C 1.46493 * 120.00050 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.47287 * 179.97438 * 11 10 8 13 13 H 1.09003 * 112.84573 * 43.80420 * 12 11 10 14 14 C 1.53781 * 113.61703 * 174.99941 * 12 11 10 15 15 C 1.53777 * 87.08098 * 140.06592 * 14 12 11 16 16 H 1.08996 * 113.61281 * 219.93456 * 15 14 12 17 17 N 1.46502 * 113.61509 * 89.11286 * 15 14 12 18 18 C 1.34942 * 126.03991 * 275.02583 * 17 15 14 19 19 C 1.35316 * 107.74613 * 179.75096 * 18 17 15 20 20 C 1.39870 * 107.92161 * 0.39436 * 19 18 17 21 21 N 1.30836 * 108.20019 * 359.59732 * 20 19 18 22 22 C 1.53782 * 113.68924 * 272.53559 * 12 11 10 23 23 C 1.37687 * 109.87461 * 359.55829 * 6 5 4 24 24 C 1.39088 * 133.51510 * 180.28698 * 23 6 5 25 25 C 1.37785 * 119.77984 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.67066 * 0.02562 * 25 24 23 27 27 C 1.36668 * 120.52238 * 0.02562 * 26 25 24 28 28 C 1.39586 * 119.76439 * 359.94951 * 27 26 25 29 29 H 0.96698 * 114.00020 * 60.00541 * 1 2 3 30 30 H 1.08999 * 109.47572 * 120.00105 * 2 1 3 31 31 H 1.48497 * 109.99972 * 60.00052 * 3 2 1 32 32 H 1.48503 * 110.00091 * 181.32217 * 3 2 1 33 33 H 1.07997 * 125.03450 * 359.97438 * 5 4 2 34 34 H 1.09001 * 109.47311 * 144.69814 * 7 6 5 35 35 H 1.08999 * 109.47388 * 24.69901 * 7 6 5 36 36 H 0.97000 * 119.99927 * 359.97438 * 10 8 7 37 37 H 1.09001 * 109.47517 * 60.00226 * 11 10 8 38 38 H 1.09002 * 109.47411 * 299.99738 * 11 10 8 39 39 H 1.09000 * 113.61250 * 25.51603 * 14 12 11 40 40 H 1.09001 * 113.61442 * 254.61215 * 14 12 11 41 41 H 1.08002 * 126.12737 * 359.97438 * 18 17 15 42 42 H 1.07998 * 126.04386 * 180.27449 * 19 18 17 43 43 H 1.08002 * 125.90382 * 179.86983 * 20 19 18 44 44 H 1.09005 * 113.61089 * 105.45601 * 22 12 11 45 45 H 1.08998 * 113.61477 * 334.55095 * 22 12 11 46 46 H 1.08000 * 120.10731 * 359.94899 * 24 23 6 47 47 H 1.08002 * 119.66366 * 180.02562 * 25 24 23 48 48 H 1.08000 * 119.73896 * 179.97438 * 26 25 24 49 49 H 1.07996 * 120.11367 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.4669 -0.1381 -2.3202 6 7 2.8040 -1.0991 -3.2341 7 6 3.4095 -0.8406 -4.5427 8 6 2.3305 -0.7840 -5.5932 9 8 1.1699 -0.9444 -5.2797 10 7 2.6552 -0.5562 -6.8813 11 6 1.6062 -0.5007 -7.9023 12 6 2.2386 -0.2308 -9.2692 13 1 3.1358 -0.8243 -9.4450 14 6 1.2336 -0.2741 -10.4324 15 6 1.9819 0.9339 -11.0203 16 1 1.3239 1.6826 -11.4614 17 7 3.0935 0.5642 -11.9001 18 6 4.3509 0.2689 -11.5093 19 6 5.0693 -0.0237 -12.6180 20 6 4.2243 0.1058 -13.7251 21 7 3.0388 0.4548 -13.2956 22 6 2.4174 1.2641 -9.5829 23 6 2.4946 -2.3457 -2.7381 24 6 2.6302 -3.6363 -3.2386 25 6 2.2161 -4.7108 -2.4820 26 6 1.6636 -4.5194 -1.2233 27 6 1.5201 -3.2599 -0.7125 28 6 1.9334 -2.1570 -1.4617 29 1 -0.3933 0.4416 -0.7651 30 1 1.7924 -0.5138 0.8899 31 1 1.5614 2.4678 1.2085 32 1 3.5346 1.7703 -0.0322 33 1 2.6082 0.9239 -2.4567 34 1 4.1096 -1.6406 -4.7836 35 1 3.9405 0.1109 -4.5158 36 1 3.5835 -0.4283 -7.1322 37 1 0.9068 0.2999 -7.6616 38 1 1.0745 -1.4518 -7.9291 39 1 0.2097 -0.0501 -10.1332 40 1 1.3102 -1.1742 -11.0423 41 1 4.7172 0.2633 -10.4933 42 1 6.1116 -0.3053 -12.6438 43 1 4.5013 -0.0587 -14.7559 44 1 3.4498 1.6056 -9.5070 45 1 1.7171 1.9085 -9.0516 46 1 3.0582 -3.7956 -4.2173 47 1 2.3226 -5.7121 -2.8724 48 1 1.3437 -5.3724 -0.6433 49 1 1.0897 -3.1186 0.2678 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:59:31 Heat of formation + Delta-G solvation = 117.648217 kcal Electronic energy + Delta-G solvation = -31958.144378 eV Core-core repulsion = 27662.569883 eV Total energy + Delta-G solvation = -4295.574494 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.52564 -42.38348 -40.72588 -39.66408 -38.09831 -37.60938 -35.69395 -34.07207 -32.47033 -31.49871 -31.00079 -30.23636 -29.63724 -28.07702 -26.87046 -25.75337 -24.47721 -23.68779 -22.66548 -22.31253 -21.76431 -21.52395 -20.65428 -20.27395 -18.69128 -18.35999 -17.86034 -17.75025 -17.35374 -16.80517 -16.62578 -16.44148 -16.21326 -16.01465 -15.73274 -15.53109 -15.33137 -15.24681 -14.91610 -14.74531 -14.67837 -14.46846 -14.27032 -14.04605 -13.84540 -13.68298 -13.56948 -13.25084 -13.16621 -12.88558 -12.72250 -12.56825 -12.23146 -12.12028 -12.08345 -11.80920 -11.76917 -11.58701 -11.51130 -11.07693 -10.54800 -10.36221 -10.29322 -10.13988 -9.50293 -9.15704 -8.61985 -4.98923 0.14044 0.62863 0.96607 1.37943 1.43098 1.52282 1.54869 1.70216 1.72496 1.94272 2.01743 2.24700 2.93865 3.19868 3.32877 3.55518 3.60163 3.68091 3.70524 3.71926 3.80808 3.90216 3.93720 4.05822 4.06314 4.18927 4.19681 4.21674 4.30397 4.38822 4.47871 4.48821 4.55876 4.66626 4.71377 4.72122 4.73692 4.78045 4.78952 4.87895 4.89049 4.93046 4.99540 5.12978 5.14175 5.21689 5.40376 5.49788 5.65259 5.72866 5.74604 5.75351 6.20029 6.20791 6.24885 6.52185 6.77780 6.83419 7.19316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.048 4.048 3 Si 0.797 3.203 4 C -0.227 4.227 5 C 0.082 3.918 6 N -0.466 5.466 7 C 0.086 3.914 8 C 0.491 3.509 9 O -0.572 6.572 10 N -0.709 5.709 11 C 0.136 3.864 12 C -0.109 4.109 13 H 0.109 0.891 14 C -0.138 4.138 15 C 0.118 3.882 16 H 0.104 0.896 17 N -0.360 5.360 18 C 0.057 3.943 19 C -0.290 4.290 20 C 0.030 3.970 21 N -0.345 5.345 22 C -0.120 4.120 23 C 0.090 3.910 24 C -0.133 4.133 25 C -0.110 4.110 26 C -0.155 4.155 27 C -0.092 4.092 28 C -0.118 4.118 29 H 0.391 0.609 30 H 0.090 0.910 31 H -0.303 1.303 32 H -0.273 1.273 33 H 0.211 0.789 34 H 0.140 0.860 35 H 0.168 0.832 36 H 0.421 0.579 37 H 0.070 0.930 38 H 0.051 0.949 39 H 0.113 0.887 40 H 0.060 0.940 41 H 0.209 0.791 42 H 0.165 0.835 43 H 0.196 0.804 44 H 0.098 0.902 45 H 0.122 0.878 46 H 0.134 0.866 47 H 0.145 0.855 48 H 0.134 0.866 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.933 3.948 -3.851 8.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.157 4.157 3 Si 0.701 3.299 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.038 4.038 8 C 0.277 3.723 9 O -0.450 6.450 10 N -0.363 5.363 11 C 0.012 3.988 12 C -0.128 4.128 13 H 0.127 0.873 14 C -0.177 4.177 15 C 0.016 3.984 16 H 0.122 0.878 17 N -0.143 5.143 18 C -0.089 4.089 19 C -0.320 4.320 20 C -0.155 4.155 21 N -0.167 5.167 22 C -0.158 4.158 23 C -0.015 4.015 24 C -0.153 4.153 25 C -0.129 4.129 26 C -0.174 4.174 27 C -0.110 4.110 28 C -0.122 4.122 29 H 0.240 0.760 30 H 0.108 0.892 31 H -0.231 1.231 32 H -0.200 1.200 33 H 0.227 0.773 34 H 0.158 0.842 35 H 0.185 0.815 36 H 0.259 0.741 37 H 0.088 0.912 38 H 0.070 0.930 39 H 0.131 0.869 40 H 0.079 0.921 41 H 0.225 0.775 42 H 0.182 0.818 43 H 0.213 0.787 44 H 0.116 0.884 45 H 0.140 0.860 46 H 0.152 0.848 47 H 0.162 0.838 48 H 0.152 0.848 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 5.496 4.514 -3.239 7.815 hybrid contribution 0.799 -1.273 0.147 1.510 sum 6.295 3.241 -3.092 7.726 Atomic orbital electron populations 1.86442 1.18352 1.82444 1.49997 1.24717 0.84372 1.11109 0.95496 0.93990 0.77435 0.73364 0.85113 1.20804 1.11574 0.91846 0.99198 1.22093 0.98924 0.95316 0.88031 1.43447 1.53264 1.03688 1.14454 1.22009 0.93854 1.09227 0.78692 1.21380 0.90355 0.76162 0.84440 1.90820 1.22337 1.50036 1.81795 1.45762 1.11994 1.72526 1.05999 1.21244 0.90207 1.01584 0.85755 1.22807 0.99791 0.97586 0.92573 0.87277 1.23390 1.00156 0.97730 0.96447 1.22287 0.87334 0.98716 0.90097 0.87785 1.48594 1.08903 1.52575 1.04183 1.23071 0.84693 0.99156 1.01933 1.21898 1.02849 1.15818 0.91395 1.24365 0.90629 0.98726 1.01754 1.77349 1.23666 1.25497 0.90176 1.23490 1.04921 0.96442 0.90906 1.18378 1.01773 0.87146 0.94191 1.20249 1.04923 0.89156 1.00999 1.21121 0.98371 0.99096 0.94301 1.20904 1.02395 0.96973 0.97081 1.20439 0.99230 0.91889 0.99489 1.19384 1.03724 0.93988 0.95140 0.76014 0.89216 1.23088 1.19952 0.77293 0.84184 0.81475 0.74149 0.91175 0.93033 0.86861 0.92130 0.77460 0.81792 0.78725 0.88374 0.86020 0.84827 0.83774 0.84782 0.86725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.40 12.88 -148.98 -1.92 -5.32 16 2 C -0.05 -0.18 3.06 71.24 0.22 0.04 16 3 Si 0.80 -1.71 30.75 68.60 2.11 0.40 16 4 C -0.23 -1.13 5.58 -18.62 -0.10 -1.24 16 5 C 0.08 -0.08 9.89 83.00 0.82 0.74 16 6 N -0.47 0.07 2.27 -520.01 -1.18 -1.11 16 7 C 0.09 -0.86 6.48 85.63 0.56 -0.30 16 8 C 0.49 -2.20 7.90 87.66 0.69 -1.51 16 9 O -0.57 -4.41 16.42 -3.05 -0.05 -4.46 16 10 N -0.71 7.97 5.56 -463.06 -2.57 5.40 16 11 C 0.14 -1.13 5.51 86.38 0.48 -0.65 16 12 C -0.11 1.25 3.33 -10.26 -0.03 1.22 16 13 H 0.11 -1.40 6.97 -2.39 -0.02 -1.42 16 14 C -0.14 0.90 7.44 31.12 0.23 1.14 16 15 C 0.12 -0.62 5.18 45.52 0.24 -0.38 16 16 H 0.10 -0.40 8.14 -2.39 -0.02 -0.42 16 17 N -0.36 -0.04 3.79 -324.99 -1.23 -1.28 16 18 C 0.06 -0.24 9.62 83.54 0.80 0.56 16 19 C -0.29 0.38 10.80 21.99 0.24 0.61 16 20 C 0.03 0.09 12.03 85.24 1.03 1.11 16 21 N -0.35 -2.41 12.58 -57.02 -0.72 -3.13 16 22 C -0.12 1.51 6.88 31.12 0.21 1.72 16 23 C 0.09 0.59 6.80 39.03 0.27 0.86 16 24 C -0.13 -0.65 10.00 22.37 0.22 -0.42 16 25 C -0.11 -0.56 10.01 22.29 0.22 -0.34 16 26 C -0.15 -1.12 9.97 22.03 0.22 -0.90 16 27 C -0.09 -0.94 10.05 22.23 0.22 -0.72 16 28 C -0.12 -1.17 6.35 -20.20 -0.13 -1.29 16 29 H 0.39 -0.64 8.70 -74.06 -0.64 -1.28 16 30 H 0.09 0.58 7.96 -2.39 -0.02 0.56 16 31 H -0.30 -1.76 7.11 99.48 0.71 -1.06 16 32 H -0.27 -0.22 7.11 99.48 0.71 0.49 16 33 H 0.21 -2.15 6.34 -2.91 -0.02 -2.17 16 34 H 0.14 -2.00 8.14 -2.39 -0.02 -2.02 16 35 H 0.17 -3.14 8.12 -2.39 -0.02 -3.16 16 36 H 0.42 -7.91 8.47 -92.71 -0.79 -8.70 16 37 H 0.07 -0.46 7.85 -2.39 -0.02 -0.48 16 38 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 39 H 0.11 -0.92 8.10 -2.39 -0.02 -0.94 16 40 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 41 H 0.21 -2.77 6.66 -2.91 -0.02 -2.79 16 42 H 0.16 -0.92 8.06 -2.91 -0.02 -0.94 16 43 H 0.20 -0.36 8.06 -2.91 -0.02 -0.38 16 44 H 0.10 -1.47 6.98 -2.38 -0.02 -1.49 16 45 H 0.12 -1.73 7.90 -2.39 -0.02 -1.75 16 46 H 0.13 -0.04 8.06 -2.91 -0.02 -0.06 16 47 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 48 H 0.13 0.44 8.06 -2.91 -0.02 0.42 16 49 H 0.11 1.12 8.06 -2.91 -0.02 1.09 16 Total: 0.00 -36.48 410.30 0.44 -36.04 By element: Atomic # 1 Polarization: -26.41 SS G_CDS: -0.40 Total: -26.81 kcal Atomic # 6 Polarization: -6.14 SS G_CDS: 6.40 Total: 0.26 kcal Atomic # 7 Polarization: 5.59 SS G_CDS: -5.70 Total: -0.11 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -1.97 Total: -9.78 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: 2.11 Total: 0.40 kcal Total: -36.48 0.44 -36.04 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 153.690 kcal (2) G-P(sol) polarization free energy of solvation -36.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.042 kcal (6) G-S(sol) free energy of system = (1) + (5) 117.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds