Wall clock time and date at job start Sun Mar 7 2021 12:27:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42907 * 109.47154 * 2 1 4 4 C 1.35898 * 116.99860 * 84.95126 * 3 2 1 5 5 C 1.38730 * 120.05434 * 174.28146 * 4 3 2 6 6 C 1.38146 * 119.94593 * 179.70301 * 5 4 3 7 7 C 1.38264 * 120.05115 * 0.58750 * 6 5 4 8 8 C 1.50701 * 119.94386 * 179.70628 * 7 6 5 9 9 O 1.42905 * 109.46799 * 244.98131 * 8 7 6 10 10 Si 1.86295 * 109.47007 * 4.97595 * 8 7 6 11 11 C 1.38271 * 120.11144 * 359.68500 * 7 6 5 12 12 C 1.38135 * 120.05788 * 0.02562 * 11 7 6 13 13 C 1.50705 * 109.47003 * 240.00376 * 2 1 3 14 14 O 1.21282 * 120.00128 * 119.99973 * 13 2 1 15 15 N 1.34777 * 119.99537 * 299.99374 * 13 2 1 16 16 C 1.46504 * 119.99530 * 179.97438 * 15 13 2 17 17 H 1.09002 * 112.90842 * 23.75530 * 16 15 13 18 18 C 1.53781 * 113.61139 * 154.99980 * 16 15 13 19 19 C 1.53788 * 87.08117 * 89.11815 * 18 16 15 20 20 H 1.08999 * 113.61099 * 270.88936 * 19 18 16 21 21 C 1.50692 * 113.61603 * 139.97883 * 19 18 16 22 22 N 1.30501 * 125.65008 * 95.02926 * 21 19 18 23 23 C 1.34130 * 109.25631 * 180.02562 * 22 21 19 24 24 C 1.34666 * 108.02294 * 0.02562 * 23 22 21 25 25 N 1.35045 * 125.65305 * 274.72361 * 21 19 18 26 26 C 1.53775 * 113.61625 * 252.49862 * 16 15 13 27 27 H 1.09006 * 109.46994 * 299.99551 * 1 2 3 28 28 H 1.08996 * 109.47526 * 59.99831 * 1 2 3 29 29 H 1.08999 * 109.46618 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47526 * 120.00169 * 2 1 3 31 31 H 1.08005 * 120.02931 * 359.97438 * 5 4 3 32 32 H 1.07995 * 119.97349 * 180.31930 * 6 5 4 33 33 H 1.08995 * 109.47053 * 124.97970 * 8 7 6 34 34 H 0.96698 * 113.99820 * 180.02562 * 9 8 7 35 35 H 1.48508 * 109.99980 * 178.68117 * 10 8 7 36 36 H 1.48502 * 110.00547 * 300.00300 * 10 8 7 37 37 H 1.08003 * 119.97011 * 179.97438 * 11 7 6 38 38 H 1.08003 * 120.03152 * 179.97438 * 12 11 7 39 39 H 0.97000 * 120.00417 * 0.02562 * 15 13 2 40 40 H 1.08998 * 113.61843 * 334.57319 * 18 16 15 41 41 H 1.08993 * 113.69252 * 203.67699 * 18 16 15 42 42 H 1.08001 * 125.98593 * 179.97438 * 23 22 21 43 43 H 1.07993 * 126.59254 * 180.02562 * 24 23 22 44 44 H 0.97005 * 126.39370 * 359.97438 * 25 21 19 45 45 H 1.09003 * 113.61545 * 156.34228 * 26 16 15 46 46 H 1.08997 * 113.61618 * 25.43500 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1115 1.9645 1.2062 5 6 2.6775 3.2281 1.2931 6 6 2.7778 3.8560 2.5195 7 6 2.3256 3.2210 3.6615 8 6 2.4421 3.9055 4.9990 9 8 3.3414 3.1717 5.8327 10 14 3.0909 5.6349 4.7571 11 6 1.7662 1.9592 3.5782 12 6 1.6583 1.3297 2.3534 13 6 2.0323 -0.7104 -1.2306 14 8 2.7296 -0.1209 -2.0289 15 7 1.7067 -2.0007 -1.4438 16 6 2.1946 -2.6911 -2.6403 17 1 3.0992 -2.2419 -3.0502 18 6 2.2844 -4.2176 -2.4771 19 6 0.8293 -4.2772 -2.9711 20 1 0.0931 -4.1970 -2.1713 21 6 0.5560 -5.4262 -3.9070 22 7 0.0749 -6.5895 -3.5630 23 6 -0.0354 -7.3626 -4.6535 24 6 0.3943 -6.6516 -5.7134 25 7 0.7631 -5.4208 -5.2414 26 6 1.1026 -2.9467 -3.6923 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3632 -1.0277 0.0005 30 1 1.8934 -0.5138 0.8899 31 1 3.0356 3.7224 0.4020 32 1 3.2136 4.8418 2.5870 33 1 1.4611 3.9482 5.4719 34 1 3.4645 3.5554 6.7117 35 1 3.1804 6.3315 6.0656 36 1 4.4282 5.5904 4.1129 37 1 1.4141 1.4652 4.4718 38 1 1.2216 0.3439 2.2890 39 1 1.1488 -2.4721 -0.8054 40 1 2.4080 -4.5397 -1.4431 41 1 2.9954 -4.6895 -3.1552 42 1 -0.4034 -8.3777 -4.6772 43 1 0.4344 -6.9861 -6.7395 44 1 1.1111 -4.6834 -5.7669 45 1 1.4906 -3.0700 -4.7035 46 1 0.2720 -2.2428 -3.6395 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:27:01 Heat of formation + Delta-G solvation = 19.436162 kcal Electronic energy + Delta-G solvation = -28793.466579 eV Core-core repulsion = 24652.366909 eV Total energy + Delta-G solvation = -4141.099670 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.09879 -41.85065 -40.94896 -39.60250 -38.74563 -37.33822 -34.90886 -33.45604 -33.02617 -32.08360 -31.49049 -30.46253 -26.83294 -26.82470 -26.38964 -25.21428 -24.12588 -22.71110 -22.34329 -21.77881 -21.49161 -20.53245 -19.48569 -19.04330 -18.58338 -18.39037 -17.34584 -16.86015 -16.81712 -16.70645 -16.20343 -16.02098 -15.78649 -15.68844 -15.40692 -15.27781 -14.97410 -14.56601 -14.48998 -14.38801 -14.33992 -13.90670 -13.90605 -13.80394 -13.53127 -13.39677 -13.23803 -12.89410 -12.52377 -12.40282 -12.08142 -11.95479 -11.89573 -11.69193 -11.53045 -11.04195 -11.00984 -10.96420 -10.46435 -10.24128 -10.03655 -9.34748 -9.21532 -4.92613 0.24207 0.33317 1.09603 1.31490 1.35441 1.46338 1.59206 1.94834 2.12384 2.21019 2.46073 2.61692 3.27790 3.36621 3.40418 3.43648 3.59278 3.67084 3.76547 3.82050 3.83964 3.89440 3.93939 4.08249 4.24268 4.24965 4.33447 4.49553 4.52709 4.54189 4.59768 4.60288 4.64544 4.66798 4.69902 4.77604 4.86988 4.95116 4.99212 5.02288 5.12045 5.14741 5.19059 5.28731 5.44152 5.50154 5.67241 5.79377 6.24576 6.41767 6.48534 6.61024 7.05499 7.13283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.063 3.937 3 O -0.310 6.310 4 C 0.121 3.879 5 C -0.159 4.159 6 C -0.081 4.081 7 C -0.124 4.124 8 C -0.076 4.076 9 O -0.559 6.559 10 Si 0.754 3.246 11 C -0.057 4.057 12 C -0.207 4.207 13 C 0.521 3.479 14 O -0.565 6.565 15 N -0.691 5.691 16 C 0.122 3.878 17 H 0.093 0.907 18 C -0.122 4.122 19 C -0.021 4.021 20 H 0.127 0.873 21 C 0.209 3.791 22 N -0.529 5.529 23 C -0.063 4.063 24 C -0.046 4.046 25 N -0.558 5.558 26 C -0.141 4.141 27 H 0.086 0.914 28 H 0.063 0.937 29 H 0.110 0.890 30 H 0.125 0.875 31 H 0.136 0.864 32 H 0.143 0.857 33 H 0.099 0.901 34 H 0.394 0.606 35 H -0.285 1.285 36 H -0.303 1.303 37 H 0.142 0.858 38 H 0.157 0.843 39 H 0.420 0.580 40 H 0.093 0.907 41 H 0.097 0.903 42 H 0.177 0.823 43 H 0.207 0.793 44 H 0.431 0.569 45 H 0.098 0.902 46 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.594 -0.652 0.481 4.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.003 3.997 3 O -0.224 6.224 4 C 0.076 3.924 5 C -0.178 4.178 6 C -0.098 4.098 7 C -0.124 4.124 8 C -0.185 4.185 9 O -0.369 6.369 10 Si 0.660 3.340 11 C -0.075 4.075 12 C -0.225 4.225 13 C 0.308 3.692 14 O -0.443 6.443 15 N -0.345 5.345 16 C 0.016 3.984 17 H 0.111 0.889 18 C -0.161 4.161 19 C -0.041 4.041 20 H 0.145 0.855 21 C -0.056 4.056 22 N -0.250 5.250 23 C -0.210 4.210 24 C -0.180 4.180 25 N -0.163 5.163 26 C -0.180 4.180 27 H 0.105 0.895 28 H 0.082 0.918 29 H 0.128 0.872 30 H 0.142 0.858 31 H 0.154 0.846 32 H 0.160 0.840 33 H 0.116 0.884 34 H 0.245 0.755 35 H -0.212 1.212 36 H -0.231 1.231 37 H 0.160 0.840 38 H 0.175 0.825 39 H 0.259 0.741 40 H 0.112 0.888 41 H 0.115 0.885 42 H 0.194 0.806 43 H 0.224 0.776 44 H 0.272 0.728 45 H 0.117 0.883 46 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.646 -0.251 0.174 3.659 hybrid contribution 0.654 -0.450 0.106 0.801 sum -2.992 -0.701 0.280 3.086 Atomic orbital electron populations 1.22385 0.90227 1.05784 1.04599 1.22430 0.97356 0.82190 0.97699 1.86179 1.81512 1.26930 1.27749 1.19219 0.95795 0.93099 0.84332 1.20552 1.03915 0.94269 0.99053 1.20955 0.97674 0.99813 0.91368 1.19410 1.02736 0.96688 0.93574 1.24848 0.97608 1.05361 0.90676 1.86549 1.66814 1.53500 1.30016 0.94236 0.82568 0.75623 0.81570 1.21020 0.95548 0.93410 0.97542 1.21534 1.06579 1.02618 0.91804 1.20494 0.79478 0.82407 0.86869 1.90755 1.38778 1.66801 1.47954 1.45385 1.53373 1.10523 1.25212 1.21755 0.97838 0.92803 0.85960 0.88891 1.23332 0.95328 0.93501 1.03912 1.21145 0.98852 0.88101 0.96014 0.85538 1.23312 1.02642 0.96287 0.83337 1.70177 1.19937 1.03135 1.31705 1.22739 1.07757 1.01725 0.88773 1.23274 1.06757 0.85969 1.01985 1.43290 1.50025 1.14404 1.08596 1.23498 0.99669 0.95781 0.99045 0.89533 0.91812 0.87187 0.85815 0.84607 0.83983 0.88366 0.75545 1.21227 1.23086 0.84026 0.82540 0.74116 0.88842 0.88480 0.80598 0.77596 0.72835 0.88335 0.89735 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.19 9.07 71.98 0.65 1.85 16 2 C 0.06 -0.09 2.64 29.85 0.08 -0.01 16 3 O -0.31 -2.03 9.33 -73.37 -0.68 -2.71 16 4 C 0.12 0.57 6.60 22.51 0.15 0.71 16 5 C -0.16 -0.81 9.99 22.37 0.22 -0.59 16 6 C -0.08 -0.24 8.66 22.25 0.19 -0.05 16 7 C -0.12 -0.30 5.39 -19.85 -0.11 -0.41 16 8 C -0.08 0.05 2.79 71.24 0.20 0.25 16 9 O -0.56 -1.12 12.81 -148.98 -1.91 -3.03 16 10 Si 0.75 -0.90 29.84 68.60 2.05 1.15 16 11 C -0.06 -0.06 9.68 22.25 0.22 0.16 16 12 C -0.21 -0.05 8.24 22.36 0.18 0.14 16 13 C 0.52 1.26 7.23 87.66 0.63 1.90 16 14 O -0.57 -7.52 16.10 16.00 0.26 -7.26 16 15 N -0.69 3.59 5.16 -440.03 -2.27 1.32 16 16 C 0.12 -0.51 4.32 45.51 0.20 -0.31 16 17 H 0.09 0.03 7.47 -2.39 -0.02 0.01 16 18 C -0.12 0.72 7.38 31.12 0.23 0.95 16 19 C -0.02 0.10 4.17 -11.01 -0.05 0.06 16 20 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 21 C 0.21 0.26 7.36 138.12 1.02 1.27 16 22 N -0.53 -3.97 11.25 -188.14 -2.12 -6.09 16 23 C -0.06 -0.26 11.87 83.52 0.99 0.73 16 24 C -0.05 0.06 12.04 83.09 1.00 1.06 16 25 N -0.56 1.54 5.94 -186.28 -1.11 0.43 16 26 C -0.14 0.87 7.35 31.12 0.23 1.10 16 27 H 0.09 -0.66 6.91 -2.38 -0.02 -0.67 16 28 H 0.06 -0.22 8.14 -2.39 -0.02 -0.23 16 29 H 0.11 -1.45 7.56 -2.39 -0.02 -1.47 16 30 H 0.12 -0.79 6.31 -2.39 -0.02 -0.81 16 31 H 0.14 0.57 8.06 -2.91 -0.02 0.55 16 32 H 0.14 -0.02 4.86 -2.91 -0.01 -0.03 16 33 H 0.10 -0.52 7.96 -2.39 -0.02 -0.54 16 34 H 0.39 -2.35 8.74 -74.06 -0.65 -2.99 16 35 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 36 H -0.30 -2.03 7.05 99.48 0.70 -1.33 16 37 H 0.14 -0.31 8.06 -2.91 -0.02 -0.34 16 38 H 0.16 -0.93 5.43 -2.91 -0.02 -0.95 16 39 H 0.42 -4.97 8.12 -92.71 -0.75 -5.72 16 40 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 41 H 0.10 -0.50 8.09 -2.39 -0.02 -0.52 16 42 H 0.18 0.17 8.06 -2.91 -0.02 0.14 16 43 H 0.21 -1.72 8.06 -2.91 -0.02 -1.74 16 44 H 0.43 -3.69 7.53 -92.70 -0.70 -4.39 16 45 H 0.10 -0.82 6.64 -2.39 -0.02 -0.84 16 46 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 Total: 0.00 -30.52 379.79 -0.75 -31.28 By element: Atomic # 1 Polarization: -22.88 SS G_CDS: -1.01 Total: -23.89 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: 6.04 Total: 8.80 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -5.49 Total: -4.34 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: -2.34 Total: -13.00 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.05 Total: 1.15 kcal Total: -30.52 -0.75 -31.28 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.713 kcal (2) G-P(sol) polarization free energy of solvation -30.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.277 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds