Wall clock time and date at job start Sun Mar 7 2021 12:27:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35529 * 125.68007 * 2 1 4 4 C 1.35445 * 108.87427 * 180.26907 * 3 2 1 5 5 C 1.50708 * 126.06911 * 179.79283 * 4 3 2 6 6 O 1.42899 * 109.46730 * 244.97233 * 5 4 3 7 7 Si 1.86295 * 109.47160 * 4.97246 * 5 4 3 8 8 C 1.39840 * 107.86575 * 359.76462 * 4 3 2 9 9 C 1.37652 * 125.67813 * 179.87382 * 2 1 3 10 10 C 1.46673 * 126.23083 * 359.97438 * 9 2 1 11 11 O 1.21697 * 120.00460 * 4.49407 * 10 9 2 12 12 N 1.34786 * 119.99956 * 184.49168 * 10 9 2 13 13 C 1.46496 * 119.99787 * 174.48014 * 12 10 9 14 14 H 1.09001 * 112.85612 * 336.19484 * 13 12 10 15 15 C 1.53958 * 113.53555 * 107.51021 * 13 12 10 16 16 C 1.53782 * 87.02096 * 89.18601 * 15 13 12 17 17 H 1.09000 * 113.61099 * 270.76623 * 16 15 13 18 18 C 1.50704 * 113.61228 * 139.95498 * 16 15 13 19 19 N 1.30501 * 125.64547 * 165.88769 * 18 16 15 20 20 C 1.34125 * 109.25067 * 179.97438 * 19 18 16 21 21 C 1.34668 * 108.02738 * 0.26869 * 20 19 18 22 22 N 1.35037 * 125.65029 * 345.85442 * 18 16 15 23 23 C 1.53783 * 87.17392 * 25.35924 * 16 15 13 24 24 H 1.09000 * 109.46621 * 272.10682 * 1 2 3 25 25 H 1.08997 * 109.46997 * 32.10413 * 1 2 3 26 26 H 1.09001 * 109.47309 * 152.10540 * 1 2 3 27 27 H 1.08001 * 125.56428 * 0.02562 * 3 2 1 28 28 H 1.09001 * 109.47280 * 124.97446 * 5 4 3 29 29 H 0.96705 * 113.99827 * 179.97438 * 6 5 4 30 30 H 1.48493 * 110.00049 * 178.68631 * 7 5 4 31 31 H 1.48501 * 109.99629 * 300.00319 * 7 5 4 32 32 H 1.08001 * 126.45697 * 179.97438 * 8 4 3 33 33 H 0.96993 * 119.99726 * 354.48056 * 12 10 9 34 34 H 1.08999 * 113.66357 * 334.65175 * 15 13 12 35 35 H 1.09005 * 113.60909 * 203.70603 * 15 13 12 36 36 H 1.08002 * 125.98441 * 179.97438 * 20 19 18 37 37 H 1.07993 * 126.59742 * 179.70060 * 21 20 19 38 38 H 0.97005 * 126.39834 * 0.06197 * 22 18 16 39 39 H 1.09000 * 113.60790 * 89.15581 * 23 16 15 40 40 H 1.08992 * 113.61238 * 220.05774 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7093 -0.0060 5 6 4.7537 1.6189 -0.0125 6 8 5.4715 1.4510 -1.2367 7 14 4.1935 3.3890 0.1412 8 6 3.5780 -0.6889 -0.0045 9 6 2.2678 -1.1182 0.0025 10 6 1.8124 -2.5124 0.0061 11 8 0.6247 -2.7648 -0.0755 12 7 2.7093 -3.5141 0.0996 13 6 2.2497 -4.8994 0.2251 14 1 1.2434 -4.9760 0.6369 15 6 2.4631 -5.7358 -1.0497 16 6 3.8503 -6.0903 -0.4884 17 1 4.6308 -5.3860 -0.7763 18 6 4.2449 -7.5267 -0.7170 19 7 5.4469 -8.0162 -0.5800 20 6 5.4257 -9.3267 -0.8646 21 6 4.1640 -9.6609 -1.1962 22 7 3.4133 -8.5205 -1.0968 23 6 3.2677 -5.8265 0.9101 24 1 -0.3632 0.0378 1.0270 25 1 -0.3633 0.8705 -0.5461 26 1 -0.3634 -0.9083 -0.4808 27 1 1.9082 2.1235 0.0004 28 1 5.4030 1.3691 0.8266 29 1 6.2591 2.0073 -1.3103 30 1 5.3706 4.2938 0.1679 31 1 3.3074 3.7418 -0.9971 32 1 4.4584 -1.3145 -0.0085 33 1 3.6590 -3.3177 0.0839 34 1 2.5003 -5.1408 -1.9622 35 1 1.7921 -6.5913 -1.1280 36 1 6.2732 -9.9957 -0.8378 37 1 3.8116 -10.6406 -1.4831 38 1 2.4625 -8.4403 -1.2713 39 1 2.8171 -6.7068 1.3685 40 1 3.9535 -5.3047 1.5774 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:27:08 Heat of formation + Delta-G solvation = 78.800065 kcal Electronic energy + Delta-G solvation = -24016.037043 eV Core-core repulsion = 20414.531626 eV Total energy + Delta-G solvation = -3601.505417 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -43.08670 -42.51677 -40.88106 -39.02257 -37.75082 -34.85781 -33.78557 -33.38239 -31.21446 -30.24483 -28.39019 -26.96116 -26.42015 -25.59869 -23.92163 -22.51376 -21.75208 -21.20272 -20.69584 -20.19761 -19.08672 -18.60040 -18.36610 -17.24976 -16.93400 -16.65488 -16.17804 -15.82733 -15.75273 -15.49955 -15.30524 -15.07831 -14.87684 -14.55972 -14.52066 -14.37255 -13.98446 -13.72283 -13.57751 -13.53317 -13.22149 -13.15291 -12.57130 -12.46290 -11.97146 -11.87647 -11.62117 -11.03615 -10.94615 -10.93391 -10.36067 -10.22851 -9.65606 -9.31872 -9.23083 -4.95019 0.44741 1.09684 1.31905 1.52260 1.54661 1.63309 1.99233 2.11468 2.20440 2.26577 2.34381 3.19646 3.29983 3.46751 3.50557 3.65736 3.70729 3.89008 3.93882 3.97390 4.11979 4.13565 4.28089 4.38155 4.42009 4.46220 4.50130 4.58468 4.60940 4.64848 4.71378 4.77265 4.79677 4.85471 4.96128 5.16777 5.21355 5.41857 5.68235 5.82783 5.92894 6.13737 6.39120 6.40636 6.54937 7.12908 7.17960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.404 5.404 3 C 0.032 3.968 4 C -0.162 4.162 5 C -0.038 4.038 6 O -0.537 6.537 7 Si 0.677 3.323 8 C -0.110 4.110 9 C -0.057 4.057 10 C 0.597 3.403 11 O -0.545 6.545 12 N -0.703 5.703 13 C 0.129 3.871 14 H 0.110 0.890 15 C -0.150 4.150 16 C -0.026 4.026 17 H 0.120 0.880 18 C 0.218 3.782 19 N -0.487 5.487 20 C -0.027 4.027 21 C -0.056 4.056 22 N -0.565 5.565 23 C -0.132 4.132 24 H 0.080 0.920 25 H 0.085 0.915 26 H 0.107 0.893 27 H 0.174 0.826 28 H 0.073 0.927 29 H 0.377 0.623 30 H -0.262 1.262 31 H -0.256 1.256 32 H 0.146 0.854 33 H 0.406 0.594 34 H 0.084 0.916 35 H 0.087 0.913 36 H 0.171 0.829 37 H 0.178 0.822 38 H 0.418 0.582 39 H 0.098 0.902 40 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.796 0.724 2.365 3.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.076 5.076 3 C -0.105 4.105 4 C -0.168 4.168 5 C -0.149 4.149 6 O -0.344 6.344 7 Si 0.578 3.422 8 C -0.136 4.136 9 C -0.169 4.169 10 C 0.386 3.614 11 O -0.424 6.424 12 N -0.354 5.354 13 C 0.023 3.977 14 H 0.128 0.872 15 C -0.189 4.189 16 C -0.046 4.046 17 H 0.138 0.862 18 C -0.046 4.046 19 N -0.206 5.206 20 C -0.175 4.175 21 C -0.190 4.190 22 N -0.169 5.169 23 C -0.171 4.171 24 H 0.098 0.902 25 H 0.104 0.896 26 H 0.126 0.874 27 H 0.191 0.809 28 H 0.091 0.909 29 H 0.224 0.776 30 H -0.187 1.187 31 H -0.180 1.180 32 H 0.163 0.837 33 H 0.242 0.758 34 H 0.103 0.897 35 H 0.105 0.895 36 H 0.188 0.812 37 H 0.195 0.805 38 H 0.256 0.744 39 H 0.116 0.884 40 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.811 1.281 2.090 3.730 hybrid contribution 0.440 -0.659 -1.134 1.383 sum -2.371 0.623 0.956 2.631 Atomic orbital electron populations 1.22403 0.75455 1.05889 1.04245 1.43765 1.07014 1.04602 1.52189 1.21804 0.89991 0.91739 1.06970 1.18590 0.92138 0.93824 1.12225 1.24010 0.93719 1.08589 0.88555 1.86613 1.43013 1.66353 1.38396 0.95377 0.83712 0.74336 0.88743 1.21192 0.94310 0.94633 1.03465 1.19904 0.90242 0.87475 1.19326 1.16931 0.85451 0.83457 0.75554 1.90791 1.16264 1.84770 1.50526 1.45279 1.09940 1.05206 1.74963 1.21791 0.99718 0.79894 0.96269 0.87157 1.23559 0.95511 1.00347 0.99502 1.21088 0.97535 0.88346 0.97615 0.86205 1.22933 0.86000 0.92343 1.03328 1.70250 1.20127 1.09635 1.20594 1.22418 0.96673 0.92730 1.05688 1.22823 0.93180 0.92031 1.10951 1.43266 1.11954 1.08765 1.52930 1.23409 0.98009 0.99700 0.96004 0.90168 0.89636 0.87407 0.80943 0.90910 0.77563 1.18680 1.18008 0.83680 0.75785 0.89684 0.89474 0.81178 0.80483 0.74404 0.88363 0.89420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.69 59.85 0.64 0.60 16 2 N -0.40 -0.54 3.16 -120.24 -0.38 -0.92 16 3 C 0.03 0.02 9.94 -16.92 -0.17 -0.15 16 4 C -0.16 -0.20 5.46 -105.02 -0.57 -0.77 16 5 C -0.04 0.00 3.01 36.01 0.11 0.11 16 6 O -0.54 -0.71 12.86 -35.23 -0.45 -1.16 16 7 Si 0.68 -0.82 30.60 -169.99 -5.20 -6.02 16 8 C -0.11 -0.13 10.29 -39.12 -0.40 -0.53 16 9 C -0.06 -0.11 6.89 -81.98 -0.56 -0.67 16 10 C 0.60 1.26 7.77 -12.85 -0.10 1.16 16 11 O -0.54 -2.56 14.25 5.19 0.07 -2.48 16 12 N -0.70 0.55 5.24 -54.23 -0.28 0.26 16 13 C 0.13 -0.18 4.30 -67.02 -0.29 -0.47 16 14 H 0.11 -0.04 7.53 -51.93 -0.39 -0.43 16 15 C -0.15 0.30 7.37 -25.82 -0.19 0.11 16 16 C -0.03 0.03 4.16 -90.96 -0.38 -0.35 16 17 H 0.12 -0.15 8.14 -51.93 -0.42 -0.57 16 18 C 0.22 0.31 7.36 -155.42 -1.14 -0.84 16 19 N -0.49 -2.04 11.25 -10.82 -0.12 -2.16 16 20 C -0.03 -0.06 11.87 -17.81 -0.21 -0.28 16 21 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 22 N -0.57 0.30 5.94 -10.23 -0.06 0.23 16 23 C -0.13 0.28 7.38 -25.92 -0.19 0.09 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 25 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 26 H 0.11 0.11 6.12 -51.93 -0.32 -0.21 16 27 H 0.17 -0.37 6.21 -52.49 -0.33 -0.69 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 30 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 31 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 32 H 0.15 -0.11 7.45 -52.49 -0.39 -0.50 16 33 H 0.41 -1.06 7.60 -40.82 -0.31 -1.37 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.09 -0.28 6.64 -51.93 -0.34 -0.63 16 36 H 0.17 0.07 8.06 -52.49 -0.42 -0.35 16 37 H 0.18 -0.53 8.06 -52.49 -0.42 -0.95 16 38 H 0.42 -1.39 7.54 -40.82 -0.31 -1.69 16 39 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 40 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 LS Contribution 336.76 15.07 5.07 5.07 Total: 0.00 -10.79 336.76 -10.00 -20.79 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -4.98 Total: -11.41 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -3.66 Total: -2.20 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.85 Total: -2.58 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.38 Total: -3.64 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.20 Total: -6.02 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -10.79 -10.00 -20.79 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.586 kcal (2) G-P(sol) polarization free energy of solvation -10.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.786 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds