Wall clock time and date at job start Sun Mar 7 2021 12:27:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.38419 * 119.89237 * 119.72226 * 4 2 1 6 6 C 1.38246 * 120.33690 * 179.76500 * 5 4 2 7 7 C 1.38277 * 120.12114 * 0.50701 * 6 5 4 8 8 F 1.35094 * 120.11324 * 179.72542 * 7 6 5 9 9 C 1.39866 * 119.77453 * 359.74931 * 7 6 5 10 10 C 1.47691 * 120.16082 * 180.02562 * 9 7 6 11 11 O 1.21575 * 120.00490 * 359.97387 * 10 9 7 12 12 N 1.34776 * 119.99956 * 179.97438 * 10 9 7 13 13 C 1.46493 * 120.00420 * 179.97438 * 12 10 9 14 14 H 1.09004 * 112.85219 * 336.19426 * 13 12 10 15 15 C 1.53778 * 113.61932 * 107.50191 * 13 12 10 16 16 C 1.53781 * 87.08213 * 89.11479 * 15 13 12 17 17 H 1.08992 * 113.61897 * 270.88283 * 16 15 13 18 18 C 1.50706 * 113.68545 * 139.99470 * 16 15 13 19 19 N 1.30505 * 125.64630 * 167.49324 * 18 16 15 20 20 C 1.34125 * 109.25470 * 180.02562 * 19 18 16 21 21 C 1.34670 * 108.02122 * 359.97438 * 20 19 18 22 22 N 1.35040 * 125.65354 * 347.18316 * 18 16 15 23 23 C 1.53782 * 87.08069 * 25.43916 * 16 15 13 24 24 C 1.37896 * 119.88914 * 299.99352 * 4 2 1 25 25 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 26 26 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 27 27 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 28 28 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 29 29 H 1.07997 * 119.83014 * 359.97438 * 5 4 2 30 30 H 1.07998 * 119.93782 * 180.25910 * 6 5 4 31 31 H 0.97010 * 119.99943 * 359.97438 * 12 10 9 32 32 H 1.09000 * 113.62162 * 203.66707 * 15 13 12 33 33 H 1.09006 * 113.61471 * 334.56629 * 15 13 12 34 34 H 1.08000 * 125.98450 * 180.02562 * 20 19 18 35 35 H 1.08002 * 126.58607 * 180.02562 * 21 20 19 36 36 H 0.97000 * 126.39800 * 0.02562 * 22 18 16 37 37 H 1.08998 * 113.60746 * 220.02137 * 23 16 15 38 38 H 1.09000 * 113.61885 * 89.11191 * 23 16 15 39 39 H 1.08000 * 120.06341 * 359.96136 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7222 -0.0338 -2.1430 6 6 3.1921 -0.6779 -3.2724 7 6 2.8653 -2.0016 -3.5029 8 9 3.3200 -2.6292 -4.6094 9 6 2.0621 -2.6883 -2.5867 10 6 1.7083 -4.1025 -2.8241 11 8 2.1150 -4.6723 -3.8180 12 7 0.9345 -4.7613 -1.9388 13 6 0.5831 -6.1638 -2.1745 14 1 0.6323 -6.4414 -3.2274 15 6 1.3108 -7.1464 -1.2419 16 6 0.1396 -6.9619 -0.2626 17 1 0.2798 -6.1367 0.4354 18 6 -0.2877 -8.2373 0.4172 19 7 -1.0870 -8.3201 1.4455 20 6 -1.2431 -9.6091 1.7817 21 6 -0.5133 -10.3534 0.9291 22 7 0.0883 -9.4840 0.0596 23 6 -0.7210 -6.5967 -1.4837 24 6 1.5969 -2.0306 -1.4464 25 1 -0.3934 0.4416 -0.7651 26 1 1.7924 -0.5138 0.8900 27 1 1.5613 2.4680 1.2084 28 1 3.5344 1.7705 -0.0322 29 1 2.9764 1.0015 -1.9701 30 1 3.8121 -0.1450 -3.9781 31 1 0.6103 -4.3067 -1.1455 32 1 1.3878 -8.1560 -1.6455 33 1 2.2602 -6.7674 -0.8634 34 1 -1.8487 -9.9843 2.5934 35 1 -0.4238 -11.4297 0.9285 36 1 0.6772 -9.7193 -0.6743 37 1 -1.4118 -5.7738 -1.3004 38 1 -1.1995 -7.4559 -1.9535 39 1 0.9766 -2.5550 -0.7346 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:27:27 Heat of formation + Delta-G solvation = 11.779438 kcal Electronic energy + Delta-G solvation = -25766.430366 eV Core-core repulsion = 21785.302130 eV Total energy + Delta-G solvation = -3981.128236 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.117 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -49.89341 -43.10809 -41.54874 -40.44550 -39.13486 -37.59330 -34.75923 -33.41895 -32.69428 -32.34992 -30.51632 -26.99472 -26.78627 -26.62499 -25.29862 -23.41776 -22.51204 -21.80604 -21.68341 -20.58403 -19.32723 -19.06711 -18.37565 -18.29719 -17.42855 -16.98230 -16.87522 -16.37841 -16.25058 -15.99110 -15.85024 -15.75300 -15.50560 -15.41871 -14.93281 -14.65486 -14.56183 -14.40184 -14.34837 -13.77473 -13.76280 -13.58253 -13.23279 -12.92027 -12.61576 -12.28742 -12.00974 -11.96435 -11.64251 -11.12891 -10.96572 -10.95952 -10.63255 -10.47250 -10.22284 -9.87667 -9.34061 -5.18790 -0.56246 -0.14162 1.07505 1.10700 1.47456 1.59451 1.81874 1.85217 2.12114 2.18854 2.42251 2.97566 3.15078 3.19993 3.26392 3.31996 3.38571 3.45990 3.51182 3.64155 3.82559 3.92506 3.97460 4.11271 4.26173 4.38434 4.40942 4.43827 4.48072 4.57683 4.62474 4.64046 4.71058 4.76344 4.81664 4.83271 4.91063 5.00304 5.14388 5.36638 5.49504 5.80665 6.27668 6.36876 6.38860 7.04287 7.15553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.688 3.312 4 C -0.140 4.140 5 C -0.059 4.059 6 C -0.156 4.156 7 C 0.167 3.833 8 F -0.111 7.111 9 C -0.176 4.176 10 C 0.563 3.437 11 O -0.517 6.517 12 N -0.708 5.708 13 C 0.125 3.875 14 H 0.112 0.888 15 C -0.150 4.150 16 C -0.026 4.026 17 H 0.119 0.881 18 C 0.217 3.783 19 N -0.487 5.487 20 C -0.027 4.027 21 C -0.056 4.056 22 N -0.565 5.565 23 C -0.132 4.132 24 C -0.030 4.030 25 H 0.381 0.619 26 H 0.119 0.881 27 H -0.251 1.251 28 H -0.255 1.255 29 H 0.142 0.858 30 H 0.150 0.850 31 H 0.403 0.597 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.171 0.829 35 H 0.178 0.822 36 H 0.418 0.582 37 H 0.087 0.913 38 H 0.098 0.902 39 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.246 2.252 -0.320 2.288 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.178 4.178 3 Si 0.590 3.410 4 C -0.141 4.141 5 C -0.077 4.077 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.089 7.089 9 C -0.180 4.180 10 C 0.350 3.650 11 O -0.393 6.393 12 N -0.361 5.361 13 C 0.019 3.981 14 H 0.130 0.870 15 C -0.189 4.189 16 C -0.046 4.046 17 H 0.137 0.863 18 C -0.047 4.047 19 N -0.206 5.206 20 C -0.175 4.175 21 C -0.189 4.189 22 N -0.169 5.169 23 C -0.171 4.171 24 C -0.049 4.049 25 H 0.229 0.771 26 H 0.136 0.864 27 H -0.176 1.176 28 H -0.180 1.180 29 H 0.159 0.841 30 H 0.168 0.832 31 H 0.239 0.761 32 H 0.106 0.894 33 H 0.102 0.898 34 H 0.188 0.812 35 H 0.195 0.805 36 H 0.256 0.744 37 H 0.105 0.895 38 H 0.117 0.883 39 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.226 2.734 0.342 2.764 hybrid contribution 0.673 -1.570 -0.231 1.724 sum 0.899 1.164 0.111 1.475 Atomic orbital electron populations 1.86527 1.16728 1.81639 1.49422 1.25049 0.85517 1.10243 0.96966 0.94762 0.81000 0.77550 0.87731 1.20344 1.00606 0.94960 0.98145 1.21113 0.94579 0.99685 0.92335 1.21175 1.03409 0.92963 0.99975 1.17743 0.93651 0.90572 0.83361 1.91631 1.86028 1.82092 1.49116 1.20023 1.04820 0.95073 0.98042 1.17971 0.78452 0.85590 0.82948 1.90878 1.52448 1.68474 1.27515 1.45528 1.52621 1.11987 1.25928 1.21786 0.95004 0.80389 1.00890 0.86980 1.23525 0.98438 1.00329 0.96602 1.21075 0.96520 0.92113 0.94857 0.86328 1.22915 0.99058 0.86548 0.96157 1.70246 1.16916 1.21027 1.12396 1.22420 1.03828 0.88914 1.02349 1.22829 1.03074 0.97100 0.95927 1.43266 1.39186 1.07121 1.27321 1.23406 0.96336 1.02629 0.94699 1.21033 0.95665 0.93705 0.94521 0.77125 0.86398 1.17609 1.18029 0.84081 0.83210 0.76079 0.89356 0.89751 0.81157 0.80457 0.74386 0.89470 0.88305 0.84245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.24 12.76 -35.23 -0.45 0.79 16 2 C -0.07 0.19 2.82 36.00 0.10 0.29 16 3 Si 0.69 -2.16 29.78 -169.99 -5.06 -7.22 16 4 C -0.14 0.34 5.38 -104.68 -0.56 -0.23 16 5 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 6 C -0.16 0.22 10.01 -39.56 -0.40 -0.18 16 7 C 0.17 0.24 7.29 -38.96 -0.28 -0.05 16 8 F -0.11 -0.47 15.55 2.25 0.04 -0.43 16 9 C -0.18 -0.11 5.88 -104.91 -0.62 -0.73 16 10 C 0.56 1.18 7.77 -12.40 -0.10 1.08 16 11 O -0.52 -3.15 14.94 5.30 0.08 -3.07 16 12 N -0.71 0.77 5.21 -54.01 -0.28 0.49 16 13 C 0.12 -0.16 4.32 -67.12 -0.29 -0.45 16 14 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 15 C -0.15 0.31 7.36 -25.92 -0.19 0.12 16 16 C -0.03 0.03 4.16 -90.96 -0.38 -0.35 16 17 H 0.12 -0.19 8.14 -51.93 -0.42 -0.61 16 18 C 0.22 0.28 7.36 -155.41 -1.14 -0.86 16 19 N -0.49 -1.98 11.25 -10.81 -0.12 -2.10 16 20 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 21 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 22 N -0.57 0.32 5.94 -10.22 -0.06 0.26 16 23 C -0.13 0.27 7.38 -25.91 -0.19 0.08 16 24 C -0.03 0.05 9.09 -39.19 -0.36 -0.30 16 25 H 0.38 -2.27 8.70 45.56 0.40 -1.88 16 26 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 27 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 28 H -0.26 0.23 7.11 56.52 0.40 0.63 16 29 H 0.14 -0.70 4.86 -52.49 -0.25 -0.95 16 30 H 0.15 -0.49 8.06 -52.49 -0.42 -0.91 16 31 H 0.40 -1.36 6.73 -40.82 -0.27 -1.64 16 32 H 0.09 -0.29 6.65 -51.93 -0.35 -0.63 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.17 0.06 8.06 -52.49 -0.42 -0.37 16 35 H 0.18 -0.54 8.06 -52.49 -0.42 -0.96 16 36 H 0.42 -1.39 7.54 -40.82 -0.31 -1.70 16 37 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 39 H 0.14 -0.50 6.40 -52.49 -0.34 -0.84 16 LS Contribution 334.04 15.07 5.03 5.03 Total: 0.00 -10.87 334.04 -10.07 -20.94 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -4.08 Total: -12.45 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -5.16 Total: -2.23 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.46 Total: -1.35 kcal Atomic # 8 Polarization: -1.91 SS G_CDS: -0.37 Total: -2.28 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -2.16 SS G_CDS: -5.06 Total: -7.22 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -10.87 -10.07 -20.94 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.715 kcal (2) G-P(sol) polarization free energy of solvation -10.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.065 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.935 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds