Wall clock time and date at job start Sun Mar 7 2021 12:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.38419 * 119.89237 * 119.72226 * 4 2 1 6 6 C 1.38246 * 120.33690 * 179.76500 * 5 4 2 7 7 C 1.38277 * 120.12114 * 0.50701 * 6 5 4 8 8 F 1.35094 * 120.11324 * 179.72542 * 7 6 5 9 9 C 1.39866 * 119.77453 * 359.74931 * 7 6 5 10 10 C 1.47691 * 120.16082 * 180.02562 * 9 7 6 11 11 O 1.21575 * 120.00490 * 359.97387 * 10 9 7 12 12 N 1.34776 * 119.99956 * 179.97438 * 10 9 7 13 13 C 1.46493 * 120.00420 * 179.97438 * 12 10 9 14 14 H 1.09004 * 112.85219 * 336.19426 * 13 12 10 15 15 C 1.53778 * 113.61932 * 107.50191 * 13 12 10 16 16 C 1.53781 * 87.08213 * 89.11479 * 15 13 12 17 17 H 1.08992 * 113.61897 * 270.88283 * 16 15 13 18 18 C 1.50706 * 113.68545 * 139.99470 * 16 15 13 19 19 N 1.30505 * 125.64630 * 167.49324 * 18 16 15 20 20 C 1.34125 * 109.25470 * 180.02562 * 19 18 16 21 21 C 1.34670 * 108.02122 * 359.97438 * 20 19 18 22 22 N 1.35040 * 125.65354 * 347.18316 * 18 16 15 23 23 C 1.53782 * 87.08069 * 25.43916 * 16 15 13 24 24 C 1.37896 * 119.88914 * 299.99352 * 4 2 1 25 25 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 26 26 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 27 27 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 28 28 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 29 29 H 1.07997 * 119.83014 * 359.97438 * 5 4 2 30 30 H 1.07998 * 119.93782 * 180.25910 * 6 5 4 31 31 H 0.97010 * 119.99943 * 359.97438 * 12 10 9 32 32 H 1.09000 * 113.62162 * 203.66707 * 15 13 12 33 33 H 1.09006 * 113.61471 * 334.56629 * 15 13 12 34 34 H 1.08000 * 125.98450 * 180.02562 * 20 19 18 35 35 H 1.08002 * 126.58607 * 180.02562 * 21 20 19 36 36 H 0.97000 * 126.39800 * 0.02562 * 22 18 16 37 37 H 1.08998 * 113.60746 * 220.02137 * 23 16 15 38 38 H 1.09000 * 113.61885 * 89.11191 * 23 16 15 39 39 H 1.08000 * 120.06341 * 359.96136 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7222 -0.0338 -2.1430 6 6 3.1921 -0.6779 -3.2724 7 6 2.8653 -2.0016 -3.5029 8 9 3.3200 -2.6292 -4.6094 9 6 2.0621 -2.6883 -2.5867 10 6 1.7083 -4.1025 -2.8241 11 8 2.1150 -4.6723 -3.8180 12 7 0.9345 -4.7613 -1.9388 13 6 0.5831 -6.1638 -2.1745 14 1 0.6323 -6.4414 -3.2274 15 6 1.3108 -7.1464 -1.2419 16 6 0.1396 -6.9619 -0.2626 17 1 0.2798 -6.1367 0.4354 18 6 -0.2877 -8.2373 0.4172 19 7 -1.0870 -8.3201 1.4455 20 6 -1.2431 -9.6091 1.7817 21 6 -0.5133 -10.3534 0.9291 22 7 0.0883 -9.4840 0.0596 23 6 -0.7210 -6.5967 -1.4837 24 6 1.5969 -2.0306 -1.4464 25 1 -0.3934 0.4416 -0.7651 26 1 1.7924 -0.5138 0.8900 27 1 1.5613 2.4680 1.2084 28 1 3.5344 1.7705 -0.0322 29 1 2.9764 1.0015 -1.9701 30 1 3.8121 -0.1450 -3.9781 31 1 0.6103 -4.3067 -1.1455 32 1 1.3878 -8.1560 -1.6455 33 1 2.2602 -6.7674 -0.8634 34 1 -1.8487 -9.9843 2.5934 35 1 -0.4238 -11.4297 0.9285 36 1 0.6772 -9.7193 -0.6743 37 1 -1.4118 -5.7738 -1.3004 38 1 -1.1995 -7.4559 -1.9535 39 1 0.9766 -2.5550 -0.7346 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:27:26 Heat of formation + Delta-G solvation = 9.672569 kcal Electronic energy + Delta-G solvation = -25766.521727 eV Core-core repulsion = 21785.302130 eV Total energy + Delta-G solvation = -3981.219597 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.117 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.01568 -43.12104 -41.56155 -40.34074 -39.17370 -37.42102 -34.82200 -33.46628 -32.61157 -32.22903 -30.51719 -26.86876 -26.66896 -26.56503 -25.23700 -23.33481 -22.51381 -21.83356 -21.67646 -20.55237 -19.27008 -19.02640 -18.29549 -18.25567 -17.34810 -16.98364 -16.92642 -16.33647 -16.17039 -15.96682 -15.84231 -15.68188 -15.49871 -15.39077 -14.84211 -14.59540 -14.57010 -14.40261 -14.31945 -13.67334 -13.64138 -13.48873 -13.17109 -12.85717 -12.54781 -12.14585 -11.93857 -11.85237 -11.55540 -11.25515 -11.05886 -11.03268 -10.48231 -10.42670 -10.17130 -9.81172 -9.36486 -4.95728 -0.50763 -0.03009 1.07644 1.32265 1.57068 1.67513 1.84962 2.03170 2.10417 2.20187 2.46652 3.04445 3.24053 3.33586 3.34790 3.45217 3.55372 3.59417 3.66969 3.74809 3.99725 4.04665 4.11324 4.22247 4.44379 4.50150 4.51838 4.57092 4.57267 4.63243 4.72724 4.76649 4.82188 4.86306 4.92011 4.94941 4.99107 5.12724 5.14417 5.41547 5.59622 5.77644 6.30350 6.46516 6.80877 6.99901 7.11529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.067 4.067 3 Si 0.771 3.229 4 C -0.134 4.134 5 C -0.051 4.051 6 C -0.152 4.152 7 C 0.135 3.865 8 F -0.136 7.136 9 C -0.188 4.188 10 C 0.559 3.441 11 O -0.567 6.567 12 N -0.693 5.693 13 C 0.121 3.879 14 H 0.097 0.903 15 C -0.141 4.141 16 C -0.023 4.023 17 H 0.122 0.878 18 C 0.209 3.791 19 N -0.530 5.530 20 C -0.063 4.063 21 C -0.044 4.044 22 N -0.558 5.558 23 C -0.120 4.120 24 C -0.025 4.025 25 H 0.397 0.603 26 H 0.118 0.882 27 H -0.303 1.303 28 H -0.280 1.280 29 H 0.167 0.833 30 H 0.167 0.833 31 H 0.415 0.585 32 H 0.102 0.898 33 H 0.080 0.920 34 H 0.178 0.822 35 H 0.209 0.791 36 H 0.431 0.569 37 H 0.092 0.908 38 H 0.101 0.899 39 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.340 2.696 0.086 2.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.177 4.177 3 Si 0.677 3.323 4 C -0.135 4.135 5 C -0.068 4.068 6 C -0.170 4.170 7 C 0.114 3.886 8 F -0.114 7.114 9 C -0.192 4.192 10 C 0.348 3.652 11 O -0.447 6.447 12 N -0.345 5.345 13 C 0.016 3.984 14 H 0.115 0.885 15 C -0.180 4.180 16 C -0.043 4.043 17 H 0.139 0.861 18 C -0.055 4.055 19 N -0.250 5.250 20 C -0.210 4.210 21 C -0.179 4.179 22 N -0.163 5.163 23 C -0.159 4.159 24 C -0.044 4.044 25 H 0.248 0.752 26 H 0.135 0.865 27 H -0.232 1.232 28 H -0.207 1.207 29 H 0.184 0.816 30 H 0.185 0.815 31 H 0.254 0.746 32 H 0.120 0.880 33 H 0.098 0.902 34 H 0.195 0.805 35 H 0.225 0.775 36 H 0.272 0.728 37 H 0.110 0.890 38 H 0.119 0.881 39 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 0.107 3.165 0.746 3.253 hybrid contribution 0.666 -1.670 -0.257 1.816 sum 0.773 1.495 0.489 1.752 Atomic orbital electron populations 1.86501 1.16734 1.82047 1.50683 1.25114 0.85600 1.10420 0.96615 0.93825 0.78028 0.75091 0.85330 1.20470 1.00118 0.94659 0.98212 1.21385 0.93462 1.00654 0.91343 1.21390 1.03153 0.91843 1.00656 1.18187 0.95189 0.91865 0.83344 1.91560 1.86614 1.82769 1.50492 1.20014 1.05684 0.94477 0.99023 1.18284 0.78176 0.86225 0.82561 1.90845 1.54625 1.69601 1.29608 1.45438 1.51391 1.12071 1.25625 1.21791 0.95945 0.80381 1.00319 0.88490 1.23502 0.97862 1.00776 0.95843 1.21119 0.96884 0.91359 0.94901 0.86056 1.23239 0.98719 0.87717 0.95833 1.70178 1.18556 1.22290 1.13996 1.22751 1.05458 0.88982 1.03802 1.23289 1.01500 0.98339 0.94749 1.43280 1.38953 1.06572 1.27464 1.23337 0.95895 1.02767 0.93944 1.21188 0.95343 0.94036 0.93796 0.75227 0.86453 1.23161 1.20702 0.81599 0.81503 0.74618 0.87993 0.90162 0.80517 0.77466 0.72813 0.88962 0.88105 0.82524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 3.39 12.76 -148.98 -1.90 1.48 16 2 C -0.07 0.47 2.82 71.23 0.20 0.67 16 3 Si 0.77 -5.67 29.78 68.60 2.04 -3.63 16 4 C -0.13 0.82 5.38 -19.90 -0.11 0.71 16 5 C -0.05 0.36 8.66 22.31 0.19 0.55 16 6 C -0.15 0.48 10.01 22.28 0.22 0.70 16 7 C 0.13 0.53 7.29 22.67 0.17 0.70 16 8 F -0.14 -1.48 15.55 44.97 0.70 -0.78 16 9 C -0.19 -0.39 5.88 -20.05 -0.12 -0.51 16 10 C 0.56 3.14 7.77 86.74 0.67 3.82 16 11 O -0.57 -8.32 14.94 -3.95 -0.06 -8.38 16 12 N -0.69 1.12 5.21 -443.05 -2.31 -1.19 16 13 C 0.12 -0.25 4.32 45.52 0.20 -0.05 16 14 H 0.10 0.16 7.46 -2.38 -0.02 0.14 16 15 C -0.14 0.58 7.36 31.12 0.23 0.81 16 16 C -0.02 0.06 4.16 -11.01 -0.05 0.01 16 17 H 0.12 -0.40 8.14 -2.39 -0.02 -0.42 16 18 C 0.21 0.55 7.36 138.13 1.02 1.57 16 19 N -0.53 -4.66 11.25 -188.13 -2.12 -6.78 16 20 C -0.06 -0.32 11.87 83.52 0.99 0.67 16 21 C -0.04 0.03 12.04 83.09 1.00 1.03 16 22 N -0.56 0.98 5.94 -186.26 -1.11 -0.12 16 23 C -0.12 0.50 7.38 31.12 0.23 0.73 16 24 C -0.03 0.10 9.09 22.52 0.20 0.31 16 25 H 0.40 -5.47 8.70 -74.06 -0.64 -6.11 16 26 H 0.12 -0.76 7.96 -2.39 -0.02 -0.78 16 27 H -0.30 -0.48 7.11 99.48 0.71 0.22 16 28 H -0.28 0.85 7.11 99.48 0.71 1.56 16 29 H 0.17 -2.04 4.86 -2.91 -0.01 -2.05 16 30 H 0.17 -1.20 8.06 -2.91 -0.02 -1.23 16 31 H 0.42 -2.90 6.73 -92.70 -0.62 -3.52 16 32 H 0.10 -0.71 6.65 -2.39 -0.02 -0.73 16 33 H 0.08 -0.22 8.14 -2.38 -0.02 -0.24 16 34 H 0.18 0.30 8.06 -2.91 -0.02 0.27 16 35 H 0.21 -1.62 8.06 -2.91 -0.02 -1.64 16 36 H 0.43 -3.31 7.54 -92.71 -0.70 -4.01 16 37 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 38 H 0.10 -0.41 8.09 -2.39 -0.02 -0.43 16 39 H 0.16 -1.30 6.40 -2.91 -0.02 -1.32 16 Total: 0.00 -27.96 334.04 -0.48 -28.44 By element: Atomic # 1 Polarization: -19.98 SS G_CDS: -0.79 Total: -20.77 kcal Atomic # 6 Polarization: 6.67 SS G_CDS: 5.05 Total: 11.72 kcal Atomic # 7 Polarization: -2.56 SS G_CDS: -5.53 Total: -8.09 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.96 Total: -6.89 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.70 Total: -0.78 kcal Atomic # 14 Polarization: -5.67 SS G_CDS: 2.04 Total: -3.63 kcal Total: -27.96 -0.48 -28.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.114 kcal (2) G-P(sol) polarization free energy of solvation -27.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.441 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds