Wall clock time and date at job start Sun Mar 7 2021 12:27:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.34806 * 125.90426 * 2 1 4 4 C 1.40999 * 107.48531 * 180.27314 * 3 2 1 5 5 C 1.50697 * 126.25599 * 179.70964 * 4 3 2 6 6 O 1.42900 * 109.47229 * 105.02359 * 5 4 3 7 7 Si 1.86304 * 109.47311 * 345.02390 * 5 4 3 8 8 C 1.34803 * 107.48451 * 359.72823 * 4 3 2 9 9 C 1.50703 * 125.90173 * 179.97438 * 8 4 3 10 10 N 1.36653 * 125.90085 * 179.81303 * 2 1 3 11 11 C 1.39665 * 125.68358 * 359.97438 * 10 2 1 12 12 C 1.40196 * 120.15298 * 89.41058 * 11 10 2 13 13 C 1.47570 * 120.19608 * 0.02562 * 12 11 10 14 14 O 1.21581 * 119.99955 * 0.02562 * 13 12 11 15 15 N 1.34776 * 120.00110 * 179.97438 * 13 12 11 16 16 C 1.46500 * 119.99905 * 179.97438 * 15 13 12 17 17 H 1.09002 * 112.85059 * 336.19399 * 16 15 13 18 18 C 1.53783 * 113.61371 * 107.50645 * 16 15 13 19 19 C 1.53773 * 87.08512 * 89.11576 * 18 16 15 20 20 H 1.08999 * 113.61353 * 270.88571 * 19 18 16 21 21 C 1.50697 * 113.69491 * 139.99349 * 19 18 16 22 22 N 1.30497 * 125.65123 * 167.15422 * 21 19 18 23 23 C 1.34130 * 109.25565 * 179.89410 * 22 21 19 24 24 C 1.34672 * 108.01915 * 0.36931 * 23 22 21 25 25 N 1.35045 * 125.64689 * 347.45935 * 21 19 18 26 26 C 1.53782 * 113.61257 * 205.00012 * 16 15 13 27 27 C 1.39662 * 119.61248 * 179.77291 * 12 11 10 28 28 C 1.37833 * 119.91478 * 0.48566 * 27 12 11 29 29 C 1.38532 * 120.31134 * 359.76648 * 28 27 12 30 30 C 1.38066 * 120.39148 * 359.97438 * 29 28 27 31 31 H 1.08996 * 109.47160 * 270.18481 * 1 2 3 32 32 H 1.09005 * 109.46887 * 30.18467 * 1 2 3 33 33 H 1.09004 * 109.47078 * 150.17761 * 1 2 3 34 34 H 1.07998 * 126.25934 * 0.03125 * 3 2 1 35 35 H 1.08998 * 109.47243 * 225.02199 * 5 4 3 36 36 H 0.96704 * 113.99951 * 180.02562 * 6 5 4 37 37 H 1.48504 * 109.99637 * 298.68049 * 7 5 4 38 38 H 1.48493 * 109.99914 * 59.99847 * 7 5 4 39 39 H 1.08999 * 109.47053 * 270.00445 * 9 8 4 40 40 H 1.09000 * 109.46926 * 30.00263 * 9 8 4 41 41 H 1.09000 * 109.46782 * 150.00318 * 9 8 4 42 42 H 0.96999 * 120.00283 * 0.02562 * 15 13 12 43 43 H 1.09001 * 113.61330 * 203.66325 * 18 16 15 44 44 H 1.09004 * 113.61452 * 334.56321 * 18 16 15 45 45 H 1.08000 * 125.98850 * 180.19178 * 23 22 21 46 46 H 1.07994 * 126.58939 * 179.81835 * 24 23 22 47 47 H 0.96998 * 126.39805 * 359.97438 * 25 21 19 48 48 H 1.08992 * 113.61870 * 25.43255 * 26 16 15 49 49 H 1.08996 * 113.61486 * 156.33791 * 26 16 15 50 50 H 1.07995 * 120.04337 * 180.27579 * 27 12 11 51 51 H 1.08000 * 119.84507 * 179.74008 * 28 27 12 52 52 H 1.08004 * 119.80279 * 180.02562 * 29 28 27 53 53 H 1.08008 * 119.95939 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2975 1.0919 0.0000 4 6 3.6353 0.6464 -0.0064 5 6 4.8648 1.5178 -0.0149 6 8 5.4625 1.5109 1.2831 7 14 4.3879 3.2604 -0.4697 8 6 3.6133 -0.7014 -0.0040 9 6 4.8195 -1.6049 -0.0095 10 7 2.3083 -1.1069 0.0036 11 6 1.8671 -2.4321 0.0084 12 6 1.6324 -3.1005 -1.2013 13 6 1.8505 -2.4084 -2.4863 14 8 2.2354 -1.2552 -2.4979 15 7 1.6241 -3.0550 -3.6469 16 6 1.8402 -2.3676 -4.9225 17 1 1.7745 -1.2831 -4.8354 18 6 3.0879 -2.8523 -5.6798 19 6 2.1820 -3.9052 -6.3396 20 1 2.1146 -4.8369 -5.7780 21 6 2.4727 -4.1233 -7.8021 22 7 2.0219 -5.1092 -8.5285 23 6 2.4817 -4.9815 -9.7820 24 6 3.2531 -3.8787 -9.8324 25 7 3.2478 -3.3339 -8.5767 26 6 1.0096 -2.9441 -6.0812 27 6 1.1959 -4.4271 -1.1834 28 6 0.9893 -5.0665 0.0201 29 6 1.2172 -4.4011 1.2135 30 6 1.6540 -3.0913 1.2106 31 1 -0.3633 0.0033 1.0276 32 1 -0.3633 0.8884 -0.5167 33 1 -0.3633 -0.8916 -0.5111 34 1 1.9667 2.1200 0.0005 35 1 5.5772 1.1338 -0.7449 36 1 6.2606 2.0526 1.3515 37 1 3.7942 3.2856 -1.8307 38 1 3.4167 3.7954 0.5181 39 1 5.1043 -1.8244 -1.0384 40 1 5.6468 -1.1096 0.4988 41 1 4.5796 -2.5342 0.5073 42 1 1.3174 -3.9751 -3.6377 43 1 3.4860 -2.1182 -6.3803 44 1 3.8534 -3.2793 -5.0319 45 1 2.2725 -5.6479 -10.6057 46 1 3.7751 -3.4973 -10.6975 47 1 3.7137 -2.5310 -8.2957 48 1 0.0974 -3.4451 -5.7576 49 1 0.8396 -2.2351 -6.8915 50 1 1.0172 -4.9501 -2.1112 51 1 0.6477 -6.0910 0.0326 52 1 1.0531 -4.9102 2.1518 53 1 1.8291 -2.5791 2.1453 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_12335856.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:27:49 Heat of formation + Delta-G solvation = 115.411429 kcal Electronic energy + Delta-G solvation = -37323.517049 eV Core-core repulsion = 32744.081800 eV Total energy + Delta-G solvation = -4579.435248 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.184 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -43.14621 -42.96240 -41.35259 -40.01899 -38.91017 -37.62920 -34.92913 -34.22535 -33.71455 -33.47801 -32.35584 -30.64111 -30.43134 -30.20551 -27.34462 -26.89793 -26.50221 -25.06335 -24.64747 -23.55847 -22.67469 -22.04855 -21.81968 -21.12245 -20.56183 -19.99148 -19.20204 -18.76523 -18.27441 -17.87443 -17.40137 -16.74176 -16.45721 -16.30589 -16.06780 -15.97499 -15.67159 -15.54790 -15.44194 -15.24114 -15.09858 -14.90886 -14.75764 -14.59240 -14.37192 -14.32086 -14.23742 -13.88337 -13.79472 -13.63691 -13.54849 -13.40437 -13.23028 -13.17237 -12.98477 -12.67472 -12.56242 -12.44860 -12.40002 -11.95756 -11.94577 -11.58746 -11.11942 -11.07985 -11.04477 -10.37251 -10.22519 -10.14924 -10.05892 -9.68518 -9.38073 -8.80805 -4.97950 -0.47376 -0.00206 1.06117 1.09411 1.38368 1.61667 1.68443 1.77507 1.80977 1.88972 2.08964 2.09637 2.18563 2.55388 3.22016 3.31194 3.43777 3.55529 3.57792 3.66855 3.72355 3.76241 3.92386 3.96006 4.01055 4.14284 4.16023 4.16730 4.19641 4.20267 4.29519 4.38425 4.47218 4.50440 4.51797 4.53442 4.53905 4.56428 4.60066 4.61956 4.66175 4.72540 4.80906 4.83387 4.88735 4.91027 4.96804 5.01482 5.09843 5.11553 5.14958 5.25185 5.28144 5.41522 5.59570 5.76306 5.94156 6.11085 6.34707 6.44292 6.52590 7.02253 7.06061 7.09645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.037 3.963 3 C -0.226 4.226 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.564 6.564 7 Si 0.789 3.211 8 C 0.061 3.939 9 C -0.075 4.075 10 N -0.389 5.389 11 C 0.141 3.859 12 C -0.143 4.143 13 C 0.550 3.450 14 O -0.546 6.546 15 N -0.695 5.695 16 C 0.126 3.874 17 H 0.088 0.912 18 C -0.139 4.139 19 C -0.019 4.019 20 H 0.124 0.876 21 C 0.209 3.791 22 N -0.529 5.529 23 C -0.062 4.062 24 C -0.045 4.045 25 N -0.559 5.559 26 C -0.121 4.121 27 C -0.072 4.072 28 C -0.104 4.104 29 C -0.074 4.074 30 C -0.123 4.123 31 H 0.082 0.918 32 H 0.079 0.921 33 H 0.061 0.939 34 H 0.120 0.880 35 H 0.074 0.926 36 H 0.397 0.603 37 H -0.308 1.308 38 H -0.302 1.302 39 H 0.067 0.933 40 H 0.090 0.910 41 H 0.066 0.934 42 H 0.414 0.586 43 H 0.098 0.902 44 H 0.080 0.920 45 H 0.178 0.822 46 H 0.208 0.792 47 H 0.430 0.570 48 H 0.092 0.908 49 H 0.096 0.904 50 H 0.164 0.836 51 H 0.172 0.828 52 H 0.164 0.836 53 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.997 -4.326 -0.723 4.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.072 4.072 3 C -0.250 4.250 4 C -0.187 4.187 5 C -0.147 4.147 6 O -0.373 6.373 7 Si 0.697 3.303 8 C -0.050 4.050 9 C -0.132 4.132 10 N -0.063 5.063 11 C 0.051 3.949 12 C -0.147 4.147 13 C 0.337 3.663 14 O -0.423 6.423 15 N -0.348 5.348 16 C 0.020 3.980 17 H 0.107 0.893 18 C -0.178 4.178 19 C -0.039 4.039 20 H 0.142 0.858 21 C -0.055 4.055 22 N -0.249 5.249 23 C -0.209 4.209 24 C -0.179 4.179 25 N -0.163 5.163 26 C -0.160 4.160 27 C -0.091 4.091 28 C -0.121 4.121 29 C -0.093 4.093 30 C -0.142 4.142 31 H 0.100 0.900 32 H 0.098 0.902 33 H 0.080 0.920 34 H 0.138 0.862 35 H 0.092 0.908 36 H 0.247 0.753 37 H -0.236 1.236 38 H -0.231 1.231 39 H 0.086 0.914 40 H 0.109 0.891 41 H 0.085 0.915 42 H 0.253 0.747 43 H 0.116 0.884 44 H 0.099 0.901 45 H 0.195 0.805 46 H 0.225 0.775 47 H 0.271 0.729 48 H 0.110 0.890 49 H 0.115 0.885 50 H 0.182 0.818 51 H 0.189 0.811 52 H 0.182 0.818 53 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.517 -4.343 -0.608 4.416 hybrid contribution 0.217 0.390 -0.569 0.724 sum 0.734 -3.953 -1.178 4.189 Atomic orbital electron populations 1.20278 0.86971 1.03055 1.03054 1.20413 0.94013 0.84939 1.07830 1.20456 0.93397 0.97026 1.14083 1.18795 0.93597 0.92616 1.13720 1.24038 0.93932 1.08429 0.88257 1.86472 1.46896 1.74180 1.29789 0.95271 0.84435 0.76023 0.74601 1.20350 0.84564 0.93727 1.06311 1.20270 0.93222 0.97393 1.02305 1.40999 1.05212 1.03003 1.57049 1.17830 1.00275 0.83155 0.93651 1.20182 1.06368 0.96398 0.91732 1.18386 0.77475 0.85998 0.84434 1.90920 1.45758 1.17973 1.87692 1.45421 1.68324 1.17050 1.04012 1.21691 0.96436 0.97555 0.82328 0.89340 1.23469 0.97239 0.97891 0.99224 1.21090 0.97608 0.99686 0.85508 0.85782 1.23242 0.96308 0.90021 0.95974 1.70173 1.26247 1.23780 1.04697 1.22753 1.02375 1.00324 0.95461 1.23291 1.06627 0.98543 0.89457 1.43291 1.39102 1.24484 1.09461 1.23324 0.97652 0.98043 0.97002 1.21650 0.95294 0.91168 1.01013 1.21715 0.97451 1.02012 0.90963 1.21691 0.94352 0.92435 1.00816 1.21451 1.00075 0.96384 0.96308 0.89959 0.90177 0.92009 0.86244 0.90810 0.75264 1.23614 1.23051 0.91437 0.89143 0.91547 0.74732 0.88410 0.90145 0.80463 0.77512 0.72895 0.88967 0.88529 0.81844 0.81076 0.81815 0.85100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.56 10.09 71.24 0.72 0.16 16 2 C 0.04 0.50 5.96 41.02 0.24 0.75 16 3 C -0.23 -3.73 9.27 22.16 0.21 -3.52 16 4 C -0.18 -2.67 5.39 -19.98 -0.11 -2.78 16 5 C -0.04 -0.29 2.49 71.23 0.18 -0.11 16 6 O -0.56 -3.45 12.86 -148.98 -1.92 -5.36 16 7 Si 0.79 4.94 30.84 68.60 2.12 7.05 16 8 C 0.06 0.77 6.02 41.02 0.25 1.02 16 9 C -0.07 -0.52 9.87 71.24 0.70 0.19 16 10 N -0.39 -4.34 1.45 -319.54 -0.46 -4.80 16 11 C 0.14 0.76 4.52 38.49 0.17 0.93 16 12 C -0.14 -0.26 5.89 -20.00 -0.12 -0.38 16 13 C 0.55 2.70 7.77 86.71 0.67 3.37 16 14 O -0.55 -7.51 13.28 -3.97 -0.05 -7.56 16 15 N -0.69 1.69 5.21 -443.17 -2.31 -0.62 16 16 C 0.13 -0.26 4.32 45.52 0.20 -0.06 16 17 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 18 C -0.14 0.60 7.36 31.12 0.23 0.83 16 19 C -0.02 0.06 4.16 -11.02 -0.05 0.02 16 20 H 0.12 -0.58 8.14 -2.39 -0.02 -0.60 16 21 C 0.21 0.44 7.37 138.13 1.02 1.46 16 22 N -0.53 -4.28 11.25 -188.13 -2.12 -6.40 16 23 C -0.06 -0.28 11.87 83.52 0.99 0.71 16 24 C -0.04 0.04 12.04 83.09 1.00 1.04 16 25 N -0.56 1.08 5.94 -186.28 -1.11 -0.03 16 26 C -0.12 0.51 7.38 31.12 0.23 0.74 16 27 C -0.07 0.45 9.54 22.52 0.21 0.66 16 28 C -0.10 0.88 10.02 22.24 0.22 1.10 16 29 C -0.07 0.44 10.03 22.30 0.22 0.66 16 30 C -0.12 -0.09 9.96 22.35 0.22 0.14 16 31 H 0.08 0.37 8.14 -2.39 -0.02 0.35 16 32 H 0.08 0.53 8.14 -2.38 -0.02 0.51 16 33 H 0.06 0.40 7.83 -2.38 -0.02 0.38 16 34 H 0.12 2.01 6.55 -2.91 -0.02 1.99 16 35 H 0.07 0.36 7.96 -2.39 -0.02 0.34 16 36 H 0.40 -2.10 8.74 -74.05 -0.65 -2.75 16 37 H -0.31 -4.25 7.11 99.48 0.71 -3.55 16 38 H -0.30 -4.11 7.06 99.48 0.70 -3.41 16 39 H 0.07 0.44 8.14 -2.39 -0.02 0.42 16 40 H 0.09 0.51 7.87 -2.39 -0.02 0.50 16 41 H 0.07 0.33 7.83 -2.39 -0.02 0.31 16 42 H 0.41 -3.51 6.73 -92.71 -0.62 -4.14 16 43 H 0.10 -0.64 6.65 -2.39 -0.02 -0.65 16 44 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 45 H 0.18 0.20 8.06 -2.91 -0.02 0.18 16 46 H 0.21 -1.65 8.06 -2.91 -0.02 -1.67 16 47 H 0.43 -3.25 7.54 -92.71 -0.70 -3.94 16 48 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 49 H 0.10 -0.34 8.09 -2.39 -0.02 -0.36 16 50 H 0.16 -2.08 6.40 -2.91 -0.02 -2.10 16 51 H 0.17 -2.50 8.06 -2.91 -0.02 -2.52 16 52 H 0.16 -1.81 8.06 -2.91 -0.02 -1.83 16 53 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 Total: 0.00 -34.33 435.10 0.61 -33.72 By element: Atomic # 1 Polarization: -21.96 SS G_CDS: -0.96 Total: -22.92 kcal Atomic # 6 Polarization: -0.51 SS G_CDS: 7.42 Total: 6.91 kcal Atomic # 7 Polarization: -5.85 SS G_CDS: -6.00 Total: -11.84 kcal Atomic # 8 Polarization: -10.95 SS G_CDS: -1.97 Total: -12.92 kcal Atomic # 14 Polarization: 4.94 SS G_CDS: 2.12 Total: 7.05 kcal Total: -34.33 0.61 -33.72 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_12335856.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.133 kcal (2) G-P(sol) polarization free energy of solvation -34.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.722 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.411 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds