Wall clock time and date at job start Sun Mar 7 2021 12:29:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47033 * 2 1 4 4 C 1.50704 * 109.47064 * 240.00168 * 2 1 3 5 5 C 1.34196 * 126.53990 * 105.03882 * 4 2 1 6 6 N 1.36858 * 109.96829 * 179.97438 * 5 4 2 7 7 C 1.37411 * 109.97856 * 0.02562 * 6 5 4 8 8 C 1.39330 * 133.24743 * 180.02562 * 7 6 5 9 9 C 1.36355 * 120.23330 * 179.97438 * 8 7 6 10 10 C 1.40158 * 120.66983 * 0.02562 * 9 8 7 11 11 C 1.47656 * 119.97500 * 179.97438 * 10 9 8 12 12 O 1.21575 * 120.00345 * 180.02562 * 11 10 9 13 13 N 1.34774 * 119.99707 * 359.97438 * 11 10 9 14 14 C 1.46500 * 120.00115 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.84674 * 23.80336 * 14 13 11 16 16 C 1.53777 * 113.61631 * 155.00237 * 14 13 11 17 17 C 1.53778 * 87.08486 * 89.11425 * 16 14 13 18 18 H 1.08994 * 113.61952 * 270.80565 * 17 16 14 19 19 C 1.50700 * 113.61424 * 139.97539 * 17 16 14 20 20 N 1.30502 * 125.64425 * 95.28103 * 19 17 16 21 21 C 1.34127 * 109.25683 * 180.14781 * 20 19 17 22 22 C 1.34672 * 108.01948 * 359.61488 * 21 20 19 23 23 N 1.35041 * 125.65474 * 275.00229 * 19 17 16 24 24 C 1.53783 * 113.61372 * 252.49940 * 14 13 11 25 25 C 1.39190 * 120.05391 * 0.24946 * 10 9 8 26 26 C 1.39230 * 119.39579 * 359.48457 * 25 10 9 27 27 H 0.96703 * 114.00197 * 299.99691 * 1 2 3 28 28 H 1.08992 * 109.47142 * 120.00229 * 2 1 3 29 29 H 1.48502 * 109.99844 * 178.68403 * 3 2 1 30 30 H 1.48495 * 110.00078 * 300.00263 * 3 2 1 31 31 H 1.07996 * 125.01369 * 359.97438 * 5 4 2 32 32 H 0.96990 * 125.01455 * 180.02562 * 6 5 4 33 33 H 1.07998 * 119.88014 * 359.97438 * 8 7 6 34 34 H 1.08005 * 119.66051 * 179.97438 * 9 8 7 35 35 H 0.96998 * 120.00244 * 0.02562 * 13 11 10 36 36 H 1.09000 * 113.61791 * 334.56744 * 16 14 13 37 37 H 1.09000 * 113.69290 * 203.67808 * 16 14 13 38 38 H 1.08002 * 125.99481 * 179.88589 * 21 20 19 39 39 H 1.07997 * 126.59503 * 180.24939 * 22 21 20 40 40 H 0.96995 * 126.39762 * 0.02562 * 23 19 17 41 41 H 1.09005 * 113.61363 * 156.33285 * 24 14 13 42 42 H 1.09001 * 113.61356 * 25.43196 * 24 14 13 43 43 H 1.08005 * 120.29978 * 179.72539 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4614 -0.1386 -2.3227 6 7 2.8037 -1.1003 -3.2343 7 6 2.4952 -2.3454 -2.7415 8 6 2.6341 -3.6349 -3.2505 9 6 2.2295 -4.7102 -2.5162 10 6 1.6691 -4.5367 -1.2433 11 6 1.2355 -5.7119 -0.4617 12 8 0.7489 -5.5620 0.6423 13 7 1.3783 -6.9509 -0.9725 14 6 0.9476 -8.1170 -0.1973 15 1 0.1859 -7.8747 0.5438 16 6 0.5976 -9.3380 -1.0641 17 6 2.0768 -9.7431 -0.9521 18 1 2.7057 -9.3212 -1.7360 19 6 2.2848 -11.2244 -0.7686 20 7 2.5319 -12.0814 -1.7213 21 6 2.6555 -13.3076 -1.1920 22 6 2.4868 -13.2053 0.1402 23 7 2.2516 -11.8839 0.4093 24 6 2.1133 -8.9483 0.3639 25 6 1.5156 -3.2569 -0.7178 26 6 1.9332 -2.1575 -1.4631 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 0.8899 29 1 3.5346 1.7703 0.0320 30 1 1.5614 2.4679 -1.2084 31 1 2.5978 0.9236 -2.4618 32 1 3.2048 -0.9285 -4.1005 33 1 3.0639 -3.7832 -4.2301 34 1 2.3411 -5.7057 -2.9200 35 1 1.7661 -7.0706 -1.8535 36 1 0.2910 -9.0803 -2.0779 37 1 -0.0845 -10.0373 -0.5806 38 1 2.8595 -14.2169 -1.7379 39 1 2.5293 -14.0108 0.8583 40 1 2.0908 -11.4942 1.2828 41 1 1.8458 -9.5404 1.2392 42 1 3.0305 -8.3760 0.5031 43 1 1.0802 -3.1184 0.2608 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_13287722.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:29:02 Heat of formation + Delta-G solvation = 89.109644 kcal Electronic energy + Delta-G solvation = -27735.379500 eV Core-core repulsion = 23749.642718 eV Total energy + Delta-G solvation = -3985.736782 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.137 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.07402 -42.51064 -41.15202 -39.37646 -37.80559 -37.38452 -34.49401 -33.39848 -33.36759 -31.10913 -30.69764 -30.15163 -26.92545 -26.49778 -26.39590 -24.65767 -23.52399 -22.57246 -21.72469 -21.70429 -20.61962 -20.47904 -19.17607 -19.01451 -18.37047 -18.28776 -17.44815 -17.08024 -16.34970 -16.07591 -15.80788 -15.65239 -15.60903 -15.31828 -15.21622 -15.03889 -14.79701 -14.78646 -14.53032 -14.51636 -14.13690 -13.83290 -13.69171 -13.49958 -13.48350 -12.70923 -12.58602 -12.53048 -12.03223 -11.92271 -11.87266 -11.56909 -10.94584 -10.92642 -10.89083 -10.81185 -10.20578 -10.12134 -9.35734 -9.31085 -8.86282 -5.03294 -0.08124 0.16086 1.10562 1.27691 1.40216 1.64593 1.91807 1.93971 1.94501 2.03246 2.17638 2.21855 2.92535 3.22431 3.32409 3.50427 3.54506 3.57050 3.65597 3.70136 3.79109 3.93002 3.99458 4.10834 4.14570 4.23507 4.35649 4.44650 4.45979 4.49876 4.51679 4.54891 4.63853 4.73011 4.77085 4.81384 4.88651 4.98284 4.99965 5.17770 5.23194 5.33845 5.45110 5.53872 5.56556 5.83289 5.94627 6.32106 6.39983 6.49625 6.73103 7.18360 7.26967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.038 4.038 3 Si 0.687 3.313 4 C -0.144 4.144 5 C 0.056 3.944 6 N -0.584 5.584 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.065 4.065 10 C -0.170 4.170 11 C 0.570 3.430 12 O -0.535 6.535 13 N -0.712 5.712 14 C 0.126 3.874 15 H 0.111 0.889 16 C -0.132 4.132 17 C -0.026 4.026 18 H 0.119 0.881 19 C 0.218 3.782 20 N -0.488 5.488 21 C -0.028 4.028 22 C -0.056 4.056 23 N -0.565 5.565 24 C -0.150 4.150 25 C 0.011 3.989 26 C -0.102 4.102 27 H 0.380 0.620 28 H 0.072 0.928 29 H -0.256 1.256 30 H -0.253 1.253 31 H 0.170 0.830 32 H 0.422 0.578 33 H 0.129 0.871 34 H 0.130 0.870 35 H 0.402 0.598 36 H 0.085 0.915 37 H 0.097 0.903 38 H 0.171 0.829 39 H 0.178 0.822 40 H 0.418 0.582 41 H 0.087 0.913 42 H 0.084 0.916 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.474 2.272 1.082 2.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.070 4.070 6 N -0.186 5.186 7 C 0.011 3.989 8 C -0.153 4.153 9 C -0.085 4.085 10 C -0.174 4.174 11 C 0.359 3.641 12 O -0.412 6.412 13 N -0.364 5.364 14 C 0.020 3.980 15 H 0.129 0.871 16 C -0.172 4.172 17 C -0.046 4.046 18 H 0.137 0.863 19 C -0.046 4.046 20 N -0.207 5.207 21 C -0.176 4.176 22 C -0.190 4.190 23 N -0.169 5.169 24 C -0.189 4.189 25 C -0.008 4.008 26 C -0.107 4.107 27 H 0.228 0.772 28 H 0.090 0.910 29 H -0.180 1.180 30 H -0.178 1.178 31 H 0.187 0.813 32 H 0.260 0.740 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.238 0.762 36 H 0.104 0.896 37 H 0.116 0.884 38 H 0.188 0.812 39 H 0.195 0.805 40 H 0.256 0.744 41 H 0.105 0.895 42 H 0.103 0.897 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.843 2.862 -0.091 3.405 hybrid contribution 0.444 -0.788 0.158 0.918 sum 2.287 2.074 0.066 3.088 Atomic orbital electron populations 1.86535 1.17408 1.81814 1.49434 1.23996 0.85453 1.09349 0.96168 0.94988 0.80773 0.77608 0.87848 1.19638 1.07872 0.91337 0.96256 1.21583 1.01912 0.94077 0.89474 1.41693 1.54726 1.04149 1.18066 1.18449 0.99787 0.86489 0.94129 1.19674 1.05734 0.88714 1.01199 1.20594 0.96601 0.98389 0.92937 1.19494 1.08423 0.93132 0.96372 1.18154 0.77598 0.82719 0.85629 1.90792 1.44204 1.85991 1.20243 1.45549 1.64684 1.05096 1.21081 1.21744 0.97003 0.84479 0.94763 0.87105 1.23401 0.95469 0.96436 1.01854 1.21080 0.98544 0.85230 0.99721 0.86333 1.22947 1.04692 0.95876 0.81086 1.70242 1.18910 1.00402 1.31137 1.22415 1.07074 0.96335 0.91727 1.22824 1.10863 0.86161 0.99137 1.43268 1.55082 1.08151 1.10376 1.23528 1.00713 0.98291 0.96399 1.20666 0.92243 0.89089 0.98828 1.18895 1.04564 0.92753 0.94444 0.77239 0.90967 1.18021 1.17779 0.81326 0.74042 0.85299 0.85245 0.76217 0.89589 0.88434 0.81193 0.80482 0.74370 0.89494 0.89735 0.84278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.59 12.86 -35.23 -0.45 -1.05 16 2 C -0.04 -0.02 3.05 36.01 0.11 0.09 16 3 Si 0.69 -1.01 30.80 -169.99 -5.23 -6.25 16 4 C -0.14 -0.38 5.61 -102.69 -0.58 -0.96 16 5 C 0.06 0.06 10.43 -16.73 -0.17 -0.12 16 6 N -0.58 0.01 6.05 -10.61 -0.06 -0.05 16 7 C 0.12 0.21 7.27 -83.95 -0.61 -0.40 16 8 C -0.13 0.00 10.00 -39.85 -0.40 -0.40 16 9 C -0.07 0.01 9.46 -39.54 -0.37 -0.36 16 10 C -0.17 -0.38 5.87 -104.98 -0.62 -1.00 16 11 C 0.57 1.62 7.76 -12.42 -0.10 1.53 16 12 O -0.54 -3.43 15.93 5.30 0.08 -3.35 16 13 N -0.71 0.32 5.21 -54.02 -0.28 0.04 16 14 C 0.13 -0.11 4.32 -67.12 -0.29 -0.40 16 15 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 16 C -0.13 0.22 7.38 -25.92 -0.19 0.03 16 17 C -0.03 0.03 4.17 -90.96 -0.38 -0.35 16 18 H 0.12 -0.17 8.14 -51.93 -0.42 -0.59 16 19 C 0.22 0.33 7.36 -155.42 -1.14 -0.82 16 20 N -0.49 -2.05 11.25 -10.81 -0.12 -2.17 16 21 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 22 C -0.06 -0.01 12.04 -16.56 -0.20 -0.21 16 23 N -0.57 0.22 5.94 -10.23 -0.06 0.16 16 24 C -0.15 0.27 7.35 -25.92 -0.19 0.07 16 25 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 26 C -0.10 -0.35 6.34 -105.16 -0.67 -1.02 16 27 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 28 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 30 H -0.25 -0.24 7.04 56.52 0.40 0.16 16 31 H 0.17 -0.15 6.30 -52.49 -0.33 -0.48 16 32 H 0.42 -1.38 8.96 -40.82 -0.37 -1.74 16 33 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 34 H 0.13 -0.42 6.36 -52.48 -0.33 -0.76 16 35 H 0.40 -1.14 6.70 -40.82 -0.27 -1.41 16 36 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 38 H 0.17 0.08 8.06 -52.49 -0.42 -0.35 16 39 H 0.18 -0.51 8.06 -52.49 -0.42 -0.94 16 40 H 0.42 -1.31 7.53 -40.82 -0.31 -1.62 16 41 H 0.09 -0.26 6.64 -51.93 -0.34 -0.61 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.14 0.56 7.64 -52.48 -0.40 0.16 16 LS Contribution 363.12 15.07 5.47 5.47 Total: 0.00 -12.49 363.12 -11.96 -24.46 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -4.92 Total: -12.34 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -6.38 Total: -4.93 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: -0.53 Total: -2.02 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -0.37 Total: -4.39 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.23 Total: -6.25 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.49 -11.96 -24.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13287722.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.565 kcal (2) G-P(sol) polarization free energy of solvation -12.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds