Wall clock time and date at job start Sun Mar 7 2021 12:29:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34665 * 124.84851 * 2 1 4 4 C 1.36771 * 108.39235 * 179.97438 * 3 2 1 5 5 C 1.47262 * 126.93650 * 179.97438 * 4 3 2 6 6 O 1.21628 * 119.99975 * 180.02562 * 5 4 3 7 7 N 1.34776 * 120.00476 * 0.02929 * 5 4 3 8 8 C 1.46499 * 119.99960 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.85321 * 336.19125 * 8 7 5 10 10 C 1.53780 * 113.61195 * 107.50166 * 8 7 5 11 11 C 1.53783 * 87.08309 * 89.11537 * 10 8 7 12 12 H 1.09004 * 113.61230 * 270.88027 * 11 10 8 13 13 C 1.50694 * 113.61534 * 139.98040 * 11 10 8 14 14 N 1.30502 * 125.65219 * 167.52463 * 13 11 10 15 15 C 1.34123 * 109.25906 * 179.97438 * 14 13 11 16 16 C 1.34660 * 108.02110 * 0.02562 * 15 14 13 17 17 N 1.35042 * 125.65344 * 347.21847 * 13 11 10 18 18 C 1.53774 * 87.07896 * 25.42851 * 11 10 8 19 19 C 1.46683 * 106.12039 * 0.02562 * 4 3 2 20 20 C 1.34485 * 106.33089 * 359.97438 * 19 4 3 21 21 C 1.50707 * 125.57429 * 179.97438 * 20 19 4 22 22 O 1.42900 * 109.47198 * 149.99763 * 21 20 19 23 23 Si 1.86299 * 109.46630 * 30.00315 * 21 20 19 24 24 H 1.09000 * 109.47223 * 89.97579 * 1 2 3 25 25 H 1.09005 * 109.47273 * 209.97628 * 1 2 3 26 26 H 1.08999 * 109.47496 * 329.97451 * 1 2 3 27 27 H 1.07999 * 125.80306 * 359.73982 * 3 2 1 28 28 H 0.96998 * 119.99511 * 359.97438 * 7 5 4 29 29 H 1.09009 * 113.61605 * 203.66228 * 10 8 7 30 30 H 1.09003 * 113.62131 * 334.56409 * 10 8 7 31 31 H 1.08002 * 125.98981 * 180.02562 * 15 14 13 32 32 H 1.08007 * 126.59205 * 180.02562 * 16 15 14 33 33 H 0.96997 * 126.39525 * 0.02562 * 17 13 11 34 34 H 1.09004 * 113.61647 * 220.01293 * 18 11 10 35 35 H 1.09006 * 113.68956 * 89.13166 * 18 11 10 36 36 H 1.07994 * 126.83832 * 180.02562 * 19 4 3 37 37 H 1.08995 * 109.47098 * 270.00006 * 21 20 19 38 38 H 0.96693 * 114.00159 * 180.02562 * 22 21 20 39 39 H 1.48496 * 110.00535 * 59.99861 * 23 21 20 40 40 H 1.48499 * 109.99844 * 181.31908 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 0.0006 5 6 4.7283 1.5959 0.0003 6 8 5.8446 1.1130 0.0004 7 7 4.5733 2.9347 -0.0001 8 6 5.7494 3.8082 0.0002 9 1 6.6370 3.3230 0.4061 10 6 5.9917 4.5153 -1.3437 11 6 5.0868 5.6445 -0.8232 12 1 4.0306 5.4966 -1.0485 13 6 5.5756 7.0240 -1.1824 14 7 4.8893 8.1280 -1.0676 15 6 5.6399 9.1604 -1.4795 16 6 6.8366 8.6778 -1.8648 17 7 6.7984 7.3233 -1.6712 18 6 5.4821 5.2008 0.5951 19 6 3.5375 -0.7491 0.0003 20 6 2.2447 -1.1197 0.0002 21 6 1.7397 -2.5396 -0.0006 22 8 0.4809 -2.5978 0.6731 23 14 2.9649 -3.6348 0.8769 24 1 -0.3634 0.0004 -1.0277 25 1 -0.3634 -0.8902 0.5135 26 1 -0.3634 0.8897 0.5142 27 1 1.8766 2.1241 -0.0040 28 1 3.6830 3.3198 -0.0005 29 1 7.0270 4.8206 -1.4961 30 1 5.5764 3.9821 -2.1990 31 1 5.3376 10.1971 -1.4988 32 1 7.6685 9.2502 -2.2481 33 1 7.5149 6.6954 -1.8534 34 1 4.6555 5.2210 1.3053 35 1 6.3779 5.6929 0.9742 36 1 4.3980 -1.4016 0.0010 37 1 1.6179 -2.8813 -1.0284 38 1 0.0957 -3.4840 0.7111 39 1 3.1399 -3.1794 2.2795 40 1 2.4939 -5.0430 0.8553 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_13287730.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:29:08 Heat of formation + Delta-G solvation = 76.374688 kcal Electronic energy + Delta-G solvation = -23857.904158 eV Core-core repulsion = 20256.293568 eV Total energy + Delta-G solvation = -3601.610590 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.07930 -42.39717 -40.85487 -38.99289 -37.86301 -34.49744 -33.64819 -33.41227 -31.57292 -30.45592 -27.68744 -26.77945 -26.52215 -25.77318 -23.79158 -22.50859 -21.74088 -21.09488 -20.52263 -20.32707 -18.94633 -18.53788 -18.42716 -17.15985 -16.76052 -16.62654 -16.14091 -15.95778 -15.63740 -15.53333 -15.36920 -15.28801 -14.75029 -14.59396 -14.53357 -14.30973 -13.89128 -13.56314 -13.39165 -13.32596 -13.20582 -13.01161 -12.54116 -12.43149 -12.07474 -11.83275 -11.46888 -11.03902 -11.02095 -10.99707 -10.79594 -10.11074 -9.54493 -9.32867 -9.14670 -4.88601 0.74953 1.02782 1.11487 1.49828 1.58697 1.89004 2.05797 2.13685 2.18694 2.29381 2.55912 3.09131 3.32721 3.41774 3.64643 3.67864 3.82755 3.92795 3.98700 4.11748 4.26220 4.31341 4.40347 4.47392 4.49363 4.54634 4.61876 4.64290 4.67799 4.78798 4.89632 4.92666 4.99523 4.99755 5.04626 5.11462 5.18388 5.58832 5.70568 5.80921 6.02226 6.24784 6.50345 6.51941 6.64200 7.14945 7.35097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.427 5.427 3 C 0.066 3.934 4 C -0.259 4.259 5 C 0.594 3.406 6 O -0.588 6.588 7 N -0.700 5.700 8 C 0.124 3.876 9 H 0.093 0.907 10 C -0.140 4.140 11 C -0.021 4.021 12 H 0.123 0.877 13 C 0.210 3.790 14 N -0.531 5.531 15 C -0.064 4.064 16 C -0.045 4.045 17 N -0.558 5.558 18 C -0.122 4.122 19 C -0.159 4.159 20 C 0.013 3.987 21 C -0.046 4.046 22 O -0.552 6.552 23 Si 0.767 3.233 24 H 0.083 0.917 25 H 0.108 0.892 26 H 0.099 0.901 27 H 0.206 0.794 28 H 0.413 0.587 29 H 0.099 0.901 30 H 0.080 0.920 31 H 0.177 0.823 32 H 0.208 0.792 33 H 0.431 0.569 34 H 0.089 0.911 35 H 0.097 0.903 36 H 0.158 0.842 37 H 0.103 0.897 38 H 0.399 0.601 39 H -0.311 1.311 40 H -0.272 1.272 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.371 -0.715 -2.961 3.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.101 5.101 3 C -0.071 4.071 4 C -0.269 4.269 5 C 0.385 3.615 6 O -0.469 6.469 7 N -0.352 5.352 8 C 0.018 3.982 9 H 0.112 0.888 10 C -0.180 4.180 11 C -0.041 4.041 12 H 0.141 0.859 13 C -0.054 4.054 14 N -0.251 5.251 15 C -0.210 4.210 16 C -0.180 4.180 17 N -0.163 5.163 18 C -0.161 4.161 19 C -0.183 4.183 20 C -0.097 4.097 21 C -0.155 4.155 22 O -0.364 6.364 23 Si 0.671 3.329 24 H 0.101 0.899 25 H 0.126 0.874 26 H 0.118 0.882 27 H 0.223 0.777 28 H 0.250 0.750 29 H 0.117 0.883 30 H 0.099 0.901 31 H 0.194 0.806 32 H 0.225 0.775 33 H 0.272 0.728 34 H 0.108 0.892 35 H 0.116 0.884 36 H 0.175 0.825 37 H 0.120 0.880 38 H 0.252 0.748 39 H -0.239 1.239 40 H -0.197 1.197 Dipole moment (debyes) X Y Z Total from point charges -2.556 -0.909 -1.958 3.346 hybrid contribution -0.317 -0.139 -0.187 0.393 sum -2.873 -1.048 -2.145 3.735 Atomic orbital electron populations 1.22640 0.74800 1.06631 1.04630 1.43731 1.08131 1.04803 1.53412 1.22432 0.89246 0.93183 1.02246 1.20267 0.92116 0.93819 1.20727 1.17575 0.87717 0.81955 0.74266 1.90749 1.27468 1.76048 1.52612 1.45349 1.09823 1.04665 1.75329 1.21703 0.89675 0.89946 0.96843 0.88849 1.23496 1.00512 0.95553 0.98389 1.21113 1.01197 0.84363 0.97444 0.85945 1.23285 0.83439 0.96757 1.01926 1.70172 1.33628 0.98780 1.22557 1.22740 0.92639 0.99438 1.06230 1.23280 1.02404 0.83659 1.08623 1.43287 1.14637 1.08839 1.49504 1.23330 1.03512 0.93557 0.95737 1.21750 0.95224 0.93683 1.07604 1.19926 0.90193 0.88104 1.11443 1.24409 0.92580 0.95964 1.02561 1.86383 1.33962 1.36293 1.79724 0.93496 0.85585 0.74543 0.79257 0.89880 0.87384 0.88229 0.77690 0.75005 0.88255 0.90092 0.80557 0.77506 0.72795 0.89209 0.88449 0.82481 0.87979 0.74806 1.23887 1.19750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.28 10.71 127.77 1.37 1.09 16 2 N -0.43 -0.06 3.09 -533.23 -1.65 -1.70 16 3 C 0.07 -0.08 10.83 83.91 0.91 0.83 16 4 C -0.26 -1.27 6.29 -19.04 -0.12 -1.39 16 5 C 0.59 4.22 7.81 86.62 0.68 4.90 16 6 O -0.59 -9.18 16.57 -4.12 -0.07 -9.25 16 7 N -0.70 0.50 5.25 -443.46 -2.33 -1.83 16 8 C 0.12 -0.15 4.32 45.52 0.20 0.04 16 9 H 0.09 0.26 7.46 -2.39 -0.02 0.24 16 10 C -0.14 0.53 7.35 31.12 0.23 0.75 16 11 C -0.02 0.05 4.17 -11.02 -0.05 0.01 16 12 H 0.12 -0.42 8.14 -2.38 -0.02 -0.44 16 13 C 0.21 0.59 7.36 138.13 1.02 1.60 16 14 N -0.53 -4.70 11.25 -188.14 -2.12 -6.82 16 15 C -0.06 -0.33 11.87 83.52 0.99 0.67 16 16 C -0.05 0.02 12.04 83.08 1.00 1.02 16 17 N -0.56 0.87 5.94 -186.28 -1.11 -0.24 16 18 C -0.12 0.42 7.37 31.12 0.23 0.65 16 19 C -0.16 -0.87 9.49 23.62 0.22 -0.65 16 20 C 0.01 0.03 6.17 40.98 0.25 0.29 16 21 C -0.05 0.10 2.97 71.24 0.21 0.31 16 22 O -0.55 1.68 9.69 -148.98 -1.44 0.24 16 23 Si 0.77 -0.75 31.12 68.60 2.13 1.39 16 24 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 25 H 0.11 -0.38 5.13 -2.38 -0.01 -0.40 16 26 H 0.10 -0.90 8.13 -2.39 -0.02 -0.91 16 27 H 0.21 -2.00 7.45 -2.91 -0.02 -2.03 16 28 H 0.41 -2.76 7.64 -92.71 -0.71 -3.46 16 29 H 0.10 -0.65 6.64 -2.38 -0.02 -0.67 16 30 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.18 0.31 8.06 -2.91 -0.02 0.28 16 32 H 0.21 -1.58 8.06 -2.91 -0.02 -1.61 16 33 H 0.43 -3.20 7.53 -92.71 -0.70 -3.90 16 34 H 0.09 -0.37 8.14 -2.38 -0.02 -0.39 16 35 H 0.10 -0.31 8.10 -2.38 -0.02 -0.33 16 36 H 0.16 0.63 6.89 -2.91 -0.02 0.61 16 37 H 0.10 -0.64 7.96 -2.39 -0.02 -0.66 16 38 H 0.40 -4.29 8.74 -74.06 -0.65 -4.93 16 39 H -0.31 -2.78 7.11 99.48 0.71 -2.07 16 40 H -0.27 -0.31 7.11 99.48 0.71 0.39 16 Total: 0.00 -28.87 336.24 -0.34 -29.21 By element: Atomic # 1 Polarization: -20.21 SS G_CDS: -0.91 Total: -21.12 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: 7.14 Total: 10.12 kcal Atomic # 7 Polarization: -3.40 SS G_CDS: -7.20 Total: -10.59 kcal Atomic # 8 Polarization: -7.49 SS G_CDS: -1.51 Total: -9.01 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.13 Total: 1.39 kcal Total: -28.87 -0.34 -29.21 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13287730.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.588 kcal (2) G-P(sol) polarization free energy of solvation -28.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.213 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds