Wall clock time and date at job start Sun Mar 7 2021 12:29:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37782 * 119.84935 * 2 1 4 4 C 1.39713 * 119.90871 * 179.79256 * 3 2 1 5 5 C 1.47529 * 120.19230 * 180.25087 * 4 3 2 6 6 O 1.21593 * 119.99552 * 180.25089 * 5 4 3 7 7 N 1.34772 * 120.00099 * 0.25266 * 5 4 3 8 8 C 1.46507 * 119.99850 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.85029 * 25.33438 * 8 7 5 10 10 C 1.53776 * 113.61164 * 156.53129 * 8 7 5 11 11 C 1.53780 * 87.08398 * 89.11366 * 10 8 7 12 12 H 1.08993 * 113.61478 * 270.79983 * 11 10 8 13 13 C 1.50707 * 113.61370 * 139.97611 * 11 10 8 14 14 N 1.30494 * 125.64561 * 95.02789 * 13 11 10 15 15 C 1.34131 * 109.25369 * 179.97438 * 14 13 11 16 16 C 1.34665 * 108.02041 * 0.02562 * 15 14 13 17 17 N 1.35037 * 125.65212 * 274.72032 * 13 11 10 18 18 C 1.53783 * 113.61129 * 254.13734 * 8 7 5 19 19 C 1.40136 * 119.61175 * 0.50489 * 4 3 2 20 20 O 1.35659 * 120.14717 * 179.70469 * 19 4 3 21 21 C 1.38713 * 119.70260 * 359.72463 * 19 4 3 22 22 C 1.50698 * 119.95637 * 180.02562 * 21 19 4 23 23 O 1.42898 * 109.47502 * 75.02164 * 22 21 19 24 24 Si 1.86300 * 109.46802 * 195.02406 * 22 21 19 25 25 C 1.38049 * 120.08182 * 0.02562 * 21 19 4 26 26 H 1.09002 * 109.47152 * 269.72442 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.72543 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.72523 * 1 2 3 29 29 H 1.07999 * 120.05017 * 359.97438 * 3 2 1 30 30 H 0.96997 * 120.00401 * 359.97438 * 7 5 4 31 31 H 1.09004 * 113.61500 * 203.66489 * 10 8 7 32 32 H 1.09002 * 113.62069 * 334.47803 * 10 8 7 33 33 H 1.08004 * 125.98834 * 180.02562 * 15 14 13 34 34 H 1.08000 * 126.59140 * 180.02562 * 16 15 14 35 35 H 0.97003 * 126.39434 * 0.02562 * 17 13 11 36 36 H 1.08991 * 113.61692 * 25.43450 * 18 8 7 37 37 H 1.09006 * 113.60895 * 156.33909 * 18 8 7 38 38 H 0.96696 * 114.00159 * 270.01583 * 20 19 4 39 39 H 1.09001 * 109.46989 * 315.01938 * 22 21 19 40 40 H 0.96701 * 113.99523 * 59.99731 * 23 22 21 41 41 H 1.48507 * 109.99762 * 180.02562 * 24 22 21 42 42 H 1.48500 * 110.00038 * 301.31294 * 24 22 21 43 43 H 1.08006 * 119.80390 * 179.97438 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1965 0.0044 5 6 4.3305 2.4724 0.0100 6 8 5.5464 2.4695 0.0092 7 7 3.6594 3.6411 0.0160 8 6 4.3949 4.9082 0.0222 9 1 5.3924 4.8206 -0.4084 10 6 3.5861 6.0925 -0.5328 11 6 3.0803 6.3178 0.9019 12 1 2.1730 5.7616 1.1373 13 6 2.9931 7.7714 1.2899 14 7 1.9241 8.5160 1.2139 15 6 2.2154 9.7531 1.6428 16 6 3.5143 9.7760 1.9976 17 7 4.0066 8.5176 1.7794 18 6 4.3714 5.6274 1.3812 19 6 4.2837 -0.0211 -0.0020 20 8 5.6402 -0.0323 -0.0039 21 6 3.5770 -1.2147 -0.0068 22 6 4.3172 -2.5274 -0.0130 23 8 4.8554 -2.7771 1.2870 24 14 3.1442 -3.8995 -0.4736 25 6 2.1966 -1.2017 -0.0058 26 1 -0.3633 -0.0049 1.0277 27 1 -0.3633 -0.8875 -0.5181 28 1 -0.3633 0.8925 -0.5096 29 1 1.6512 2.1294 -0.0004 30 1 2.6894 3.6434 0.0163 31 1 4.2060 6.9059 -0.9100 32 1 2.8036 5.7976 -1.2319 33 1 1.5285 10.5850 1.6946 34 1 4.0610 10.6230 2.3848 35 1 4.9147 8.2183 1.9432 36 1 4.2214 4.9571 2.2275 37 1 5.2056 6.3139 1.5263 38 1 6.0323 -0.0314 -0.8877 39 1 5.1284 -2.4836 -0.7398 40 1 4.1885 -2.8288 1.9854 41 1 3.8619 -5.1996 -0.4828 42 1 2.0167 -3.9492 0.4915 43 1 1.6509 -2.1337 -0.0100 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:29:35 Heat of formation + Delta-G solvation = 7.312697 kcal Electronic energy + Delta-G solvation = -27649.791801 eV Core-core repulsion = 23663.704037 eV Total energy + Delta-G solvation = -3986.087764 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.10766 -41.82586 -40.64964 -39.09318 -38.02602 -37.74999 -34.70314 -33.45603 -33.05084 -32.63209 -30.51493 -27.53685 -26.84733 -26.83145 -26.52809 -24.88103 -22.62656 -22.04885 -21.75783 -21.63197 -20.51873 -19.62302 -19.08034 -18.38838 -17.96035 -17.46386 -16.82229 -16.78854 -16.26277 -16.04949 -15.90506 -15.77236 -15.51448 -15.48057 -14.97261 -14.87961 -14.57419 -14.47433 -14.40378 -14.17578 -13.61978 -13.56910 -13.42660 -13.36104 -12.88895 -12.53438 -12.50189 -12.24695 -11.93074 -11.82479 -11.71464 -11.51622 -11.05624 -11.04201 -11.02163 -10.54102 -10.29161 -10.03744 -9.49542 -9.35562 -4.94928 -0.34775 0.08682 1.08764 1.25364 1.55192 1.69388 1.91683 1.98719 2.11485 2.21708 2.55746 3.17728 3.26040 3.34303 3.36608 3.50342 3.56376 3.63165 3.75487 3.80002 4.05591 4.12444 4.20079 4.23189 4.37706 4.50392 4.52517 4.55668 4.58993 4.64120 4.64360 4.77501 4.82108 4.86635 4.89957 4.94242 4.98401 5.02664 5.14406 5.18969 5.26001 5.43755 5.47883 5.68859 5.78660 6.42513 6.46423 6.47039 6.75202 7.12209 7.13023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.094 4.094 3 C -0.060 4.060 4 C -0.180 4.180 5 C 0.560 3.440 6 O -0.560 6.560 7 N -0.697 5.697 8 C 0.124 3.876 9 H 0.095 0.905 10 C -0.119 4.119 11 C -0.021 4.021 12 H 0.123 0.877 13 C 0.209 3.791 14 N -0.529 5.529 15 C -0.062 4.062 16 C -0.046 4.046 17 N -0.559 5.559 18 C -0.143 4.143 19 C 0.166 3.834 20 O -0.491 6.491 21 C -0.154 4.154 22 C -0.083 4.083 23 O -0.547 6.547 24 Si 0.783 3.217 25 C -0.079 4.079 26 H 0.079 0.921 27 H 0.082 0.918 28 H 0.085 0.915 29 H 0.159 0.841 30 H 0.414 0.586 31 H 0.099 0.901 32 H 0.094 0.906 33 H 0.178 0.822 34 H 0.208 0.792 35 H 0.430 0.570 36 H 0.076 0.924 37 H 0.099 0.901 38 H 0.403 0.597 39 H 0.115 0.885 40 H 0.383 0.617 41 H -0.306 1.306 42 H -0.268 1.268 43 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.902 1.050 -2.930 5.807 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.094 4.094 3 C -0.078 4.078 4 C -0.184 4.184 5 C 0.349 3.651 6 O -0.439 6.439 7 N -0.350 5.350 8 C 0.018 3.982 9 H 0.113 0.887 10 C -0.158 4.158 11 C -0.041 4.041 12 H 0.141 0.859 13 C -0.055 4.055 14 N -0.249 5.249 15 C -0.209 4.209 16 C -0.180 4.180 17 N -0.163 5.163 18 C -0.183 4.183 19 C 0.119 3.881 20 O -0.304 6.304 21 C -0.155 4.155 22 C -0.191 4.191 23 O -0.355 6.355 24 Si 0.687 3.313 25 C -0.097 4.097 26 H 0.097 0.903 27 H 0.101 0.899 28 H 0.104 0.896 29 H 0.177 0.823 30 H 0.252 0.748 31 H 0.117 0.883 32 H 0.113 0.887 33 H 0.195 0.805 34 H 0.225 0.775 35 H 0.271 0.729 36 H 0.095 0.905 37 H 0.118 0.882 38 H 0.262 0.738 39 H 0.133 0.867 40 H 0.232 0.768 41 H -0.234 1.234 42 H -0.194 1.194 43 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -4.707 0.134 -2.693 5.425 hybrid contribution 1.355 0.639 1.323 1.998 sum -3.352 0.773 -1.371 3.703 Atomic orbital electron populations 1.20929 0.88170 1.04827 1.03573 1.20097 0.98022 0.91797 0.99523 1.21434 0.91031 0.99851 0.95534 1.20378 0.94973 0.92490 1.10528 1.18279 0.86887 0.84226 0.75710 1.90816 1.14862 1.87833 1.50384 1.45460 1.10717 1.04095 1.74703 1.21739 0.97013 0.82548 0.96883 0.88689 1.23312 1.00094 0.96834 0.95549 1.21169 1.00062 0.85512 0.97406 0.85922 1.23269 0.83852 0.96305 1.02081 1.70174 1.28088 1.04400 1.22258 1.22751 0.95977 0.95927 1.06278 1.23283 0.96742 0.89328 1.08642 1.43293 1.13648 1.09984 1.49420 1.23555 0.97041 0.99351 0.98322 1.18532 0.83529 0.90774 0.95222 1.84762 1.15363 1.96050 1.34193 1.20634 0.94552 0.95069 1.05231 1.25284 1.05920 0.99995 0.87907 1.86640 1.37987 1.93384 1.17461 0.94086 0.75498 0.73255 0.88475 1.21405 0.92273 0.99700 0.96332 0.90280 0.89893 0.89612 0.82331 0.74751 0.88251 0.88725 0.80480 0.77549 0.72871 0.90519 0.88239 0.73799 0.86714 0.76815 1.23397 1.19439 0.82988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.17 10.00 71.24 0.71 1.88 16 2 C -0.09 0.49 5.87 -19.90 -0.12 0.37 16 3 C -0.06 0.25 9.18 22.52 0.21 0.46 16 4 C -0.18 -0.42 5.89 -20.01 -0.12 -0.54 16 5 C 0.56 2.76 7.76 86.69 0.67 3.43 16 6 O -0.56 -7.42 14.78 16.91 0.25 -7.17 16 7 N -0.70 1.69 5.21 -443.20 -2.31 -0.62 16 8 C 0.12 -0.33 4.30 45.52 0.20 -0.13 16 9 H 0.10 0.10 7.50 -2.39 -0.02 0.08 16 10 C -0.12 0.60 7.37 31.12 0.23 0.83 16 11 C -0.02 0.07 4.18 -10.92 -0.05 0.02 16 12 H 0.12 -0.52 8.14 -2.39 -0.02 -0.54 16 13 C 0.21 0.46 7.37 138.13 1.02 1.47 16 14 N -0.53 -4.31 11.25 -188.13 -2.12 -6.42 16 15 C -0.06 -0.29 11.87 83.52 0.99 0.71 16 16 C -0.05 0.04 12.04 83.09 1.00 1.04 16 17 N -0.56 1.06 5.94 -186.28 -1.11 -0.05 16 18 C -0.14 0.58 7.37 31.22 0.23 0.81 16 19 C 0.17 0.82 6.69 22.84 0.15 0.97 16 20 O -0.49 -4.23 10.91 -68.83 -0.75 -4.98 16 21 C -0.15 -0.10 5.27 -19.80 -0.10 -0.21 16 22 C -0.08 -0.07 2.38 71.24 0.17 0.10 16 23 O -0.55 -3.24 12.88 -148.98 -1.92 -5.16 16 24 Si 0.78 -2.52 30.24 68.60 2.07 -0.45 16 25 C -0.08 0.28 8.30 22.30 0.19 0.47 16 26 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 27 H 0.08 -0.93 8.08 -2.39 -0.02 -0.95 16 28 H 0.09 -1.02 8.08 -2.38 -0.02 -1.04 16 29 H 0.16 -1.70 6.40 -2.91 -0.02 -1.71 16 30 H 0.41 -3.39 6.73 -92.71 -0.62 -4.02 16 31 H 0.10 -0.48 8.09 -2.38 -0.02 -0.50 16 32 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 33 H 0.18 0.21 8.06 -2.91 -0.02 0.18 16 34 H 0.21 -1.63 8.06 -2.91 -0.02 -1.65 16 35 H 0.43 -3.26 7.53 -92.71 -0.70 -3.96 16 36 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.10 -0.66 6.65 -2.38 -0.02 -0.67 16 38 H 0.40 0.67 9.06 -74.06 -0.67 0.00 16 39 H 0.11 0.02 7.83 -2.39 -0.02 0.00 16 40 H 0.38 -0.13 8.70 -74.06 -0.64 -0.77 16 41 H -0.31 -1.61 7.11 99.48 0.71 -0.90 16 42 H -0.27 0.45 6.68 99.48 0.66 1.12 16 43 H 0.15 -1.10 4.83 -2.91 -0.01 -1.11 16 Total: 0.00 -29.18 359.00 -2.03 -31.22 By element: Atomic # 1 Polarization: -16.50 SS G_CDS: -1.53 Total: -18.03 kcal Atomic # 6 Polarization: 6.30 SS G_CDS: 5.38 Total: 11.67 kcal Atomic # 7 Polarization: -1.56 SS G_CDS: -5.53 Total: -7.09 kcal Atomic # 8 Polarization: -14.90 SS G_CDS: -2.42 Total: -17.31 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.07 Total: -0.45 kcal Total: -29.18 -2.03 -31.22 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.528 kcal (2) G-P(sol) polarization free energy of solvation -29.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.215 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds