Wall clock time and date at job start Sun Mar 7 2021 12:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.46693 * 2 1 4 4 C 1.50702 * 109.47427 * 240.00668 * 2 1 3 5 5 C 1.32692 * 124.68052 * 299.99153 * 4 2 1 6 6 C 1.44506 * 113.09907 * 180.02562 * 5 4 2 7 7 C 1.47052 * 123.49216 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99953 * 179.97438 * 7 6 5 9 9 N 1.34776 * 119.99922 * 0.02562 * 7 6 5 10 10 C 1.46502 * 119.99929 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84922 * 23.80218 * 10 9 7 12 12 C 1.53775 * 113.61494 * 155.00343 * 10 9 7 13 13 C 1.53779 * 87.08594 * 89.19891 * 12 10 9 14 14 H 1.09003 * 113.61315 * 270.80648 * 13 12 10 15 15 C 1.50692 * 113.61511 * 139.97897 * 13 12 10 16 16 N 1.30501 * 125.64779 * 96.55653 * 15 13 12 17 17 C 1.34134 * 109.25535 * 179.97438 * 16 15 13 18 18 C 1.34668 * 108.01972 * 0.02562 * 17 16 15 19 19 N 1.35044 * 125.65329 * 276.55637 * 15 13 12 20 20 C 1.53786 * 87.16855 * 25.38837 * 13 12 10 21 21 C 1.36220 * 113.01426 * 0.23270 * 6 5 4 22 22 Cl 1.73602 * 124.60504 * 179.76625 * 21 6 5 23 23 S 1.70444 * 110.79087 * 359.64838 * 21 6 5 24 24 H 0.96688 * 114.00200 * 299.99344 * 1 2 3 25 25 H 1.09001 * 109.47522 * 119.99956 * 2 1 3 26 26 H 1.48504 * 110.00038 * 178.67878 * 3 2 1 27 27 H 1.48494 * 110.00456 * 299.99996 * 3 2 1 28 28 H 1.08003 * 123.45371 * 359.97438 * 5 4 2 29 29 H 0.96999 * 120.00210 * 0.02562 * 9 7 6 30 30 H 1.09003 * 113.61640 * 334.64972 * 12 10 9 31 31 H 1.08999 * 113.69076 * 203.76275 * 12 10 9 32 32 H 1.08001 * 125.98356 * 179.97438 * 17 16 15 33 33 H 1.08003 * 126.59021 * 180.02562 * 18 17 16 34 34 H 0.96995 * 126.39482 * 359.97438 * 19 15 13 35 35 H 1.09005 * 113.60996 * 89.16282 * 20 13 12 36 36 H 1.09004 * 113.61132 * 220.05639 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.6689 -1.9755 -1.5321 6 6 2.2780 -2.4011 -2.7714 7 6 2.1363 -3.7575 -3.3215 8 8 2.6770 -4.0474 -4.3720 9 7 1.4064 -4.6791 -2.6624 10 6 1.2657 -6.0305 -3.2101 11 1 2.0795 -6.3016 -3.8826 12 6 0.9648 -7.0985 -2.1454 13 6 -0.5252 -6.7949 -2.3750 14 1 -0.9118 -5.9991 -1.7383 15 6 -1.3987 -8.0228 -2.3726 16 7 -2.0765 -8.4721 -1.3519 17 6 -2.7383 -9.5812 -1.7140 18 6 -2.4597 -9.8289 -3.0080 19 7 -1.6099 -8.8406 -3.4263 20 6 -0.1330 -6.3206 -3.7843 21 6 3.0018 -1.4172 -3.3745 22 17 3.8623 -1.6024 -4.8708 23 16 2.9451 0.0214 -2.4621 24 1 -0.3933 0.4415 0.7650 25 1 1.7924 -0.5138 0.8900 26 1 3.5345 1.7705 0.0322 27 1 1.5614 2.4680 -1.2084 28 1 1.0627 -2.6214 -0.9141 29 1 0.9744 -4.4476 -1.8254 30 1 1.3160 -6.8322 -1.1484 31 1 1.2558 -8.1063 -2.4415 32 1 -3.3813 -10.1724 -1.0787 33 1 -2.8351 -10.6492 -3.6019 34 1 -1.2308 -8.7451 -4.3140 35 1 -0.1425 -7.1149 -4.5307 36 1 -0.6669 -5.4273 -4.1086 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:29:49 Heat of formation + Delta-G solvation = 58.615740 kcal Electronic energy + Delta-G solvation = -23890.759070 eV Core-core repulsion = 20110.468239 eV Total energy + Delta-G solvation = -3780.290832 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.043 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.08553 -41.34067 -39.71658 -38.66307 -37.87735 -37.06696 -34.45025 -33.38673 -31.86890 -30.58757 -27.17746 -26.96018 -26.74677 -25.19524 -22.58559 -22.16945 -21.72738 -20.85368 -20.51377 -19.38623 -18.93234 -18.60753 -17.85878 -17.13389 -16.61807 -16.34411 -15.99969 -15.86889 -15.58907 -15.47306 -15.13621 -14.74500 -14.58151 -14.47839 -14.40214 -14.34725 -14.22184 -13.68918 -13.45786 -13.05671 -12.59731 -12.50052 -12.42162 -12.21432 -11.99463 -11.94053 -11.60905 -10.95128 -10.94169 -10.86037 -10.61753 -10.20084 -9.89017 -9.71612 -9.32225 -5.42240 -0.62084 -0.18773 0.41144 0.66448 0.99226 1.07266 1.09431 1.41976 1.72444 2.00882 2.15207 2.19698 2.23007 3.05307 3.19938 3.29953 3.44775 3.50775 3.66776 3.82731 3.84813 3.96614 4.12864 4.13912 4.32330 4.42753 4.47752 4.49837 4.60692 4.66409 4.71900 4.77640 4.85244 4.88959 4.95662 5.16523 5.43741 5.82317 6.37165 6.37716 6.38757 7.14329 7.17281 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.034 4.034 3 Si 0.670 3.330 4 C -0.189 4.189 5 C -0.066 4.066 6 C -0.160 4.160 7 C 0.582 3.418 8 O -0.515 6.515 9 N -0.707 5.707 10 C 0.127 3.873 11 H 0.112 0.888 12 C -0.132 4.132 13 C -0.025 4.025 14 H 0.119 0.881 15 C 0.218 3.782 16 N -0.487 5.487 17 C -0.027 4.027 18 C -0.056 4.056 19 N -0.565 5.565 20 C -0.150 4.150 21 C -0.110 4.110 22 Cl 0.027 6.973 23 S 0.216 5.784 24 H 0.387 0.613 25 H 0.090 0.910 26 H -0.235 1.235 27 H -0.232 1.232 28 H 0.160 0.840 29 H 0.403 0.597 30 H 0.086 0.914 31 H 0.098 0.902 32 H 0.171 0.829 33 H 0.178 0.822 34 H 0.418 0.582 35 H 0.087 0.913 36 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.280 1.879 4.332 4.893 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.568 3.432 4 C -0.306 4.306 5 C -0.095 4.095 6 C -0.179 4.179 7 C 0.367 3.633 8 O -0.391 6.391 9 N -0.359 5.359 10 C 0.021 3.979 11 H 0.130 0.870 12 C -0.171 4.171 13 C -0.045 4.045 14 H 0.137 0.863 15 C -0.046 4.046 16 N -0.206 5.206 17 C -0.175 4.175 18 C -0.190 4.190 19 N -0.169 5.169 20 C -0.189 4.189 21 C -0.257 4.257 22 Cl 0.056 6.944 23 S 0.480 5.520 24 H 0.236 0.764 25 H 0.107 0.893 26 H -0.158 1.158 27 H -0.155 1.155 28 H 0.177 0.823 29 H 0.238 0.762 30 H 0.104 0.896 31 H 0.116 0.884 32 H 0.188 0.812 33 H 0.195 0.805 34 H 0.256 0.744 35 H 0.105 0.895 36 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 0.347 3.700 3.059 4.813 hybrid contribution -0.785 -2.395 -0.892 2.674 sum -0.438 1.305 2.167 2.567 Atomic orbital electron populations 1.86498 1.16480 1.81872 1.50023 1.23962 0.86139 1.09723 0.94909 0.94635 0.82159 0.78112 0.88245 1.23390 1.07586 0.97916 1.01712 1.20986 0.98896 0.95047 0.94580 1.20166 1.04710 0.95375 0.97599 1.17354 0.78489 0.83380 0.84032 1.90880 1.46554 1.79878 1.21801 1.45463 1.52939 1.10971 1.26531 1.21793 0.98107 0.81556 0.96456 0.87033 1.23399 0.93819 0.99536 1.00363 1.21078 0.92482 0.92150 0.98832 0.86276 1.22929 1.01735 0.96339 0.83605 1.70246 1.10817 1.11695 1.27876 1.22417 1.03935 0.97108 0.94068 1.22824 1.00700 0.97117 0.98320 1.43265 1.37890 1.22170 1.13569 1.23557 0.97370 1.02270 0.95707 1.25567 1.02788 1.00670 0.96651 1.98439 1.72921 1.96977 1.26014 1.83461 1.47094 1.09392 1.12015 0.76402 0.89258 1.15839 1.15503 0.82279 0.76166 0.89559 0.88398 0.81173 0.80480 0.74391 0.89463 0.89701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.18 12.82 -35.23 -0.45 0.73 16 2 C -0.03 0.08 2.94 36.01 0.11 0.19 16 3 Si 0.67 -1.86 30.91 -169.99 -5.25 -7.12 16 4 C -0.19 -0.05 5.71 -36.20 -0.21 -0.26 16 5 C -0.07 0.00 9.71 -39.00 -0.38 -0.38 16 6 C -0.16 -0.35 5.98 -104.58 -0.63 -0.98 16 7 C 0.58 1.59 7.79 -12.69 -0.10 1.49 16 8 O -0.52 -3.04 14.51 5.23 0.08 -2.97 16 9 N -0.71 0.39 5.24 -54.12 -0.28 0.11 16 10 C 0.13 -0.13 4.33 -67.03 -0.29 -0.42 16 11 H 0.11 0.03 7.46 -51.93 -0.39 -0.35 16 12 C -0.13 0.25 7.38 -25.92 -0.19 0.06 16 13 C -0.03 0.03 4.16 -90.96 -0.38 -0.35 16 14 H 0.12 -0.16 8.14 -51.93 -0.42 -0.58 16 15 C 0.22 0.31 7.36 -155.42 -1.14 -0.83 16 16 N -0.49 -2.01 11.25 -10.82 -0.12 -2.13 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.06 -0.01 12.04 -16.56 -0.20 -0.21 16 19 N -0.57 0.24 5.94 -10.23 -0.06 0.18 16 20 C -0.15 0.26 7.38 -25.83 -0.19 0.07 16 21 C -0.11 -0.33 6.87 30.01 0.21 -0.13 16 22 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.30 16 23 S 0.22 0.31 20.17 -107.50 -2.17 -1.86 16 24 H 0.39 -2.74 8.74 45.56 0.40 -2.34 16 25 H 0.09 -0.40 7.96 -51.93 -0.41 -0.81 16 26 H -0.23 0.16 7.11 56.52 0.40 0.56 16 27 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 28 H 0.16 -0.41 7.10 -52.48 -0.37 -0.78 16 29 H 0.40 -1.14 7.25 -40.82 -0.30 -1.43 16 30 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 32 H 0.17 0.06 8.06 -52.49 -0.42 -0.36 16 33 H 0.18 -0.52 8.06 -52.48 -0.42 -0.94 16 34 H 0.42 -1.31 7.54 -40.82 -0.31 -1.62 16 35 H 0.09 -0.26 6.64 -51.93 -0.34 -0.60 16 36 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 337.09 15.07 5.08 5.08 Total: 0.00 -10.29 337.09 -11.65 -21.94 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -3.46 Total: -10.64 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -3.60 Total: -2.02 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: -0.47 Total: -1.84 kcal Atomic # 8 Polarization: -1.86 SS G_CDS: -0.38 Total: -2.24 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.25 Total: -7.12 kcal Atomic # 16 Polarization: 0.31 SS G_CDS: -2.17 Total: -1.86 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.30 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -10.29 -11.65 -21.94 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.554 kcal (2) G-P(sol) polarization free energy of solvation -10.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.938 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds