Wall clock time and date at job start Sun Mar 7 2021 12:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.46693 * 2 1 4 4 C 1.50702 * 109.47427 * 240.00668 * 2 1 3 5 5 C 1.32692 * 124.68052 * 299.99153 * 4 2 1 6 6 C 1.44506 * 113.09907 * 180.02562 * 5 4 2 7 7 C 1.47052 * 123.49216 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99953 * 179.97438 * 7 6 5 9 9 N 1.34776 * 119.99922 * 0.02562 * 7 6 5 10 10 C 1.46502 * 119.99929 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84922 * 23.80218 * 10 9 7 12 12 C 1.53775 * 113.61494 * 155.00343 * 10 9 7 13 13 C 1.53779 * 87.08594 * 89.19891 * 12 10 9 14 14 H 1.09003 * 113.61315 * 270.80648 * 13 12 10 15 15 C 1.50692 * 113.61511 * 139.97897 * 13 12 10 16 16 N 1.30501 * 125.64779 * 96.55653 * 15 13 12 17 17 C 1.34134 * 109.25535 * 179.97438 * 16 15 13 18 18 C 1.34668 * 108.01972 * 0.02562 * 17 16 15 19 19 N 1.35044 * 125.65329 * 276.55637 * 15 13 12 20 20 C 1.53786 * 87.16855 * 25.38837 * 13 12 10 21 21 C 1.36220 * 113.01426 * 0.23270 * 6 5 4 22 22 Cl 1.73602 * 124.60504 * 179.76625 * 21 6 5 23 23 S 1.70444 * 110.79087 * 359.64838 * 21 6 5 24 24 H 0.96688 * 114.00200 * 299.99344 * 1 2 3 25 25 H 1.09001 * 109.47522 * 119.99956 * 2 1 3 26 26 H 1.48504 * 110.00038 * 178.67878 * 3 2 1 27 27 H 1.48494 * 110.00456 * 299.99996 * 3 2 1 28 28 H 1.08003 * 123.45371 * 359.97438 * 5 4 2 29 29 H 0.96999 * 120.00210 * 0.02562 * 9 7 6 30 30 H 1.09003 * 113.61640 * 334.64972 * 12 10 9 31 31 H 1.08999 * 113.69076 * 203.76275 * 12 10 9 32 32 H 1.08001 * 125.98356 * 179.97438 * 17 16 15 33 33 H 1.08003 * 126.59021 * 180.02562 * 18 17 16 34 34 H 0.96995 * 126.39482 * 359.97438 * 19 15 13 35 35 H 1.09005 * 113.60996 * 89.16282 * 20 13 12 36 36 H 1.09004 * 113.61132 * 220.05639 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.6689 -1.9755 -1.5321 6 6 2.2780 -2.4011 -2.7714 7 6 2.1363 -3.7575 -3.3215 8 8 2.6770 -4.0474 -4.3720 9 7 1.4064 -4.6791 -2.6624 10 6 1.2657 -6.0305 -3.2101 11 1 2.0795 -6.3016 -3.8826 12 6 0.9648 -7.0985 -2.1454 13 6 -0.5252 -6.7949 -2.3750 14 1 -0.9118 -5.9991 -1.7383 15 6 -1.3987 -8.0228 -2.3726 16 7 -2.0765 -8.4721 -1.3519 17 6 -2.7383 -9.5812 -1.7140 18 6 -2.4597 -9.8289 -3.0080 19 7 -1.6099 -8.8406 -3.4263 20 6 -0.1330 -6.3206 -3.7843 21 6 3.0018 -1.4172 -3.3745 22 17 3.8623 -1.6024 -4.8708 23 16 2.9451 0.0214 -2.4621 24 1 -0.3933 0.4415 0.7650 25 1 1.7924 -0.5138 0.8900 26 1 3.5345 1.7705 0.0322 27 1 1.5614 2.4680 -1.2084 28 1 1.0627 -2.6214 -0.9141 29 1 0.9744 -4.4476 -1.8254 30 1 1.3160 -6.8322 -1.1484 31 1 1.2558 -8.1063 -2.4415 32 1 -3.3813 -10.1724 -1.0787 33 1 -2.8351 -10.6492 -3.6019 34 1 -1.2308 -8.7451 -4.3140 35 1 -0.1425 -7.1149 -4.5307 36 1 -0.6669 -5.4273 -4.1086 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:29:49 Heat of formation + Delta-G solvation = 57.195070 kcal Electronic energy + Delta-G solvation = -23890.820675 eV Core-core repulsion = 20110.468239 eV Total energy + Delta-G solvation = -3780.352437 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.043 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.09856 -41.42234 -39.71164 -38.63562 -38.02940 -37.03346 -34.52879 -33.43337 -31.86491 -30.60062 -27.20718 -26.83874 -26.68528 -25.21624 -22.59624 -22.19299 -21.75644 -20.89513 -20.49683 -19.42679 -18.90846 -18.38941 -17.89917 -17.18811 -16.56154 -16.40507 -16.05443 -15.83376 -15.57758 -15.44030 -15.15703 -14.77644 -14.58136 -14.46558 -14.44484 -14.34530 -14.25629 -13.58716 -13.42383 -13.00788 -12.61918 -12.53783 -12.43485 -12.25869 -12.03374 -11.89657 -11.52798 -11.07011 -11.04003 -11.01264 -10.45140 -10.25798 -9.93234 -9.79698 -9.34553 -5.23006 -0.73940 -0.27396 0.35545 0.63968 0.91548 1.09582 1.19032 1.58580 1.89392 1.99536 2.06236 2.13067 2.22893 3.18048 3.28297 3.36797 3.55991 3.62469 3.77371 3.78529 3.90896 4.07387 4.23953 4.28955 4.45450 4.53092 4.55094 4.59738 4.64317 4.70919 4.78907 4.86383 4.89931 4.95031 5.02730 5.14965 5.45942 5.79515 6.36401 6.48228 6.88692 7.04879 7.13346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.034 4.034 3 Si 0.746 3.254 4 C -0.191 4.191 5 C -0.063 4.063 6 C -0.163 4.163 7 C 0.578 3.422 8 O -0.554 6.554 9 N -0.691 5.691 10 C 0.124 3.876 11 H 0.098 0.902 12 C -0.120 4.120 13 C -0.022 4.022 14 H 0.122 0.878 15 C 0.210 3.790 16 N -0.529 5.529 17 C -0.063 4.063 18 C -0.045 4.045 19 N -0.558 5.558 20 C -0.141 4.141 21 C -0.132 4.132 22 Cl 0.007 6.993 23 S 0.198 5.802 24 H 0.409 0.591 25 H 0.122 0.878 26 H -0.265 1.265 27 H -0.279 1.279 28 H 0.189 0.811 29 H 0.416 0.584 30 H 0.092 0.908 31 H 0.100 0.900 32 H 0.178 0.822 33 H 0.208 0.792 34 H 0.431 0.569 35 H 0.101 0.899 36 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.232 1.304 5.615 6.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.147 4.147 3 Si 0.649 3.351 4 C -0.308 4.308 5 C -0.091 4.091 6 C -0.182 4.182 7 C 0.364 3.636 8 O -0.433 6.433 9 N -0.343 5.343 10 C 0.018 3.982 11 H 0.116 0.884 12 C -0.159 4.159 13 C -0.042 4.042 14 H 0.140 0.860 15 C -0.054 4.054 16 N -0.250 5.250 17 C -0.210 4.210 18 C -0.180 4.180 19 N -0.163 5.163 20 C -0.181 4.181 21 C -0.278 4.278 22 Cl 0.036 6.964 23 S 0.463 5.537 24 H 0.262 0.738 25 H 0.140 0.860 26 H -0.191 1.191 27 H -0.205 1.205 28 H 0.206 0.794 29 H 0.254 0.746 30 H 0.111 0.889 31 H 0.118 0.882 32 H 0.195 0.805 33 H 0.225 0.775 34 H 0.271 0.729 35 H 0.119 0.881 36 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -0.637 3.120 4.389 5.422 hybrid contribution -0.539 -2.182 -1.265 2.579 sum -1.175 0.938 3.124 3.467 Atomic orbital electron populations 1.86449 1.16162 1.82388 1.51805 1.24025 0.86497 1.09496 0.94666 0.93834 0.79212 0.76343 0.85661 1.23771 1.06906 0.98075 1.01997 1.21220 0.98731 0.95343 0.93819 1.20388 1.04523 0.94983 0.98347 1.17528 0.78433 0.83944 0.83737 1.90858 1.48355 1.80556 1.23532 1.45358 1.51738 1.10638 1.26550 1.21805 0.98127 0.81400 0.96839 0.88383 1.23327 0.93059 0.99203 1.00324 1.21124 0.92428 0.91453 0.99212 0.85977 1.23257 1.01636 0.96931 0.83625 1.70180 1.12257 1.12948 1.29584 1.22750 1.05129 0.97559 0.95515 1.23281 0.99551 0.97297 0.97845 1.43282 1.37477 1.21637 1.13917 1.23535 0.96339 1.02411 0.95778 1.25764 1.03754 1.01749 0.96509 1.98418 1.73499 1.97141 1.27373 1.83545 1.47923 1.09456 1.12819 0.73839 0.86024 1.19063 1.20489 0.79381 0.74642 0.88892 0.88170 0.80502 0.77537 0.72851 0.88109 0.90296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.68 12.82 -148.98 -1.91 1.77 16 2 C -0.03 0.22 2.94 71.24 0.21 0.43 16 3 Si 0.75 -4.45 30.91 68.60 2.12 -2.33 16 4 C -0.19 0.04 5.71 24.52 0.14 0.18 16 5 C -0.06 0.06 9.71 22.70 0.22 0.28 16 6 C -0.16 -0.79 5.98 -19.84 -0.12 -0.90 16 7 C 0.58 3.50 7.79 86.55 0.67 4.18 16 8 O -0.55 -7.39 14.51 -4.20 -0.06 -7.45 16 9 N -0.69 1.01 5.24 -443.38 -2.32 -1.31 16 10 C 0.12 -0.29 4.33 45.57 0.20 -0.09 16 11 H 0.10 0.11 7.46 -2.39 -0.02 0.10 16 12 C -0.12 0.55 7.38 31.12 0.23 0.78 16 13 C -0.02 0.06 4.16 -11.02 -0.05 0.02 16 14 H 0.12 -0.43 8.14 -2.39 -0.02 -0.45 16 15 C 0.21 0.51 7.36 138.12 1.02 1.53 16 16 N -0.53 -4.49 11.25 -188.13 -2.12 -6.61 16 17 C -0.06 -0.30 11.87 83.52 0.99 0.69 16 18 C -0.05 0.03 12.04 83.09 1.00 1.03 16 19 N -0.56 1.01 5.94 -186.28 -1.11 -0.10 16 20 C -0.14 0.58 7.38 31.18 0.23 0.81 16 21 C -0.13 -0.98 6.87 67.35 0.46 -0.51 16 22 Cl 0.01 0.07 27.20 -2.72 -0.07 -0.01 16 23 S 0.20 0.77 20.17 -56.49 -1.14 -0.37 16 24 H 0.41 -6.85 8.74 -74.07 -0.65 -7.50 16 25 H 0.12 -1.49 7.96 -2.39 -0.02 -1.51 16 26 H -0.27 0.26 7.11 99.48 0.71 0.97 16 27 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 28 H 0.19 -1.43 7.10 -2.91 -0.02 -1.45 16 29 H 0.42 -2.86 7.25 -92.71 -0.67 -3.54 16 30 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 31 H 0.10 -0.45 8.09 -2.39 -0.02 -0.47 16 32 H 0.18 0.25 8.06 -2.91 -0.02 0.23 16 33 H 0.21 -1.61 8.06 -2.91 -0.02 -1.63 16 34 H 0.43 -3.28 7.54 -92.71 -0.70 -3.98 16 35 H 0.10 -0.70 6.64 -2.38 -0.02 -0.71 16 36 H 0.08 -0.18 8.14 -2.38 -0.02 -0.20 16 Total: 0.00 -26.26 337.09 -2.21 -28.47 By element: Atomic # 1 Polarization: -19.68 SS G_CDS: -0.80 Total: -20.48 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: 5.21 Total: 8.42 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -5.55 Total: -8.01 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -1.97 Total: -5.69 kcal Atomic # 14 Polarization: -4.45 SS G_CDS: 2.12 Total: -2.33 kcal Atomic # 16 Polarization: 0.77 SS G_CDS: -1.14 Total: -0.37 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: -0.01 kcal Total: -26.26 -2.21 -28.47 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.663 kcal (2) G-P(sol) polarization free energy of solvation -26.258 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.467 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds