Wall clock time and date at job start Sun Mar 7 2021 12:30:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47283 * 2 1 4 4 C 1.50703 * 109.47154 * 120.00113 * 2 1 3 5 5 C 1.38269 * 119.94058 * 65.00082 * 4 2 1 6 6 C 1.38138 * 120.05201 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94637 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05457 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99431 * 180.02562 * 8 7 6 10 10 C 1.53007 * 109.46776 * 180.02562 * 9 8 7 11 11 C 1.50698 * 109.47040 * 179.97438 * 10 9 8 12 12 O 1.21285 * 120.00148 * 359.97438 * 11 10 9 13 13 N 1.34784 * 119.99866 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99758 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.85032 * 336.19438 * 14 13 11 16 16 C 1.53782 * 113.68971 * 107.45966 * 14 13 11 17 17 C 1.53962 * 87.11063 * 89.19569 * 16 14 13 18 18 H 1.08993 * 113.61598 * 270.84305 * 17 16 14 19 19 C 1.50700 * 113.66521 * 139.88647 * 17 16 14 20 20 N 1.30496 * 125.64738 * 167.24071 * 19 17 16 21 21 C 1.34130 * 109.25678 * 179.89738 * 20 19 17 22 22 C 1.34668 * 108.01900 * 0.36991 * 21 20 19 23 23 N 1.35041 * 125.65058 * 347.55552 * 19 17 16 24 24 C 1.53781 * 113.61266 * 204.99541 * 14 13 11 25 25 C 1.38728 * 119.88427 * 0.27329 * 7 6 5 26 26 C 1.38142 * 119.94991 * 359.46964 * 25 7 6 27 27 H 0.96699 * 113.99872 * 300.00170 * 1 2 3 28 28 H 1.09006 * 109.47089 * 240.00359 * 2 1 3 29 29 H 1.48499 * 110.00057 * 178.67844 * 3 2 1 30 30 H 1.48504 * 110.00129 * 300.00249 * 3 2 1 31 31 H 1.08000 * 119.97430 * 359.97438 * 5 4 2 32 32 H 1.08002 * 120.02671 * 180.02562 * 6 5 4 33 33 H 1.08993 * 109.47724 * 60.00315 * 9 8 7 34 34 H 1.09008 * 109.47126 * 299.99383 * 9 8 7 35 35 H 1.09006 * 109.46863 * 60.00019 * 10 9 8 36 36 H 1.09000 * 109.47210 * 299.99943 * 10 9 8 37 37 H 0.97001 * 119.99554 * 359.97438 * 13 11 10 38 38 H 1.08997 * 113.61668 * 203.67120 * 16 14 13 39 39 H 1.08994 * 113.61387 * 334.57855 * 16 14 13 40 40 H 1.07995 * 125.99250 * 180.11867 * 21 20 19 41 41 H 1.07999 * 126.59092 * 179.74354 * 22 21 20 42 42 H 0.97002 * 126.40293 * 359.93854 * 23 19 17 43 43 H 1.09002 * 113.61445 * 25.35018 * 24 14 13 44 44 H 1.09002 * 113.61408 * 156.16749 * 24 14 13 45 45 H 1.08010 * 120.02370 * 179.72160 * 25 7 6 46 46 H 1.07994 * 119.97610 * 180.23350 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6840 -2.0606 1.3971 6 6 2.1439 -2.7142 2.5239 7 6 2.8539 -2.0147 3.4889 8 8 3.3069 -2.6555 4.5985 9 6 4.0300 -1.8721 5.5501 10 6 4.4564 -2.7589 6.7218 11 6 5.2194 -1.9329 7.7251 12 8 5.4045 -0.7515 7.5227 13 7 5.6972 -2.5074 8.8469 14 6 6.4394 -1.7046 9.8219 15 1 6.8929 -0.8166 9.3815 16 6 5.6544 -1.4194 11.1131 17 6 6.2425 -2.7297 11.6677 18 1 5.6352 -3.6079 11.4488 19 6 6.6501 -2.6445 13.1161 20 7 6.9502 -3.6571 13.8825 21 6 7.2667 -3.2074 15.1059 22 6 7.1508 -1.8657 15.0994 23 7 6.7595 -1.5081 13.8374 24 6 7.4092 -2.5273 10.6865 25 6 3.0954 -0.6588 3.3222 26 6 2.6380 -0.0109 2.1911 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8901 29 1 3.5346 1.7702 0.0322 30 1 1.5615 2.4679 -1.2085 31 1 1.1309 -2.6046 0.6458 32 1 1.9508 -3.7689 2.6534 33 1 3.3935 -1.0667 5.9164 34 1 4.9148 -1.4486 5.0747 35 1 5.0931 -3.5641 6.3552 36 1 3.5719 -3.1828 7.1973 37 1 5.5494 -3.4524 9.0086 38 1 5.9950 -0.5304 11.6439 39 1 4.5727 -1.4465 10.9815 40 1 7.5591 -3.8150 15.9495 41 1 7.3311 -1.1999 15.9304 42 1 6.5925 -0.6067 13.5203 43 1 7.7442 -3.4489 10.2105 44 1 8.2304 -1.9415 11.0995 45 1 3.6440 -0.1111 4.0742 46 1 2.8290 1.0438 2.0591 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:30:20 Heat of formation + Delta-G solvation = 8.432198 kcal Electronic energy + Delta-G solvation = -27938.550335 eV Core-core repulsion = 23796.973498 eV Total energy + Delta-G solvation = -4141.576838 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.09634 -41.46054 -41.06501 -39.50212 -38.99541 -37.16434 -34.57947 -33.45889 -33.23942 -32.03234 -31.43526 -30.50548 -26.95006 -26.81118 -26.19264 -25.29352 -23.57820 -22.58966 -22.22797 -21.77188 -21.53885 -20.46405 -19.54938 -19.01593 -18.31598 -17.71240 -17.46445 -17.19649 -16.89863 -16.46443 -16.24111 -16.06846 -15.86060 -15.65426 -15.53457 -15.40417 -14.84123 -14.68936 -14.58961 -14.49731 -14.32211 -14.27985 -14.08569 -13.59247 -13.53690 -13.39775 -12.85516 -12.82578 -12.48564 -12.20816 -12.03812 -11.87823 -11.76411 -11.70854 -11.50902 -11.07986 -11.04410 -11.01289 -10.41323 -10.16079 -10.04240 -9.35017 -9.21361 -5.01337 0.28424 0.30648 1.09320 1.32151 1.50406 1.62434 1.68445 1.95134 2.12143 2.20696 2.47108 2.66064 3.28947 3.38581 3.54592 3.57179 3.60110 3.72642 3.78729 3.84060 3.89278 3.93403 4.02508 4.10182 4.24472 4.26724 4.34976 4.44857 4.50097 4.53155 4.56910 4.61045 4.65237 4.66509 4.71050 4.78984 4.82439 4.88391 4.96227 4.97777 5.05565 5.15106 5.18165 5.28743 5.49750 5.50639 5.72196 5.78973 6.32839 6.44833 6.48624 6.78549 7.13178 7.14404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.769 3.231 4 C -0.163 4.163 5 C -0.061 4.061 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.322 6.322 9 C 0.072 3.928 10 C -0.134 4.134 11 C 0.525 3.475 12 O -0.579 6.579 13 N -0.700 5.700 14 C 0.123 3.877 15 H 0.096 0.904 16 C -0.140 4.140 17 C -0.024 4.024 18 H 0.123 0.877 19 C 0.209 3.791 20 N -0.531 5.531 21 C -0.064 4.064 22 C -0.045 4.045 23 N -0.558 5.558 24 C -0.123 4.123 25 C -0.209 4.209 26 C -0.078 4.078 27 H 0.395 0.605 28 H 0.106 0.894 29 H -0.289 1.289 30 H -0.298 1.298 31 H 0.138 0.862 32 H 0.141 0.859 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.126 0.874 36 H 0.128 0.872 37 H 0.419 0.581 38 H 0.098 0.902 39 H 0.083 0.917 40 H 0.177 0.823 41 H 0.208 0.792 42 H 0.431 0.569 43 H 0.090 0.910 44 H 0.096 0.904 45 H 0.142 0.858 46 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.192 1.593 4.409 4.692 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.177 4.177 3 Si 0.676 3.324 4 C -0.163 4.163 5 C -0.079 4.079 6 C -0.178 4.178 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.173 4.173 11 C 0.313 3.687 12 O -0.459 6.459 13 N -0.352 5.352 14 C 0.018 3.982 15 H 0.114 0.886 16 C -0.179 4.179 17 C -0.044 4.044 18 H 0.141 0.859 19 C -0.056 4.056 20 N -0.251 5.251 21 C -0.210 4.210 22 C -0.179 4.179 23 N -0.163 5.163 24 C -0.162 4.162 25 C -0.227 4.227 26 C -0.095 4.095 27 H 0.245 0.755 28 H 0.124 0.876 29 H -0.216 1.216 30 H -0.226 1.226 31 H 0.156 0.844 32 H 0.159 0.841 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.144 0.856 36 H 0.146 0.854 37 H 0.257 0.743 38 H 0.116 0.884 39 H 0.101 0.899 40 H 0.194 0.806 41 H 0.225 0.775 42 H 0.272 0.728 43 H 0.109 0.891 44 H 0.114 0.886 45 H 0.160 0.840 46 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.497 1.640 3.187 3.619 hybrid contribution 0.234 0.280 0.314 0.482 sum 0.731 1.921 3.501 4.060 Atomic orbital electron populations 1.86461 1.17310 1.82161 1.50480 1.25052 0.85187 1.10379 0.97042 0.93818 0.77820 0.75876 0.84909 1.20326 1.02764 0.95266 0.97987 1.20975 0.96694 0.93786 0.96428 1.20665 1.01855 1.01347 0.93929 1.19175 0.94527 0.91380 0.87113 1.85962 1.69274 1.38884 1.29428 1.22479 0.95860 0.93700 0.88337 1.21447 1.03101 0.99176 0.93623 1.20600 0.78407 0.87509 0.82201 1.90743 1.59517 1.17953 1.77639 1.45544 1.55689 1.13993 1.19940 1.21716 0.92958 0.95433 0.88142 0.88582 1.23522 1.01584 0.96774 0.96061 1.21175 0.98769 1.00706 0.83710 0.85901 1.23322 1.04248 0.81492 0.96512 1.70176 1.19415 1.31622 1.03934 1.22739 1.08234 0.93803 0.96270 1.23280 1.07583 0.97881 0.89196 1.43278 1.52086 1.10635 1.10271 1.23327 0.96401 1.01551 0.94959 1.21432 1.06403 0.93849 1.01043 1.20991 0.95987 0.99887 0.92682 0.75547 0.87642 1.21631 1.22647 0.84411 0.84129 0.91250 0.91680 0.85590 0.85382 0.74298 0.88361 0.89861 0.80624 0.77520 0.72794 0.89128 0.88596 0.84001 0.83665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.56 12.83 -148.98 -1.91 -2.47 16 2 C -0.07 -0.03 2.80 71.24 0.20 0.17 16 3 Si 0.77 -0.75 29.80 68.60 2.04 1.29 16 4 C -0.16 -0.23 5.35 -19.85 -0.11 -0.33 16 5 C -0.06 -0.13 9.68 22.25 0.22 0.08 16 6 C -0.16 -0.43 9.99 22.36 0.22 -0.21 16 7 C 0.12 0.42 6.69 22.51 0.15 0.57 16 8 O -0.32 -0.70 10.14 -92.46 -0.94 -1.64 16 9 C 0.07 -0.07 4.03 71.98 0.29 0.22 16 10 C -0.13 0.85 6.07 29.85 0.18 1.03 16 11 C 0.53 -1.15 7.83 87.66 0.69 -0.47 16 12 O -0.58 -3.73 15.58 -3.05 -0.05 -3.78 16 13 N -0.70 4.86 5.27 -440.03 -2.32 2.54 16 14 C 0.12 -0.69 4.32 45.52 0.20 -0.50 16 15 H 0.10 -0.19 7.46 -2.39 -0.02 -0.21 16 16 C -0.14 0.98 7.37 31.18 0.23 1.21 16 17 C -0.02 0.11 4.18 -10.95 -0.05 0.07 16 18 H 0.12 -0.69 8.14 -2.39 -0.02 -0.70 16 19 C 0.21 0.27 7.36 138.13 1.02 1.29 16 20 N -0.53 -4.12 11.25 -188.14 -2.12 -6.24 16 21 C -0.06 -0.27 11.87 83.52 0.99 0.72 16 22 C -0.05 0.07 12.04 83.09 1.00 1.07 16 23 N -0.56 1.67 5.94 -186.27 -1.11 0.57 16 24 C -0.12 0.77 7.37 31.12 0.23 1.00 16 25 C -0.21 -0.38 9.04 22.36 0.20 -0.18 16 26 C -0.08 -0.03 8.66 22.25 0.19 0.16 16 27 H 0.39 -2.73 8.70 -74.06 -0.64 -3.37 16 28 H 0.11 0.16 7.96 -2.38 -0.02 0.14 16 29 H -0.29 -1.21 7.11 99.48 0.71 -0.50 16 30 H -0.30 -1.89 7.11 99.48 0.71 -1.19 16 31 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 32 H 0.14 0.05 8.06 -2.91 -0.02 0.02 16 33 H 0.07 -0.02 7.61 -2.39 -0.02 -0.04 16 34 H 0.06 0.03 7.63 -2.38 -0.02 0.01 16 35 H 0.13 -1.20 8.14 -2.38 -0.02 -1.22 16 36 H 0.13 -1.27 8.14 -2.39 -0.02 -1.29 16 37 H 0.42 -5.12 8.71 -92.71 -0.81 -5.92 16 38 H 0.10 -0.91 6.64 -2.39 -0.02 -0.93 16 39 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 40 H 0.18 0.18 8.06 -2.91 -0.02 0.16 16 41 H 0.21 -1.79 8.06 -2.91 -0.02 -1.81 16 42 H 0.43 -3.91 7.53 -92.71 -0.70 -4.60 16 43 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 44 H 0.10 -0.53 8.09 -2.39 -0.02 -0.55 16 45 H 0.14 -0.05 6.30 -2.91 -0.02 -0.07 16 46 H 0.15 -0.57 4.90 -2.91 -0.01 -0.58 16 Total: 0.00 -26.01 384.14 -1.61 -27.61 By element: Atomic # 1 Polarization: -22.72 SS G_CDS: -1.07 Total: -23.79 kcal Atomic # 6 Polarization: 0.06 SS G_CDS: 5.85 Total: 5.91 kcal Atomic # 7 Polarization: 2.41 SS G_CDS: -5.54 Total: -3.13 kcal Atomic # 8 Polarization: -5.00 SS G_CDS: -2.90 Total: -7.89 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.04 Total: 1.29 kcal Total: -26.01 -1.61 -27.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.046 kcal (2) G-P(sol) polarization free energy of solvation -26.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.614 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds