Wall clock time and date at job start Sun Mar 7 2021 12:30:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47079 * 2 1 4 4 C 1.50706 * 109.47265 * 239.99678 * 2 1 3 5 5 C 1.38242 * 119.96957 * 119.99705 * 4 2 1 6 6 C 1.38286 * 120.11000 * 180.02562 * 5 4 2 7 7 C 1.38123 * 120.05554 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94626 * 359.97419 * 7 6 5 9 9 O 1.35897 * 120.05803 * 180.02562 * 8 7 6 10 10 C 1.42905 * 117.00144 * 359.97438 * 9 8 7 11 11 C 1.52997 * 109.47233 * 180.02562 * 10 9 8 12 12 C 1.50703 * 109.46815 * 179.97438 * 11 10 9 13 13 O 1.21277 * 119.99948 * 0.02562 * 12 11 10 14 14 N 1.34779 * 119.99369 * 180.02562 * 12 11 10 15 15 C 1.46496 * 119.99390 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.91246 * 23.74616 * 15 14 12 17 17 C 1.53786 * 113.61518 * 154.99856 * 15 14 12 18 18 C 1.53781 * 87.17350 * 89.15486 * 17 15 14 19 19 H 1.08996 * 113.61580 * 270.76247 * 18 17 15 20 20 C 1.50703 * 113.61417 * 139.93966 * 18 17 15 21 21 N 1.30499 * 125.64807 * 95.02325 * 20 18 17 22 22 C 1.34129 * 109.25733 * 180.02562 * 21 20 18 23 23 C 1.34675 * 108.01514 * 0.02562 * 22 21 20 24 24 N 1.35038 * 125.64888 * 274.71981 * 20 18 17 25 25 C 1.53782 * 87.08260 * 25.39213 * 18 17 15 26 26 C 1.38168 * 119.97148 * 300.25626 * 4 2 1 27 27 H 0.96702 * 113.99761 * 60.00427 * 1 2 3 28 28 H 1.08998 * 109.47026 * 120.00033 * 2 1 3 29 29 H 1.48497 * 109.99787 * 298.67953 * 3 2 1 30 30 H 1.48495 * 109.99755 * 59.99934 * 3 2 1 31 31 H 1.08005 * 119.94528 * 0.02562 * 5 4 2 32 32 H 1.08003 * 119.97475 * 179.97438 * 6 5 4 33 33 H 1.08000 * 120.02521 * 179.97438 * 7 6 5 34 34 H 1.08994 * 109.46823 * 59.99768 * 10 9 8 35 35 H 1.09005 * 109.46511 * 300.00390 * 10 9 8 36 36 H 1.09002 * 109.47170 * 59.99934 * 11 10 9 37 37 H 1.09002 * 109.46995 * 300.00012 * 11 10 9 38 38 H 0.97001 * 120.00492 * 359.97438 * 14 12 11 39 39 H 1.09002 * 113.61357 * 334.56403 * 17 15 14 40 40 H 1.09002 * 113.61608 * 203.74565 * 17 15 14 41 41 H 1.07990 * 125.99524 * 180.02562 * 22 21 20 42 42 H 1.08002 * 126.58465 * 180.02562 * 23 22 21 43 43 H 0.97003 * 126.40226 * 359.97438 * 24 20 18 44 44 H 1.08997 * 113.61668 * 89.11298 * 25 18 17 45 45 H 1.08998 * 113.61674 * 219.93807 * 25 18 17 46 46 H 1.08003 * 120.03056 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.7261 -0.0381 -2.1401 6 6 3.1882 -0.6870 -3.2704 7 6 2.8562 -2.0091 -3.4934 8 6 2.0588 -2.6862 -2.5820 9 8 1.7311 -3.9871 -2.7989 10 6 2.2422 -4.5955 -3.9867 11 6 1.7709 -6.0493 -4.0584 12 6 2.3093 -6.6906 -5.3114 13 8 3.0021 -6.0483 -6.0718 14 7 2.0208 -7.9781 -5.5868 15 6 2.5447 -8.6016 -6.8046 16 1 3.4433 -8.1116 -7.1794 17 6 2.6720 -10.1312 -6.7077 18 6 1.2270 -10.2081 -7.2284 19 1 0.4764 -10.1855 -6.4384 20 6 1.0008 -11.3210 -8.2190 21 7 0.5471 -12.5113 -7.9352 22 6 0.4756 -13.2374 -9.0607 23 6 0.9017 -12.4679 -10.0806 24 7 1.2285 -11.2500 -9.5482 25 6 1.4741 -8.8397 -7.8851 26 6 1.5929 -2.0318 -1.4511 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5879 2.4585 -1.2242 30 1 1.5614 2.4678 1.2085 31 1 2.9864 0.9958 -1.9677 32 1 3.8086 -0.1595 -3.9798 33 1 3.2171 -2.5153 -4.3765 34 1 3.3316 -4.5667 -3.9698 35 1 1.8778 -4.0523 -4.8587 36 1 0.6814 -6.0777 -4.0755 37 1 2.1349 -6.5927 -3.1864 38 1 1.4670 -8.4919 -4.9784 39 1 2.7883 -10.4959 -5.6871 40 1 3.4064 -10.5525 -7.3941 41 1 0.1360 -14.2597 -9.1360 42 1 0.9672 -12.7548 -11.1197 43 1 1.5639 -10.4805 -10.0344 44 1 1.8813 -8.9066 -8.8939 45 1 0.6230 -8.1622 -7.8163 46 1 0.9689 -2.5556 -0.7421 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 12:30:25 Heat of formation + Delta-G solvation = 10.420724 kcal Electronic energy + Delta-G solvation = -27982.617379 eV Core-core repulsion = 23841.126770 eV Total energy + Delta-G solvation = -4141.490609 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.13740 -41.50874 -41.10951 -39.58419 -38.99623 -37.33167 -34.67586 -33.46080 -33.26249 -32.44228 -30.94871 -30.46264 -27.15040 -27.03414 -26.54599 -25.15599 -23.64654 -22.69441 -22.19253 -21.81061 -21.55362 -20.59900 -19.43531 -19.09941 -18.20307 -17.73639 -17.52688 -17.23941 -17.11196 -16.82951 -16.34058 -16.20341 -16.00706 -15.65899 -15.63229 -15.39083 -14.96286 -14.84010 -14.63799 -14.53618 -14.33293 -14.18505 -14.05501 -13.75072 -13.53433 -13.22136 -12.96419 -12.85626 -12.64983 -12.38718 -12.05243 -11.92882 -11.83458 -11.70056 -11.54626 -11.11092 -10.99552 -10.98922 -10.64353 -10.30798 -9.89247 -9.37149 -9.22177 -4.93836 0.24048 0.43770 1.04403 1.28022 1.40260 1.58433 1.62342 1.97317 2.07787 2.15825 2.38128 2.70128 3.11775 3.22337 3.37735 3.39043 3.45484 3.58757 3.63861 3.78238 3.79793 3.88514 3.90820 4.06885 4.08205 4.22438 4.26141 4.33747 4.35590 4.39320 4.45171 4.53645 4.54635 4.55546 4.59127 4.62712 4.68756 4.71138 4.78419 4.87952 5.00281 5.11270 5.29243 5.32156 5.40639 5.46958 5.70764 5.77814 6.22502 6.33789 6.38804 6.41098 6.98284 7.12506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.689 3.311 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.525 3.475 13 O -0.535 6.535 14 N -0.712 5.712 15 C 0.123 3.877 16 H 0.111 0.889 17 C -0.132 4.132 18 C -0.025 4.025 19 H 0.120 0.880 20 C 0.216 3.784 21 N -0.486 5.486 22 C -0.027 4.027 23 C -0.055 4.055 24 N -0.565 5.565 25 C -0.150 4.150 26 C -0.126 4.126 27 H 0.376 0.624 28 H 0.120 0.880 29 H -0.260 1.260 30 H -0.257 1.257 31 H 0.129 0.871 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.109 0.891 37 H 0.110 0.890 38 H 0.406 0.594 39 H 0.086 0.914 40 H 0.097 0.903 41 H 0.171 0.829 42 H 0.178 0.822 43 H 0.418 0.582 44 H 0.087 0.913 45 H 0.084 0.916 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.278 -0.423 -2.460 3.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.312 3.688 13 O -0.412 6.412 14 N -0.363 5.363 15 C 0.018 3.982 16 H 0.129 0.871 17 C -0.171 4.171 18 C -0.045 4.045 19 H 0.137 0.863 20 C -0.048 4.048 21 N -0.206 5.206 22 C -0.175 4.175 23 C -0.189 4.189 24 N -0.169 5.169 25 C -0.189 4.189 26 C -0.144 4.144 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.185 1.185 30 H -0.182 1.182 31 H 0.146 0.854 32 H 0.148 0.852 33 H 0.150 0.850 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.127 0.873 37 H 0.128 0.872 38 H 0.241 0.759 39 H 0.105 0.895 40 H 0.116 0.884 41 H 0.189 0.811 42 H 0.196 0.804 43 H 0.256 0.744 44 H 0.105 0.895 45 H 0.102 0.898 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.292 0.098 -1.557 2.773 hybrid contribution -0.926 -0.103 -1.778 2.007 sum 1.366 -0.005 -3.335 3.604 Atomic orbital electron populations 1.86605 1.17571 1.80003 1.49305 1.25080 0.84066 1.11091 0.98321 0.94892 0.91749 0.74198 0.80194 1.20076 0.97651 0.93856 0.96534 1.20928 1.00823 1.00009 0.95459 1.20928 0.97831 0.93699 0.96675 1.21394 1.03125 0.96500 1.01067 1.18953 0.94662 0.83177 0.94507 1.85977 1.71199 1.22784 1.43023 1.22411 0.99389 0.92034 0.86283 1.21473 1.04014 0.95475 0.97230 1.20320 0.79916 0.81674 0.86926 1.90755 1.37852 1.62412 1.50151 1.45624 1.53867 1.12239 1.24616 1.21818 0.97650 0.93594 0.85169 0.87123 1.23395 0.95871 0.94447 1.03387 1.21067 0.98809 0.89116 0.95520 0.86250 1.22925 1.03201 0.95754 0.82911 1.70243 1.18697 1.02328 1.29309 1.22423 1.06052 1.00849 0.88160 1.22836 1.09021 0.86194 1.00855 1.43266 1.51241 1.13651 1.08747 1.23546 1.00416 0.96084 0.98848 1.20242 1.03078 0.93991 0.97106 0.77602 0.86190 1.18500 1.18219 0.85396 0.85160 0.84986 0.90842 0.90964 0.87314 0.87226 0.75866 0.89517 0.88418 0.81147 0.80445 0.74399 0.89473 0.89768 0.84804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.84 12.76 -35.23 -0.45 -1.29 16 2 C -0.08 -0.01 2.82 36.01 0.10 0.09 16 3 Si 0.69 -0.53 29.79 -169.99 -5.06 -5.59 16 4 C -0.08 -0.07 5.39 -104.64 -0.56 -0.63 16 5 C -0.15 -0.01 8.67 -39.56 -0.34 -0.36 16 6 C -0.07 -0.01 10.04 -39.61 -0.40 -0.41 16 7 C -0.20 -0.21 9.04 -39.43 -0.36 -0.56 16 8 C 0.13 0.26 6.69 -39.22 -0.26 0.00 16 9 O -0.32 -0.50 10.14 -19.42 -0.20 -0.69 16 10 C 0.07 -0.02 4.03 37.16 0.15 0.13 16 11 C -0.14 0.35 6.07 -27.88 -0.17 0.18 16 12 C 0.53 -0.39 7.83 -10.98 -0.09 -0.47 16 13 O -0.54 -1.70 15.58 5.56 0.09 -1.61 16 14 N -0.71 2.11 5.27 -52.92 -0.28 1.84 16 15 C 0.12 -0.31 4.33 -67.02 -0.29 -0.60 16 16 H 0.11 -0.11 7.47 -51.93 -0.39 -0.50 16 17 C -0.13 0.38 7.37 -25.92 -0.19 0.19 16 18 C -0.03 0.05 4.17 -90.96 -0.38 -0.33 16 19 H 0.12 -0.29 8.14 -51.93 -0.42 -0.71 16 20 C 0.22 0.17 7.36 -155.42 -1.14 -0.98 16 21 N -0.49 -1.76 11.25 -10.82 -0.12 -1.88 16 22 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 23 C -0.06 0.02 12.04 -16.56 -0.20 -0.18 16 24 N -0.57 0.60 5.94 -10.23 -0.06 0.54 16 25 C -0.15 0.45 7.36 -25.82 -0.19 0.26 16 26 C -0.13 -0.24 9.55 -39.43 -0.38 -0.61 16 27 H 0.38 -0.45 8.70 45.56 0.40 -0.05 16 28 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 29 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 30 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 31 H 0.13 -0.22 4.87 -52.48 -0.26 -0.48 16 32 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 33 H 0.13 0.00 6.30 -52.49 -0.33 -0.33 16 34 H 0.07 0.00 7.62 -51.93 -0.40 -0.39 16 35 H 0.07 0.01 7.62 -51.93 -0.40 -0.39 16 36 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 38 H 0.41 -2.16 8.70 -40.82 -0.36 -2.52 16 39 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 40 H 0.10 -0.25 8.09 -51.93 -0.42 -0.67 16 41 H 0.17 0.00 8.06 -52.49 -0.42 -0.42 16 42 H 0.18 -0.60 8.06 -52.49 -0.42 -1.03 16 43 H 0.42 -1.60 7.53 -40.82 -0.31 -1.91 16 44 H 0.09 -0.35 6.64 -51.93 -0.34 -0.69 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.13 0.25 8.06 -52.48 -0.42 -0.18 16 LS Contribution 384.01 15.07 5.79 5.79 Total: 0.00 -10.60 384.01 -11.42 -22.02 By element: Atomic # 1 Polarization: -8.35 SS G_CDS: -6.21 Total: -14.57 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -4.91 Total: -4.54 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.46 Total: 0.49 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.56 Total: -3.60 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.06 Total: -5.59 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -10.60 -11.42 -22.02 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.439 kcal (2) G-P(sol) polarization free energy of solvation -10.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.018 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds