Wall clock time and date at job start Sun Mar 7 2021 06:21:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35983 * 117.00445 * 2 1 4 4 C 1.38672 * 120.00071 * 179.97438 * 3 2 1 5 5 C 1.38161 * 119.99679 * 180.02562 * 4 3 2 6 6 C 1.50698 * 119.99649 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.47238 * 104.97559 * 6 5 4 8 8 Si 1.86309 * 109.47348 * 344.97520 * 6 5 4 9 9 C 1.38668 * 119.99942 * 359.97438 * 5 4 3 10 10 O 1.35984 * 119.99699 * 180.02562 * 9 5 4 11 11 C 1.42905 * 116.99835 * 180.02562 * 10 9 5 12 12 C 1.50707 * 109.47006 * 180.02562 * 11 10 9 13 13 O 1.21285 * 119.99651 * 359.97438 * 12 11 10 14 14 N 1.34773 * 119.99920 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00071 * 180.02562 * 14 12 11 16 16 H 1.08999 * 112.84640 * 336.19080 * 15 14 12 17 17 C 1.53778 * 113.69512 * 107.46146 * 15 14 12 18 18 C 1.53784 * 87.08081 * 89.12825 * 17 15 14 19 19 H 1.09004 * 113.61451 * 270.88641 * 18 17 15 20 20 C 1.50692 * 113.61665 * 139.98095 * 18 17 15 21 21 N 1.30499 * 125.65598 * 167.52392 * 20 18 17 22 22 C 1.34124 * 109.26185 * 179.97438 * 21 20 18 23 23 C 1.34671 * 108.01932 * 0.02562 * 22 21 20 24 24 N 1.35047 * 125.64653 * 347.22426 * 20 18 17 25 25 C 1.53778 * 113.61391 * 205.00280 * 15 14 12 26 26 C 1.38721 * 120.00249 * 0.27864 * 9 5 4 27 27 C 1.38104 * 119.99549 * 359.44768 * 26 9 5 28 28 H 1.09000 * 109.47294 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47437 * 300.00315 * 1 2 3 30 30 H 1.09007 * 109.46791 * 59.99713 * 1 2 3 31 31 H 1.07995 * 120.00430 * 359.97438 * 4 3 2 32 32 H 1.09002 * 109.47412 * 224.97496 * 6 5 4 33 33 H 0.96696 * 114.00226 * 59.99802 * 7 6 5 34 34 H 1.48499 * 109.99768 * 178.68456 * 8 6 5 35 35 H 1.48496 * 109.99533 * 300.00189 * 8 6 5 36 36 H 1.08995 * 109.47480 * 60.00041 * 11 10 9 37 37 H 1.09000 * 109.46845 * 299.99855 * 11 10 9 38 38 H 0.97005 * 119.99999 * 359.97438 * 14 12 11 39 39 H 1.08993 * 113.61229 * 334.58149 * 17 15 14 40 40 H 1.09000 * 113.61263 * 203.67798 * 17 15 14 41 41 H 1.08000 * 125.99023 * 180.02562 * 22 21 20 42 42 H 1.07998 * 126.59142 * 179.97438 * 23 22 21 43 43 H 0.97001 * 126.40215 * 359.97438 * 24 20 18 44 44 H 1.08998 * 113.61879 * 156.24852 * 25 15 14 45 45 H 1.08999 * 113.61887 * 25.33959 * 25 15 14 46 46 H 1.08002 * 119.99956 * 179.70065 * 26 9 5 47 47 H 1.08007 * 119.99609 * 180.30050 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 0.0005 5 6 4.0585 2.5151 0.0011 6 6 5.5634 2.5938 0.0011 7 8 6.0209 2.9670 -1.3002 8 14 6.2724 0.9320 0.4557 9 6 3.3033 3.6780 0.0005 10 8 3.9207 4.8896 0.0005 11 6 3.0807 6.0458 0.0005 12 6 3.9350 7.2873 -0.0001 13 8 5.1441 7.1914 0.0000 14 7 3.3555 8.5041 -0.0007 15 6 4.1859 9.7110 -0.0019 16 1 5.1830 9.5390 0.4033 17 6 4.1875 10.4587 -1.3457 18 6 2.9663 11.2352 -0.8255 19 1 2.0145 10.7543 -1.0512 20 6 2.9838 12.6986 -1.1845 21 7 1.9779 13.5221 -1.0700 22 6 2.3552 14.7415 -1.4816 23 6 3.6438 14.6711 -1.8665 24 7 4.0448 13.3766 -1.6729 25 6 3.4833 10.9427 0.5930 26 6 1.9180 3.6055 0.0053 27 6 1.2910 2.3750 -0.0009 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 4.0194 0.3783 0.0014 32 1 5.8883 3.3385 0.7277 33 1 5.6903 3.8239 -1.6027 34 1 7.7560 0.9880 0.4283 35 1 5.8040 0.5326 1.8071 36 1 2.4515 6.0378 0.8905 37 1 2.4515 6.0377 -0.8895 38 1 2.3884 8.5807 -0.0012 39 1 3.9669 9.8200 -2.2009 40 1 5.0689 11.0817 -1.4976 41 1 1.7344 15.6251 -1.5011 42 1 4.2463 15.4811 -2.2500 43 1 4.9259 13.0138 -1.8542 44 1 4.1720 11.6982 0.9711 45 1 2.6941 10.6949 1.3028 46 1 1.3298 4.5113 0.0098 47 1 0.2124 2.3185 -0.0021 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:21:53 Heat of formation + Delta-G solvation = -15.706055 kcal Electronic energy + Delta-G solvation = -31160.375155 eV Core-core repulsion = 26699.069413 eV Total energy + Delta-G solvation = -4461.305743 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.15852 -41.88658 -41.26449 -40.17014 -39.24168 -37.97190 -36.84612 -34.73303 -33.45963 -32.79792 -31.29820 -30.66330 -29.42698 -28.10284 -27.06964 -26.50754 -26.25426 -23.89503 -22.68392 -22.41414 -21.97991 -21.81623 -20.65848 -19.59015 -19.18216 -18.80279 -18.47824 -17.90117 -17.59366 -17.45385 -17.16609 -16.70770 -16.31109 -16.04416 -15.93272 -15.78882 -15.51200 -15.42718 -15.29941 -15.15650 -14.66699 -14.61137 -14.39284 -14.15782 -14.04991 -13.81142 -13.65909 -13.62782 -13.42859 -13.09948 -12.70458 -12.67239 -12.26504 -12.08271 -11.87797 -11.73146 -11.53718 -11.18332 -11.06709 -11.01794 -11.00766 -10.96075 -10.37016 -10.08364 -9.38967 -8.83623 -4.75386 0.06362 0.33502 1.02550 1.26673 1.32156 1.52449 1.77962 2.05855 2.13226 2.13757 2.24408 2.41720 2.54927 3.08300 3.19391 3.27759 3.40156 3.52764 3.55642 3.63104 3.70600 3.78555 3.86577 3.94894 4.06538 4.07274 4.09951 4.10925 4.17133 4.32765 4.32963 4.35950 4.41889 4.43382 4.51700 4.53171 4.57912 4.63553 4.65684 4.75229 4.83335 5.01343 5.08907 5.09729 5.17495 5.26175 5.39117 5.76018 6.02273 6.19197 6.32110 6.37032 6.72601 6.93179 7.10430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.291 6.291 11 C 0.041 3.959 12 C 0.520 3.480 13 O -0.509 6.509 14 N -0.711 5.711 15 C 0.126 3.874 16 H 0.112 0.888 17 C -0.149 4.149 18 C -0.025 4.025 19 H 0.119 0.881 20 C 0.216 3.784 21 N -0.487 5.487 22 C -0.027 4.027 23 C -0.055 4.055 24 N -0.565 5.565 25 C -0.131 4.131 26 C -0.165 4.165 27 C -0.165 4.165 28 H 0.103 0.897 29 H 0.055 0.945 30 H 0.056 0.944 31 H 0.146 0.854 32 H 0.078 0.922 33 H 0.368 0.632 34 H -0.254 1.254 35 H -0.251 1.251 36 H 0.095 0.905 37 H 0.096 0.904 38 H 0.405 0.595 39 H 0.085 0.915 40 H 0.088 0.912 41 H 0.171 0.829 42 H 0.179 0.821 43 H 0.418 0.582 44 H 0.098 0.902 45 H 0.086 0.914 46 H 0.134 0.866 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.633 1.204 -0.925 4.875 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.059 3.941 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.641 3.359 9 C 0.054 3.946 10 O -0.204 6.204 11 C -0.038 4.038 12 C 0.305 3.695 13 O -0.382 6.382 14 N -0.364 5.364 15 C 0.020 3.980 16 H 0.130 0.870 17 C -0.189 4.189 18 C -0.045 4.045 19 H 0.137 0.863 20 C -0.048 4.048 21 N -0.206 5.206 22 C -0.175 4.175 23 C -0.188 4.188 24 N -0.169 5.169 25 C -0.171 4.171 26 C -0.184 4.184 27 C -0.184 4.184 28 H 0.122 0.878 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.164 0.836 32 H 0.096 0.904 33 H 0.216 0.784 34 H -0.179 1.179 35 H -0.175 1.175 36 H 0.113 0.887 37 H 0.114 0.886 38 H 0.240 0.760 39 H 0.103 0.897 40 H 0.107 0.893 41 H 0.189 0.811 42 H 0.196 0.804 43 H 0.256 0.744 44 H 0.117 0.883 45 H 0.105 0.895 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -3.467 -0.200 -0.023 3.472 hybrid contribution -0.358 2.439 -0.159 2.471 sum -3.825 2.239 -0.182 4.436 Atomic orbital electron populations 1.23106 0.78040 1.04415 1.01334 1.86115 1.21561 1.26172 1.88862 1.18814 0.91910 0.84589 0.98815 1.20060 0.91645 0.96773 1.03624 1.19477 0.96600 0.90031 1.03830 1.25366 0.91497 1.12355 0.88799 1.86708 1.73778 1.41900 1.31474 0.93013 0.79758 0.80267 0.82831 1.18644 0.90825 0.84525 1.00597 1.86107 1.33863 1.11076 1.89325 1.22439 0.93114 0.84025 1.04201 1.20043 0.88841 0.84099 0.76539 1.90798 1.14134 1.86454 1.46784 1.45462 1.10329 1.04499 1.76154 1.21780 0.96371 0.83383 0.96445 0.87047 1.23523 0.97596 0.98859 0.98894 1.21073 1.00340 0.86075 0.97005 0.86260 1.22908 0.83621 0.95914 1.02377 1.70235 1.28104 1.01404 1.20867 1.22423 0.94088 0.96412 1.04588 1.22842 0.98600 0.87232 1.10161 1.43271 1.13790 1.09537 1.50300 1.23405 1.00936 0.96683 0.96041 1.21021 0.92806 0.98719 1.05803 1.21088 1.00357 0.91505 1.05422 0.87850 0.92612 0.92523 0.83636 0.90414 0.78408 1.17912 1.17510 0.88705 0.88615 0.76002 0.89677 0.89342 0.81134 0.80426 0.74368 0.88314 0.89501 0.84874 0.84672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.36 10.50 -19.69 -0.21 -0.57 16 3 C 0.10 0.14 6.69 -39.24 -0.26 -0.12 16 4 C -0.10 -0.17 8.59 -39.45 -0.34 -0.51 16 5 C -0.10 -0.22 5.27 -104.49 -0.55 -0.77 16 6 C -0.07 -0.20 2.33 36.00 0.08 -0.12 16 7 O -0.53 -1.93 12.65 -35.23 -0.45 -2.37 16 8 Si 0.74 1.22 30.17 -169.99 -5.13 -3.91 16 9 C 0.10 0.14 6.62 -39.24 -0.26 -0.12 16 10 O -0.29 -0.45 8.56 -39.60 -0.34 -0.78 16 11 C 0.04 -0.09 5.22 36.01 0.19 0.10 16 12 C 0.52 -0.10 7.91 -10.98 -0.09 -0.19 16 13 O -0.51 -2.37 16.10 -14.36 -0.23 -2.60 16 14 N -0.71 2.27 5.27 -53.02 -0.28 1.99 16 15 C 0.13 -0.32 4.32 -67.12 -0.29 -0.61 16 16 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 17 C -0.15 0.47 7.36 -25.92 -0.19 0.28 16 18 C -0.02 0.06 4.17 -90.96 -0.38 -0.32 16 19 H 0.12 -0.35 8.14 -51.93 -0.42 -0.77 16 20 C 0.22 0.12 7.36 -155.42 -1.14 -1.02 16 21 N -0.49 -1.65 11.25 -10.82 -0.12 -1.78 16 22 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 23 C -0.05 0.03 12.04 -16.56 -0.20 -0.17 16 24 N -0.57 0.66 5.94 -10.23 -0.06 0.59 16 25 C -0.13 0.40 7.38 -25.92 -0.19 0.21 16 26 C -0.16 0.09 9.03 -39.45 -0.36 -0.27 16 27 C -0.16 0.04 9.03 -39.45 -0.36 -0.32 16 28 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 29 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 30 H 0.06 -0.18 7.66 -51.92 -0.40 -0.58 16 31 H 0.15 0.01 5.13 -52.49 -0.27 -0.25 16 32 H 0.08 0.28 7.82 -51.93 -0.41 -0.13 16 33 H 0.37 0.80 8.59 45.56 0.39 1.19 16 34 H -0.25 -1.11 7.11 56.52 0.40 -0.71 16 35 H -0.25 -0.71 7.11 56.52 0.40 -0.30 16 36 H 0.10 -0.42 7.65 -51.93 -0.40 -0.82 16 37 H 0.10 -0.45 7.67 -51.93 -0.40 -0.85 16 38 H 0.40 -2.45 8.70 -40.82 -0.36 -2.81 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.09 -0.36 6.64 -51.93 -0.34 -0.70 16 41 H 0.17 -0.03 8.06 -52.49 -0.42 -0.45 16 42 H 0.18 -0.61 8.06 -52.49 -0.42 -1.04 16 43 H 0.42 -1.62 7.53 -40.82 -0.31 -1.93 16 44 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 45 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.13 -0.47 6.29 -52.49 -0.33 -0.80 16 47 H 0.14 -0.34 6.29 -52.48 -0.33 -0.67 16 LS Contribution 391.53 15.07 5.90 5.90 Total: 0.00 -11.79 391.53 -10.55 -22.35 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -6.08 Total: -15.54 kcal Atomic # 6 Polarization: 0.28 SS G_CDS: -3.55 Total: -3.28 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -0.46 Total: 0.81 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -1.22 Total: -6.32 kcal Atomic # 14 Polarization: 1.22 SS G_CDS: -5.13 Total: -3.91 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -11.79 -10.55 -22.35 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.640 kcal (2) G-P(sol) polarization free energy of solvation -11.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.154 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.706 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds